Basic Information | |||
Gene ID | 1107 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | CHD3 | ||
Full Name | Chromodomain-helicase-DNA-binding protein 3 | ||
Organism | Homo sapiens [9606] |
Cross Reference | |||
UniProt | Q12873 | UniGene | Hs.25601 |
PDB | NULL | OMIM | 602120 |
KEGG | hsa:1107 | UCSC | uc002gjf.2 |
Protein Interactions | |
DIP | DIP-32496N |
IntAct | Q12873 |
MINT | MINT-1185641 |
STRING | 9606.ENSP00000369716 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSP00000369716 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 219 | 267 | 3.50e-05 | High mobility group box domain |
ENSP00000369716 | Gene3D | G3DSA:3.30.40.10 | IPR013083 | 427 | 486 | 1.30e-19 | Zinc finger, RING/FYVE/PHD-type |
ENSP00000369716 | Gene3D | G3DSA:3.30.40.10 | IPR013083 | 497 | 569 | 6.50e-20 | Zinc finger, RING/FYVE/PHD-type |
ENSP00000369716 | PANTHER | PTHR10799:SF464 | IPR028722 | 91 | 1653 | 0.00e-00 | Chromodomain-helicase-DNA-binding protein 3 |
ENSP00000369716 | Pfam | PF00176 | IPR000330 | 798 | 1094 | 2.10e-68 | SNF2-related |
ENSP00000369716 | Pfam | PF00271 | IPR001650 | 1154 | 1233 | 1.10e-15 | Helicase, C-terminal |
ENSP00000369716 | Pfam | PF00385 | IPR023780 | 606 | 629 | 1.70e-04 | Chromo domain |
ENSP00000369716 | Pfam | PF00385 | IPR023780 | 691 | 740 | 6.90e-13 | Chromo domain |
ENSP00000369716 | Pfam | PF00628 | IPR019787 | 440 | 484 | 3.30e-11 | Zinc finger, PHD-finger |
ENSP00000369716 | Pfam | PF00628 | IPR019787 | 517 | 561 | 1.30e-09 | Zinc finger, PHD-finger |
ENSP00000369716 | Pfam | PF06461 | IPR009462 | 1437 | 1576 | 5.00e-65 | Domain of unknown function DUF1086 |
ENSP00000369716 | Pfam | PF06465 | IPR009463 | 1354 | 1416 | 3.40e-25 | Domain of unknown function DUF1087 |
ENSP00000369716 | Pfam | PF08073 | IPR012958 | 206 | 260 | 1.70e-31 | CHD, N-terminal |
ENSP00000369716 | Pfam | PF08074 | IPR012957 | 1794 | 1966 | 1.00e-100 | CHD, C-terminal 2 |
ENSP00000369716 | ProSitePatterns | PS00598 | IPR023779 | 708 | 727 | - | Chromo domain, conserved site |
ENSP00000369716 | ProSitePatterns | PS00690 | IPR002464 | 937 | 946 | - | DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site |
ENSP00000369716 | ProSitePatterns | PS01359 | IPR019786 | 441 | 482 | - | Zinc finger, PHD-type, conserved site |
ENSP00000369716 | ProSitePatterns | PS01359 | IPR019786 | 479 | 559 | - | Zinc finger, PHD-type, conserved site |
ENSP00000369716 | ProSiteProfiles | PS50013 | IPR000953 | 595 | 652 | 0.00e-00 | Chromo domain/shadow |
ENSP00000369716 | ProSiteProfiles | PS50013 | IPR000953 | 690 | 726 | 0.00e-00 | Chromo domain/shadow |
ENSP00000369716 | ProSiteProfiles | PS50016 | IPR019787 | 438 | 485 | 0.00e-00 | Zinc finger, PHD-finger |
ENSP00000369716 | ProSiteProfiles | PS50016 | IPR019787 | 515 | 562 | 0.00e-00 | Zinc finger, PHD-finger |
ENSP00000369716 | ProSiteProfiles | PS51192 | IPR014001 | 807 | 991 | 0.00e-00 | Helicase, superfamily 1/2, ATP-binding domain |
ENSP00000369716 | ProSiteProfiles | PS51194 | IPR001650 | 1123 | 1288 | 0.00e-00 | Helicase, C-terminal |
ENSP00000369716 | SMART | SM00184 | IPR001841 | 441 | 482 | 1.60e-03 | Zinc finger, RING-type |
ENSP00000369716 | SMART | SM00184 | IPR001841 | 518 | 559 | 1.50e-02 | Zinc finger, RING-type |
ENSP00000369716 | SMART | SM00249 | IPR001965 | 440 | 483 | 7.80e-17 | Zinc finger, PHD-type |
ENSP00000369716 | SMART | SM00249 | IPR001965 | 517 | 560 | 8.90e-16 | Zinc finger, PHD-type |
ENSP00000369716 | SMART | SM00298 | IPR000953 | 565 | 644 | 3.50e-16 | Chromo domain/shadow |
ENSP00000369716 | SMART | SM00298 | IPR000953 | 688 | 737 | 3.00e-14 | Chromo domain/shadow |
ENSP00000369716 | SMART | SM00487 | IPR014001 | 791 | 1003 | 5.50e-34 | Helicase, superfamily 1/2, ATP-binding domain |
ENSP00000369716 | SMART | SM00490 | IPR001650 | 1149 | 1233 | 8.30e-28 | Helicase, C-terminal |
ENSP00000369716 | SUPERFAMILY | SSF47095 | IPR009071 | 218 | 257 | 0.00e-00 | High mobility group box domain |
ENSP00000369716 | SUPERFAMILY | SSF52540 | IPR027417 | 1028 | 1303 | 0.00e-00 | P-loop containing nucleoside triphosphate hydrolase |
ENSP00000369716 | SUPERFAMILY | SSF52540 | IPR027417 | 794 | 1026 | 0.00e-00 | P-loop containing nucleoside triphosphate hydrolase |
ENSP00000369716 | SUPERFAMILY | SSF54160 | IPR016197 | 530 | 577 | 0.00e-00 | Chromo domain-like |
ENSP00000369716 | SUPERFAMILY | SSF54160 | IPR016197 | 604 | 650 | 0.00e-00 | Chromo domain-like |
ENSP00000369716 | SUPERFAMILY | SSF54160 | IPR016197 | 670 | 743 | 0.00e-00 | Chromo domain-like |
ENSP00000369716 | SUPERFAMILY | SSF57903 | IPR011011 | 428 | 484 | 0.00e-00 | Zinc finger, FYVE/PHD-type |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSP00000369716 | PF00176 | 0 | SNF2_N | SNF2 family N-terminal domain |
ENSP00000369716 | PF06461 | 0 | DUF1086 | Domain of Unknown Function (DUF1086) |
ENSP00000369716 | PF08074 | 0 | CHDCT2 | CHDCT2 (NUC038) domain |
ENSP00000369716 | PF08073 | 6.3e-32 | CHDNT | CHDNT (NUC034) domain |
ENSP00000369716 | PF06465 | 3.4e-25 | DUF1087 | Domain of Unknown Function (DUF1087) |
ENSP00000369716 | PF00628 | 3.5e-21 | PHD | PHD-finger |
ENSP00000369716 | PF00385 | 3.4e-19 | Chromo | Chromo (CHRromatin Organisation MOdifier) domain |
ENSP00000369716 | PF00271 | 5.3e-16 | Helicase_C | Helicase conserved C-terminal domain |
ENSP00000369716 | PF11496 | 4.5e-10 | HDA2-3 | Class II histone deacetylase complex subunits 2 and 3 |
ENSP00000369716 | PF04851 | 2.7e-05 | ResIII | Type III restriction enzyme, res subunit |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9796 | Equus caballus | 100062897 | 7425 | Nasonia vitripennis | 100117522 |
7029 | Acyrthosiphon pisum | 100162928 | 9823 | Sus scrofa | 100188905 |
6087 | Hydra magnipapillata | 100215182 | 28377 | Anolis carolinensis | 100558283 |
400682 | Amphimedon queenslandica | 100642088 | 30195 | Bombus terrestris | 100643266 |
132113 | Bombus impatiens | 100749786 | 7463 | Apis florea | 100871034 |
143995 | Megachile rotundata | 100879945 | 34638 | Metaseiulus occidentalis | 100901849 |
30611 | Otolemur garnettii | 100963648 | 9597 | Pan paniscus | 100987223 |
9555 | Papio anubis | 101000396 | 39432 | Saimiri boliviensis | 101037818 |
8083 | Xiphophorus maculatus | 102218085 | 7897 | Latimeria chalumnae | 102345306 |
13735 | Pelodiscus sinensis | 102460963 | 6239 | Caenorhabditis elegans | 175944 |
10116 | Rattus norvegicus | 317575 | 7227 | Drosophila melanogaster | 36390 |
9031 | Gallus gallus | 422457 | 9615 | Canis familiaris | 475451 |
7955 | Danio rerio | 559803 | 7668 | Strongylocentrotus purpuratus | 583705 |
7070 | Tribolium castaneum | 660820 | 7719 | Ciona intestinalis | 778936 |
10090 | Mus musculus | 93761 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000017006 |
9913 | Bos taurus | ENSBTAG00000002292 | 9358 | Choloepus hoffmanni | ENSCHOG00000011724 |
10141 | Cavia porcellus | ENSCPOG00000013601 | 51511 | Ciona savignyi | ENSCSAVG00000004620 |
10020 | Dipodomys ordii | ENSDORG00000003466 | 9365 | Erinaceus europaeus | ENSEEUG00000013176 |
9371 | Echinops telfairi | ENSETEG00000017426 | 9685 | Felis catus | ENSFCAG00000018496 |
69293 | Gasterosteus aculeatus | ENSGACG00000017238 | 9595 | Gorilla gorilla | ENSGGOG00000012595 |
8049 | Gadus morhua | ENSGMOG00000007519 | 9785 | Loxodonta africana | ENSLAFG00000000896 |
9315 | Macropus eugenii | ENSMEUG00000001267 | 9103 | Meleagris gallopavo | ENSMGAG00000007042 |
30608 | Microcebus murinus | ENSMICG00000003971 | 59463 | Myotis lucifugus | ENSMLUG00000029614 |
9544 | Macaca mulatta | ENSMMUG00000008818 | 13616 | Monodelphis domestica | ENSMODG00000013187 |
9669 | Mustela putorius furo | ENSMPUG00000017423 | 61853 | Nomascus leucogenys | ENSNLEG00000015179 |
9258 | Ornithorhynchus anatinus | ENSOANG00000002862 | 9986 | Oryctolagus cuniculus | ENSOCUG00000001047 |
9978 | Ochotona princeps | ENSOPRG00000014427 | 9813 | Procavia capensis | ENSPCAG00000014230 |
7757 | Petromyzon marinus | ENSPMAG00000006011 | 9601 | Pongo abelii | ENSPPYG00000015091 |
132908 | Pteropus vampyrus | ENSPVAG00000006482 | 42254 | Sorex araneus | ENSSARG00000005501 |
9305 | Sarcophilus harrisii | ENSSHAG00000013518 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000010683 |
37347 | Tupaia belangeri | ENSTBEG00000014973 | 59729 | Taeniopygia guttata | ENSTGUG00000003899 |
99883 | Tetraodon nigroviridis | ENSTNIG00000017717 | 31033 | Takifugu rubripes | ENSTRUG00000014094 |
9478 | Tarsius syrichta | ENSTSYG00000009954 | 9739 | Tursiops truncatus | ENSTTRG00000006168 |
30538 | Vicugna pacos | ENSVPAG00000008982 | 8364 | Xenopus tropicalis | ENSXETG00000012991 |
9483 | Callithrix jacchus | ENSCJAG00000002868 | 9361 | Dasypus novemcinctus | ENSDNOG00000009158 |
9598 | Pan troglodytes | ENSPTRG00000016472 |