Basic Information | |||
Gene ID | ENSSSCG00000015536 | ||
Gene Name | LHX4 | ||
Full Name | Uncharacterized protein | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | F1S681 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000016472 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 138 | 199 | 2.50e-23 | Homeodomain-like |
ENSSSCP00000016472 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 6 | 73 | 3.80e-18 | Zinc finger, LIM-type |
ENSSSCP00000016472 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 74 | 124 | 1.10e-14 | Zinc finger, LIM-type |
ENSSSCP00000016472 | Pfam | PF00046 | IPR001356 | 137 | 193 | 7.30e-21 | Homeobox domain |
ENSSSCP00000016472 | Pfam | PF00412 | IPR001781 | 68 | 125 | 1.50e-16 | Zinc finger, LIM-type |
ENSSSCP00000016472 | Pfam | PF00412 | IPR001781 | 9 | 64 | 4.30e-15 | Zinc finger, LIM-type |
ENSSSCP00000016472 | ProSitePatterns | PS00027 | IPR017970 | 169 | 192 | - | Homeobox, conserved site |
ENSSSCP00000016472 | ProSitePatterns | PS00478 | IPR001781 | 68 | 103 | - | Zinc finger, LIM-type |
ENSSSCP00000016472 | ProSitePatterns | PS00478 | IPR001781 | 9 | 43 | - | Zinc finger, LIM-type |
ENSSSCP00000016472 | ProSiteProfiles | PS50023 | IPR001781 | 67 | 129 | 0.00e-00 | Zinc finger, LIM-type |
ENSSSCP00000016472 | ProSiteProfiles | PS50023 | IPR001781 | 7 | 66 | 0.00e-00 | Zinc finger, LIM-type |
ENSSSCP00000016472 | ProSiteProfiles | PS50071 | IPR001356 | 134 | 194 | 0.00e-00 | Homeobox domain |
ENSSSCP00000016472 | SMART | SM00132 | IPR001781 | 67 | 122 | 6.60e-19 | Zinc finger, LIM-type |
ENSSSCP00000016472 | SMART | SM00132 | IPR001781 | 8 | 59 | 1.30e-19 | Zinc finger, LIM-type |
ENSSSCP00000016472 | SMART | SM00389 | IPR001356 | 136 | 198 | 2.30e-25 | Homeobox domain |
ENSSSCP00000016472 | SUPERFAMILY | SSF46689 | IPR009057 | 127 | 196 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000016472 | PF00412 | 3.8e-32 | LIM | LIM domain |
ENSSSCP00000016472 | PF00046 | 4.1e-21 | Homeobox | Homeobox domain |
ENSSSCP00000016472 | PF05920 | 0.00019 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSSSCP00000016472 | GO:0005634 | cellular_component | nucleus |
ENSSSCP00000016472 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSSSCP00000016472 | GO:0008270 | molecular_function | zinc ion binding |
ENSSSCP00000016472 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
143995 | Megachile rotundata | 100880011 | 39432 | Saimiri boliviensis | 101043410 |
31033 | Takifugu rubripes | 101073088 | 7955 | Danio rerio | 571943 |
69293 | Gasterosteus aculeatus | ENSGACG00000010846 | 9544 | Macaca mulatta | ENSMMUG00000012050 |
61853 | Nomascus leucogenys | ENSNLEG00000015953 | 9258 | Ornithorhynchus anatinus | ENSOANG00000000969 |
9978 | Ochotona princeps | ENSOPRG00000009780 | 9796 | Equus caballus | 100051084 |
7425 | Nasonia vitripennis | 100120126 | 7029 | Acyrthosiphon pisum | 100164426 |
10224 | Saccoglossus kowalevskii | 100303523 | 9483 | Callithrix jacchus | 100414118 |
9601 | Pongo abelii | 100442936 | 400682 | Amphimedon queenslandica | 100634938 |
30195 | Bombus terrestris | 100648335 | 9785 | Loxodonta africana | 100674904 |
8128 | Oreochromis niloticus | 100706090 | 132113 | Bombus impatiens | 100750204 |
10029 | Cricetulus griseus | 100750849 | 7463 | Apis florea | 100868114 |
34638 | Metaseiulus occidentalis | 100903153 | 9305 | Sarcophilus harrisii | 100929025 |
30611 | Otolemur garnettii | 100944641 | 9597 | Pan paniscus | 100968751 |
9555 | Papio anubis | 101023804 | 9595 | Gorilla gorilla | 101146924 |
8090 | Oryzias latipes | 101165225 | 9669 | Mustela putorius furo | 101675371 |
8083 | Xiphophorus maculatus | 102219891 | 59463 | Myotis lucifugus | 102430726 |
6239 | Caenorhabditis elegans | 181012 | 7227 | Drosophila melanogaster | 35184 |
9913 | Bos taurus | 539213 | 7668 | Strongylocentrotus purpuratus | 575191 |
7070 | Tribolium castaneum | 662120 | 9031 | Gallus gallus | 776024 |
9606 | Homo sapiens | 89884 | 28377 | Anolis carolinensis | ENSACAG00000000857 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000003556 | 9615 | Canis familiaris | ENSCAFG00000012750 |
9358 | Choloepus hoffmanni | ENSCHOG00000012355 | 7719 | Ciona intestinalis | ENSCING00000009072 |
51511 | Ciona savignyi | ENSCSAVG00000000590 | 10020 | Dipodomys ordii | ENSDORG00000014432 |
9365 | Erinaceus europaeus | ENSEEUG00000013869 | 9371 | Echinops telfairi | ENSETEG00000014990 |
9685 | Felis catus | ENSFCAG00000005479 | 8049 | Gadus morhua | ENSGMOG00000013733 |
7897 | Latimeria chalumnae | ENSLACG00000009155 | 9315 | Macropus eugenii | ENSMEUG00000002639 |
9103 | Meleagris gallopavo | ENSMGAG00000002905 | 30608 | Microcebus murinus | ENSMICG00000017555 |
13616 | Monodelphis domestica | ENSMODG00000006371 | 9813 | Procavia capensis | ENSPCAG00000011090 |
13735 | Pelodiscus sinensis | ENSPSIG00000010498 | 9598 | Pan troglodytes | ENSPTRG00000001740 |
132908 | Pteropus vampyrus | ENSPVAG00000002969 | 10116 | Rattus norvegicus | ENSRNOG00000003595 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000015761 | 59729 | Taeniopygia guttata | ENSTGUG00000006385 |
99883 | Tetraodon nigroviridis | ENSTNIG00000015501 | 9739 | Tursiops truncatus | ENSTTRG00000012291 |
30538 | Vicugna pacos | ENSVPAG00000010060 | 8364 | Xenopus tropicalis | ENSXETG00000034077 |