Basic Information | |||
Gene ID | 100968056 | ||
Gene Name | LHX2 | ||
Full Name | PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Pan paniscus]. | ||
Organism | Pan paniscus [9597] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003808118 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 257 | 323 | 9.80e-23 | Homeodomain-like |
XP_003808118 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 113 | 172 | 1.10e-15 | Zinc finger, LIM-type |
XP_003808118 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 50 | 111 | 1.10e-15 | Zinc finger, LIM-type |
XP_003808118 | Pfam | PF00046 | IPR001356 | 267 | 323 | 8.00e-19 | Homeobox domain |
XP_003808118 | Pfam | PF00412 | IPR001781 | 115 | 170 | 1.20e-15 | Zinc finger, LIM-type |
XP_003808118 | Pfam | PF00412 | IPR001781 | 53 | 110 | 6.80e-16 | Zinc finger, LIM-type |
XP_003808118 | ProSitePatterns | PS00027 | IPR017970 | 299 | 322 | - | Homeobox, conserved site |
XP_003808118 | ProSitePatterns | PS00478 | IPR001781 | 115 | 150 | - | Zinc finger, LIM-type |
XP_003808118 | ProSitePatterns | PS00478 | IPR001781 | 53 | 87 | - | Zinc finger, LIM-type |
XP_003808118 | ProSiteProfiles | PS50023 | IPR001781 | 113 | 175 | 0.00e-00 | Zinc finger, LIM-type |
XP_003808118 | ProSiteProfiles | PS50023 | IPR001781 | 51 | 112 | 0.00e-00 | Zinc finger, LIM-type |
XP_003808118 | ProSiteProfiles | PS50071 | IPR001356 | 264 | 324 | 0.00e-00 | Homeobox domain |
XP_003808118 | SMART | SM00132 | IPR001781 | 114 | 168 | 4.60e-19 | Zinc finger, LIM-type |
XP_003808118 | SMART | SM00132 | IPR001781 | 52 | 105 | 2.30e-20 | Zinc finger, LIM-type |
XP_003808118 | SMART | SM00389 | IPR001356 | 266 | 328 | 3.30e-24 | Homeobox domain |
XP_003808118 | SUPERFAMILY | SSF46689 | IPR009057 | 257 | 323 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003808118 | PF00412 | 5.3e-32 | LIM | LIM domain |
XP_003808118 | PF00046 | 4e-19 | Homeobox | Homeobox domain |
XP_003808118 | PF05920 | 2.3e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003808118 | GO:0005634 | cellular_component | nucleus |
XP_003808118 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003808118 | GO:0008270 | molecular_function | zinc ion binding |
XP_003808118 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8364 | Xenopus tropicalis | 100486746 | 13616 | Monodelphis domestica | 100015475 |
9986 | Oryctolagus cuniculus | 100351696 | 8128 | Oreochromis niloticus | 100712145 |
10141 | Cavia porcellus | 100735284 | 34638 | Metaseiulus occidentalis | 100897552 |
9305 | Sarcophilus harrisii | 100915205 | 9555 | Papio anubis | 101010185 |
39432 | Saimiri boliviensis | 101029108 | 31033 | Takifugu rubripes | 101074897 |
9669 | Mustela putorius furo | 101673685 | 43179 | Ictidomys tridecemlineatus | 101970141 |
10090 | Mus musculus | 16870 | 9913 | Bos taurus | 783763 |
9606 | Homo sapiens | 9355 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000011089 |
9483 | Callithrix jacchus | ENSCJAG00000006496 | 10020 | Dipodomys ordii | ENSDORG00000010657 |
9796 | Equus caballus | ENSECAG00000009405 | 9371 | Echinops telfairi | ENSETEG00000012648 |
69293 | Gasterosteus aculeatus | ENSGACG00000003520 | 9031 | Gallus gallus | ENSGALG00000001124 |
8049 | Gadus morhua | ENSGMOG00000012946 | 7897 | Latimeria chalumnae | ENSLACG00000018819 |
9315 | Macropus eugenii | ENSMEUG00000010306 | 30608 | Microcebus murinus | ENSMICG00000009968 |
9258 | Ornithorhynchus anatinus | ENSOANG00000003099 | 30611 | Otolemur garnettii | ENSOGAG00000003505 |
13735 | Pelodiscus sinensis | ENSPSIG00000004916 | 9598 | Pan troglodytes | ENSPTRG00000021351 |
59729 | Taeniopygia guttata | ENSTGUG00000007079 | 99883 | Tetraodon nigroviridis | ENSTNIG00000010590 |
8083 | Xiphophorus maculatus | ENSXMAG00000003908 | 7227 | Drosophila melanogaster | 35509 |
9544 | Macaca mulatta | 694945 | 9595 | Gorilla gorilla | ENSGGOG00000008475 |
9785 | Loxodonta africana | ENSLAFG00000007827 | 59463 | Myotis lucifugus | ENSMLUG00000016917 |
61853 | Nomascus leucogenys | ENSNLEG00000017260 | 9813 | Procavia capensis | ENSPCAG00000005532 |
9739 | Tursiops truncatus | ENSTTRG00000010990 |
Paralogs | |||
100992338 |