Basic Information | |||
Gene ID | 100750849 | ||
Gene Name | Lhx4 | ||
Full Name | PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]. | ||
Organism | Cricetulus griseus [10029] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003500163 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 159 | 220 | 2.70e-23 | Homeodomain-like |
XP_003500163 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 26 | 93 | 7.50e-18 | Zinc finger, LIM-type |
XP_003500163 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 94 | 145 | 8.10e-15 | Zinc finger, LIM-type |
XP_003500163 | Pfam | PF00046 | IPR001356 | 158 | 214 | 7.90e-21 | Homeobox domain |
XP_003500163 | Pfam | PF00412 | IPR001781 | 30 | 85 | 7.10e-15 | Zinc finger, LIM-type |
XP_003500163 | Pfam | PF00412 | IPR001781 | 89 | 146 | 2.30e-16 | Zinc finger, LIM-type |
XP_003500163 | ProSitePatterns | PS00027 | IPR017970 | 190 | 213 | - | Homeobox, conserved site |
XP_003500163 | ProSitePatterns | PS00478 | IPR001781 | 30 | 64 | - | Zinc finger, LIM-type |
XP_003500163 | ProSitePatterns | PS00478 | IPR001781 | 89 | 124 | - | Zinc finger, LIM-type |
XP_003500163 | ProSiteProfiles | PS50023 | IPR001781 | 28 | 87 | 0.00e-00 | Zinc finger, LIM-type |
XP_003500163 | ProSiteProfiles | PS50023 | IPR001781 | 88 | 150 | 0.00e-00 | Zinc finger, LIM-type |
XP_003500163 | ProSiteProfiles | PS50071 | IPR001356 | 155 | 215 | 0.00e-00 | Homeobox domain |
XP_003500163 | SMART | SM00132 | IPR001781 | 29 | 80 | 1.50e-19 | Zinc finger, LIM-type |
XP_003500163 | SMART | SM00132 | IPR001781 | 88 | 143 | 1.10e-19 | Zinc finger, LIM-type |
XP_003500163 | SMART | SM00389 | IPR001356 | 157 | 219 | 2.30e-25 | Homeobox domain |
XP_003500163 | SUPERFAMILY | SSF46689 | IPR009057 | 148 | 217 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003500163 | PF00412 | 1.2e-31 | LIM | LIM domain |
XP_003500163 | PF00046 | 4.7e-21 | Homeobox | Homeobox domain |
XP_003500163 | PF05920 | 0.00023 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003500163 | GO:0005634 | cellular_component | nucleus |
XP_003500163 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003500163 | GO:0008270 | molecular_function | zinc ion binding |
XP_003500163 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100051084 | 9483 | Callithrix jacchus | 100414118 |
9785 | Loxodonta africana | 100674904 | 8128 | Oreochromis niloticus | 100706090 |
7425 | Nasonia vitripennis | 100120126 | 30195 | Bombus terrestris | 100648335 |
132113 | Bombus impatiens | 100750204 | 7463 | Apis florea | 100868114 |
9597 | Pan paniscus | 100968751 | 9555 | Papio anubis | 101023804 |
9669 | Mustela putorius furo | 101675371 | 8083 | Xiphophorus maculatus | 102219891 |
9031 | Gallus gallus | 776024 | 9606 | Homo sapiens | 89884 |
28377 | Anolis carolinensis | ENSACAG00000000857 | 9615 | Canis familiaris | ENSCAFG00000012750 |
9371 | Echinops telfairi | ENSETEG00000014990 | 8049 | Gadus morhua | ENSGMOG00000013733 |
7897 | Latimeria chalumnae | ENSLACG00000009155 | 9315 | Macropus eugenii | ENSMEUG00000002639 |
30608 | Microcebus murinus | ENSMICG00000017555 | 9813 | Procavia capensis | ENSPCAG00000011090 |
132908 | Pteropus vampyrus | ENSPVAG00000012215 | 10116 | Rattus norvegicus | ENSRNOG00000003595 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000015761 | 9739 | Tursiops truncatus | ENSTTRG00000012291 |
30538 | Vicugna pacos | ENSVPAG00000010060 | 143995 | Megachile rotundata | 100880011 |
34638 | Metaseiulus occidentalis | 100903153 | 39432 | Saimiri boliviensis | 101043410 |
31033 | Takifugu rubripes | 101073088 | 9595 | Gorilla gorilla | 101146924 |
8090 | Oryzias latipes | 101165225 | 59463 | Myotis lucifugus | 102430726 |
7955 | Danio rerio | 571943 | 7668 | Strongylocentrotus purpuratus | 575191 |
7070 | Tribolium castaneum | 662120 | 9358 | Choloepus hoffmanni | ENSCHOG00000012355 |
10020 | Dipodomys ordii | ENSDORG00000014432 | 9365 | Erinaceus europaeus | ENSEEUG00000013869 |
9685 | Felis catus | ENSFCAG00000005479 | 69293 | Gasterosteus aculeatus | ENSGACG00000010846 |
9103 | Meleagris gallopavo | ENSMGAG00000002905 | 9544 | Macaca mulatta | ENSMMUG00000012050 |
13616 | Monodelphis domestica | ENSMODG00000006371 | 61853 | Nomascus leucogenys | ENSNLEG00000015953 |
9258 | Ornithorhynchus anatinus | ENSOANG00000000969 | 9978 | Ochotona princeps | ENSOPRG00000009780 |
13735 | Pelodiscus sinensis | ENSPSIG00000010498 | 9598 | Pan troglodytes | ENSPTRG00000001740 |
9823 | Sus scrofa | ENSSSCG00000015536 | 99883 | Tetraodon nigroviridis | ENSTNIG00000015501 |
8364 | Xenopus tropicalis | ENSXETG00000034077 |