Basic Information | |||
Gene ID | 100968700 | ||
Gene Name | TRERF1 | ||
Full Name | PREDICTED: transcriptional-regulating factor 1 isoform 2 [Panpaniscus]. | ||
Organism | Pan paniscus [9597] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003833342 | Pfam | PF01448 | IPR000949 | 801 | 856 | 2.90e-13 | ELM2 domain |
XP_003833342 | ProSitePatterns | PS00028 | IPR007087 | 1035 | 1057 | - | Zinc finger, C2H2 |
XP_003833342 | ProSitePatterns | PS00028 | IPR007087 | 1108 | 1128 | - | Zinc finger, C2H2 |
XP_003833342 | ProSitePatterns | PS00028 | IPR007087 | 513 | 533 | - | Zinc finger, C2H2 |
XP_003833342 | ProSiteProfiles | PS50157 | IPR007087 | 1033 | 1062 | 0.00e-00 | Zinc finger, C2H2 |
XP_003833342 | ProSiteProfiles | PS50157 | IPR007087 | 1106 | 1133 | 0.00e-00 | Zinc finger, C2H2 |
XP_003833342 | ProSiteProfiles | PS50157 | IPR007087 | 511 | 538 | 0.00e-00 | Zinc finger, C2H2 |
XP_003833342 | ProSiteProfiles | PS51156 | IPR000949 | 799 | 890 | 0.00e-00 | ELM2 domain |
XP_003833342 | ProSiteProfiles | PS51293 | IPR017884 | 905 | 956 | 0.00e-00 | SANT domain |
XP_003833342 | SMART | SM00355 | IPR015880 | 1033 | 1057 | 9.30e-06 | Zinc finger, C2H2-like |
XP_003833342 | SMART | SM00355 | IPR015880 | 1106 | 1128 | 3.70e-05 | Zinc finger, C2H2-like |
XP_003833342 | SMART | SM00355 | IPR015880 | 511 | 533 | 4.60e-06 | Zinc finger, C2H2-like |
XP_003833342 | SMART | SM00717 | IPR001005 | 906 | 954 | 1.10e-07 | SANT/Myb domain |
XP_003833342 | SUPERFAMILY | SSF46689 | IPR009057 | 908 | 956 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003833342 | PF01448 | 3.4e-14 | ELM2 | ELM2 domain |
XP_003833342 | PF13912 | 1.8e-07 | zf-C2H2_6 | C2H2-type zinc finger |
XP_003833342 | PF00096 | 9.9e-07 | zf-C2H2 | Zinc finger, C2H2 type |
XP_003833342 | PF13894 | 1.4e-06 | zf-C2H2_4 | C2H2-type zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003833342 | GO:0005634 | cellular_component | nucleus |
XP_003833342 | GO:0003682 | molecular_function | chromatin binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100054606 | 7425 | Nasonia vitripennis | 100123674 |
6087 | Hydra magnipapillata | 100209907 | 30195 | Bombus terrestris | 100650807 |
132113 | Bombus impatiens | 100746455 | 10029 | Cricetulus griseus | 100767482 |
143995 | Megachile rotundata | 100876992 | 59463 | Myotis lucifugus | ENSMLUG00000016748 |
9986 | Oryctolagus cuniculus | ENSOCUG00000016703 | 9813 | Procavia capensis | ENSPCAG00000004099 |
8364 | Xenopus tropicalis | ENSXETG00000000198 | 9555 | Papio anubis | 101003025 |
39432 | Saimiri boliviensis | 101049640 | 9595 | Gorilla gorilla | 101136993 |
9669 | Mustela putorius furo | 101684370 | 13735 | Pelodiscus sinensis | 102445662 |
9606 | Homo sapiens | 55809 | 28377 | Anolis carolinensis | ENSACAG00000001080 |
9913 | Bos taurus | ENSBTAG00000015321 | 9358 | Choloepus hoffmanni | ENSCHOG00000006120 |
9483 | Callithrix jacchus | ENSCJAG00000004347 | 10141 | Cavia porcellus | ENSCPOG00000015717 |
7955 | Danio rerio | ENSDARG00000088631 | 10020 | Dipodomys ordii | ENSDORG00000004758 |
9365 | Erinaceus europaeus | ENSEEUG00000010955 | 9371 | Echinops telfairi | ENSETEG00000006469 |
9685 | Felis catus | ENSFCAG00000011210 | 9031 | Gallus gallus | ENSGALG00000009896 |
7897 | Latimeria chalumnae | ENSLACG00000008926 | 9785 | Loxodonta africana | ENSLAFG00000007825 |
9315 | Macropus eugenii | ENSMEUG00000016251 | 9103 | Meleagris gallopavo | ENSMGAG00000013894 |
30608 | Microcebus murinus | ENSMICG00000011387 | 9544 | Macaca mulatta | ENSMMUG00000005575 |
13616 | Monodelphis domestica | ENSMODG00000019042 | 9258 | Ornithorhynchus anatinus | ENSOANG00000008467 |
30611 | Otolemur garnettii | ENSOGAG00000025610 | 9978 | Ochotona princeps | ENSOPRG00000001486 |
7757 | Petromyzon marinus | ENSPMAG00000000143 | 9601 | Pongo abelii | ENSPPYG00000016614 |
9598 | Pan troglodytes | ENSPTRG00000018170 | 132908 | Pteropus vampyrus | ENSPVAG00000007626 |
42254 | Sorex araneus | ENSSARG00000010589 | 9305 | Sarcophilus harrisii | ENSSHAG00000004599 |
9823 | Sus scrofa | ENSSSCG00000001639 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000022996 |
37347 | Tupaia belangeri | ENSTBEG00000012133 | 59729 | Taeniopygia guttata | ENSTGUG00000003250 |
9478 | Tarsius syrichta | ENSTSYG00000003874 | 9739 | Tursiops truncatus | ENSTTRG00000014065 |
30538 | Vicugna pacos | ENSVPAG00000012254 |