Basic Information | |||
Gene ID | 101162380 | ||
Gene Name | hoxA13a; LOC101162380 | ||
Full Name | HoxA13a | ||
Organism | Oryzias latipes [8090] |
Cross Reference | |||
UniProt | Q3V628 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | ola:101162380 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 8090.ENSORLP00000006355 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSORLP00000006355 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 224 | 290 | 1.90e-23 | Homeodomain-like |
ENSORLP00000006355 | Pfam | PF00046 | IPR001356 | 234 | 290 | 1.80e-18 | Homeobox domain |
ENSORLP00000006355 | Pfam | PF12284 | IPR022067 | 26 | 138 | 1.00e-51 | Homeobox protein Hox1A3 N-terminal |
ENSORLP00000006355 | ProSitePatterns | PS00027 | IPR017970 | 266 | 289 | - | Homeobox, conserved site |
ENSORLP00000006355 | ProSiteProfiles | PS50071 | IPR001356 | 231 | 291 | 0.00e-00 | Homeobox domain |
ENSORLP00000006355 | SMART | SM00389 | IPR001356 | 233 | 295 | 5.30e-25 | Homeobox domain |
ENSORLP00000006355 | SUPERFAMILY | SSF46689 | IPR009057 | 217 | 290 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSORLP00000006355 | PF12284 | 0 | HoxA13_N | Hox protein A13 N terminal |
ENSORLP00000006355 | PF00046 | 1.2e-18 | Homeobox | Homeobox domain |
ENSORLP00000006355 | PF05920 | 0.00067 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSORLP00000006355 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSORLP00000006355 | GO:0005634 | cellular_component | nucleus |
ENSORLP00000006355 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSORLP00000006355 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
13616 | Monodelphis domestica | 100009880 | 9555 | Papio anubis | 100137365 |
9597 | Pan paniscus | 100971738 | 39432 | Saimiri boliviensis | 101051105 |
31033 | Takifugu rubripes | 101069611 | 8128 | Oreochromis niloticus | 100696280 |
9913 | Bos taurus | ENSBTAG00000014735 | 9615 | Canis familiaris | ENSCAFG00000002970 |
9785 | Loxodonta africana | ENSLAFG00000000738 | 9669 | Mustela putorius furo | ENSMPUG00000004851 |
10090 | Mus musculus | ENSMUSG00000038203 | 9986 | Oryctolagus cuniculus | ENSOCUG00000024694 |
9978 | Ochotona princeps | ENSOPRG00000010498 | 9601 | Pongo abelii | ENSPPYG00000017697 |
9305 | Sarcophilus harrisii | ENSSHAG00000016581 | 99883 | Tetraodon nigroviridis | ENSTNIG00000009207 |
8083 | Xiphophorus maculatus | 102227083 | 9606 | Homo sapiens | 3209 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000005877 | 9483 | Callithrix jacchus | ENSCJAG00000008192 |
10141 | Cavia porcellus | ENSCPOG00000024869 | 10020 | Dipodomys ordii | ENSDORG00000006328 |
9371 | Echinops telfairi | ENSETEG00000006794 | 69293 | Gasterosteus aculeatus | ENSGACG00000007134 |
9595 | Gorilla gorilla | ENSGGOG00000005309 | 8049 | Gadus morhua | ENSGMOG00000013892 |
30608 | Microcebus murinus | ENSMICG00000000502 | 59463 | Myotis lucifugus | ENSMLUG00000008332 |
61853 | Nomascus leucogenys | ENSNLEG00000014997 | 9258 | Ornithorhynchus anatinus | ENSOANG00000009173 |
30611 | Otolemur garnettii | ENSOGAG00000028983 | 7757 | Petromyzon marinus | ENSPMAG00000000767 |
10116 | Rattus norvegicus | ENSRNOG00000007928 | 9823 | Sus scrofa | ENSSSCG00000029666 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000029157 |
Paralogs | |||
101158301 |