Basic Information | |||
Gene ID | ENSRNOG00000007928 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Hoxa13; LOC100910298 | ||
Full Name | Protein LOC100910298 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D3ZQ69 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | RGD:1562483 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000010441 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 189 | 257 | 2.40e-23 | Homeodomain-like |
ENSRNOP00000010441 | Pfam | PF00046 | IPR001356 | 200 | 256 | 4.60e-18 | Homeobox domain |
ENSRNOP00000010441 | Pfam | PF12284 | IPR022067 | 5 | 101 | 6.50e-26 | Homeobox protein Hox1A3 N-terminal |
ENSRNOP00000010441 | ProSitePatterns | PS00027 | IPR017970 | 232 | 255 | - | Homeobox, conserved site |
ENSRNOP00000010441 | ProSiteProfiles | PS50071 | IPR001356 | 197 | 257 | 0.00e-00 | Homeobox domain |
ENSRNOP00000010441 | SMART | SM00389 | IPR001356 | 199 | 261 | 4.60e-25 | Homeobox domain |
ENSRNOP00000010441 | SUPERFAMILY | SSF46689 | IPR009057 | 179 | 256 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000010441 | PF12284 | 3.7e-26 | HoxA13_N | Hox protein A13 N terminal |
ENSRNOP00000010441 | PF00046 | 3.1e-18 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000010441 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000010441 | GO:0007275 | biological_process | multicellular organismal development |
ENSRNOP00000010441 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000010441 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000010441 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000010441 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
31033 | Takifugu rubripes | 101069611 | 30608 | Microcebus murinus | ENSMICG00000000502 |
59463 | Myotis lucifugus | ENSMLUG00000008332 | 13616 | Monodelphis domestica | 100009880 |
9555 | Papio anubis | 100137365 | 8128 | Oreochromis niloticus | 100691939 |
39432 | Saimiri boliviensis | 101051105 | 8090 | Oryzias latipes | 101162380 |
8083 | Xiphophorus maculatus | 102227083 | 7897 | Latimeria chalumnae | 102361791 |
13735 | Pelodiscus sinensis | 102462159 | 7955 | Danio rerio | 30438 |
9606 | Homo sapiens | 3209 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000005877 |
9615 | Canis familiaris | ENSCAFG00000002970 | 10020 | Dipodomys ordii | ENSDORG00000006328 |
9796 | Equus caballus | ENSECAG00000014192 | 9685 | Felis catus | ENSFCAG00000028938 |
69293 | Gasterosteus aculeatus | ENSGACG00000007134 | 9595 | Gorilla gorilla | ENSGGOG00000005309 |
8049 | Gadus morhua | ENSGMOG00000013892 | 9785 | Loxodonta africana | ENSLAFG00000000738 |
9544 | Macaca mulatta | ENSMMUG00000013463 | 9669 | Mustela putorius furo | ENSMPUG00000004851 |
10090 | Mus musculus | ENSMUSG00000038203 | 61853 | Nomascus leucogenys | ENSNLEG00000014997 |
9258 | Ornithorhynchus anatinus | ENSOANG00000009173 | 9986 | Oryctolagus cuniculus | ENSOCUG00000024694 |
30611 | Otolemur garnettii | ENSOGAG00000028983 | 9978 | Ochotona princeps | ENSOPRG00000010498 |
9601 | Pongo abelii | ENSPPYG00000017697 | 9305 | Sarcophilus harrisii | ENSSHAG00000016581 |
9823 | Sus scrofa | ENSSSCG00000029666 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000029157 |
99883 | Tetraodon nigroviridis | ENSTNIG00000009207 | 8364 | Xenopus tropicalis | ENSXETG00000000734 |
Paralogs | |||
ENSRNOG00000046614 | ENSRNOG00000047580 |