Basic Information | |||
Gene ID | 101049640 | ||
Gene Name | TRERF1 | ||
Full Name | PREDICTED: transcriptional-regulating factor 1 [Saimiri boliviensisboliviensis]. | ||
Organism | Saimiri boliviensis [39432] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003923051 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 984 | 1010 | 1.00e-04 | Zinc finger C2H2-type/integrase DNA-binding domain |
XP_003923051 | Pfam | PF01448 | IPR000949 | 754 | 809 | 2.70e-13 | ELM2 domain |
XP_003923051 | ProSitePatterns | PS00028 | IPR007087 | 1060 | 1080 | - | Zinc finger, C2H2 |
XP_003923051 | ProSitePatterns | PS00028 | IPR007087 | 467 | 487 | - | Zinc finger, C2H2 |
XP_003923051 | ProSitePatterns | PS00028 | IPR007087 | 987 | 1009 | - | Zinc finger, C2H2 |
XP_003923051 | ProSiteProfiles | PS50157 | IPR007087 | 1058 | 1085 | 0.00e-00 | Zinc finger, C2H2 |
XP_003923051 | ProSiteProfiles | PS50157 | IPR007087 | 465 | 492 | 0.00e-00 | Zinc finger, C2H2 |
XP_003923051 | ProSiteProfiles | PS50157 | IPR007087 | 985 | 1014 | 0.00e-00 | Zinc finger, C2H2 |
XP_003923051 | ProSiteProfiles | PS51156 | IPR000949 | 752 | 843 | 0.00e-00 | ELM2 domain |
XP_003923051 | ProSiteProfiles | PS51293 | IPR017884 | 858 | 909 | 0.00e-00 | SANT domain |
XP_003923051 | SMART | SM00355 | IPR015880 | 1058 | 1080 | 3.70e-05 | Zinc finger, C2H2-like |
XP_003923051 | SMART | SM00355 | IPR015880 | 465 | 487 | 4.60e-06 | Zinc finger, C2H2-like |
XP_003923051 | SMART | SM00355 | IPR015880 | 985 | 1009 | 9.30e-06 | Zinc finger, C2H2-like |
XP_003923051 | SMART | SM00717 | IPR001005 | 859 | 907 | 1.10e-07 | SANT/Myb domain |
XP_003923051 | SUPERFAMILY | SSF46689 | IPR009057 | 861 | 909 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003923051 | PF01448 | 3.3e-14 | ELM2 | ELM2 domain |
XP_003923051 | PF13894 | 2.9e-08 | zf-C2H2_4 | C2H2-type zinc finger |
XP_003923051 | PF00096 | 5e-08 | zf-C2H2 | Zinc finger, C2H2 type |
XP_003923051 | PF13912 | 1.6e-07 | zf-C2H2_6 | C2H2-type zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003923051 | GO:0005634 | cellular_component | nucleus |
XP_003923051 | GO:0003682 | molecular_function | chromatin binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100054606 | 7425 | Nasonia vitripennis | 100123674 |
6087 | Hydra magnipapillata | 100209907 | 132113 | Bombus impatiens | 100746455 |
10029 | Cricetulus griseus | 100767482 | 143995 | Megachile rotundata | 100876992 |
9555 | Papio anubis | 101003025 | 9597 | Pan paniscus | 100968700 |
10020 | Dipodomys ordii | ENSDORG00000004758 | 59463 | Myotis lucifugus | ENSMLUG00000016748 |
9986 | Oryctolagus cuniculus | ENSOCUG00000016703 | 9813 | Procavia capensis | ENSPCAG00000004099 |
9598 | Pan troglodytes | ENSPTRG00000018170 | 8364 | Xenopus tropicalis | ENSXETG00000000198 |
9595 | Gorilla gorilla | 101136993 | 9669 | Mustela putorius furo | 101684370 |
13735 | Pelodiscus sinensis | 102445662 | 9606 | Homo sapiens | 55809 |
28377 | Anolis carolinensis | ENSACAG00000001080 | 9913 | Bos taurus | ENSBTAG00000015321 |
9358 | Choloepus hoffmanni | ENSCHOG00000006120 | 9483 | Callithrix jacchus | ENSCJAG00000004347 |
10141 | Cavia porcellus | ENSCPOG00000015717 | 9365 | Erinaceus europaeus | ENSEEUG00000010955 |
9371 | Echinops telfairi | ENSETEG00000006469 | 9685 | Felis catus | ENSFCAG00000011210 |
9031 | Gallus gallus | ENSGALG00000009896 | 7897 | Latimeria chalumnae | ENSLACG00000008926 |
9785 | Loxodonta africana | ENSLAFG00000007825 | 9315 | Macropus eugenii | ENSMEUG00000016251 |
9103 | Meleagris gallopavo | ENSMGAG00000013894 | 30608 | Microcebus murinus | ENSMICG00000011387 |
9544 | Macaca mulatta | ENSMMUG00000005575 | 13616 | Monodelphis domestica | ENSMODG00000019042 |
9258 | Ornithorhynchus anatinus | ENSOANG00000008467 | 30611 | Otolemur garnettii | ENSOGAG00000025610 |
9978 | Ochotona princeps | ENSOPRG00000001486 | 7757 | Petromyzon marinus | ENSPMAG00000000143 |
9601 | Pongo abelii | ENSPPYG00000016614 | 132908 | Pteropus vampyrus | ENSPVAG00000007626 |
42254 | Sorex araneus | ENSSARG00000010589 | 9305 | Sarcophilus harrisii | ENSSHAG00000004599 |
9823 | Sus scrofa | ENSSSCG00000001639 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000022996 |
37347 | Tupaia belangeri | ENSTBEG00000012133 | 59729 | Taeniopygia guttata | ENSTGUG00000003250 |
9478 | Tarsius syrichta | ENSTSYG00000003874 | 9739 | Tursiops truncatus | ENSTTRG00000014065 |
30538 | Vicugna pacos | ENSVPAG00000012254 |