Basic Information
Gene ID 1107 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name CHD3
Full Name Chromodomain-helicase-DNA-binding protein 3
Organism Homo sapiens [9606]

Cross Reference
UniProt Q12873 UniGene Hs.25601
PDB NULL OMIM 602120
KEGG hsa:1107 UCSC uc002gjf.2

Protein Interactions
DIP DIP-32496N
IntAct Q12873
MINT MINT-1185641
STRING 9606.ENSP00000369716

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
ENSEMBL
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSP00000369716 Gene3D G3DSA:1.10.30.10 IPR009071 219 267 3.50e-05 High mobility group box domain
ENSP00000369716 Gene3D G3DSA:3.30.40.10 IPR013083 427 486 1.30e-19 Zinc finger, RING/FYVE/PHD-type
ENSP00000369716 Gene3D G3DSA:3.30.40.10 IPR013083 497 569 6.50e-20 Zinc finger, RING/FYVE/PHD-type
ENSP00000369716 PANTHER PTHR10799:SF464 IPR028722 91 1653 0.00e-00 Chromodomain-helicase-DNA-binding protein 3
ENSP00000369716 Pfam PF00176 IPR000330 798 1094 2.10e-68 SNF2-related
ENSP00000369716 Pfam PF00271 IPR001650 1154 1233 1.10e-15 Helicase, C-terminal
ENSP00000369716 Pfam PF00385 IPR023780 606 629 1.70e-04 Chromo domain
ENSP00000369716 Pfam PF00385 IPR023780 691 740 6.90e-13 Chromo domain
ENSP00000369716 Pfam PF00628 IPR019787 440 484 3.30e-11 Zinc finger, PHD-finger
ENSP00000369716 Pfam PF00628 IPR019787 517 561 1.30e-09 Zinc finger, PHD-finger
ENSP00000369716 Pfam PF06461 IPR009462 1437 1576 5.00e-65 Domain of unknown function DUF1086
ENSP00000369716 Pfam PF06465 IPR009463 1354 1416 3.40e-25 Domain of unknown function DUF1087
ENSP00000369716 Pfam PF08073 IPR012958 206 260 1.70e-31 CHD, N-terminal
ENSP00000369716 Pfam PF08074 IPR012957 1794 1966 1.00e-100 CHD, C-terminal 2
ENSP00000369716 ProSitePatterns PS00598 IPR023779 708 727 - Chromo domain, conserved site
ENSP00000369716 ProSitePatterns PS00690 IPR002464 937 946 - DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
ENSP00000369716 ProSitePatterns PS01359 IPR019786 441 482 - Zinc finger, PHD-type, conserved site
ENSP00000369716 ProSitePatterns PS01359 IPR019786 479 559 - Zinc finger, PHD-type, conserved site
ENSP00000369716 ProSiteProfiles PS50013 IPR000953 595 652 0.00e-00 Chromo domain/shadow
ENSP00000369716 ProSiteProfiles PS50013 IPR000953 690 726 0.00e-00 Chromo domain/shadow
ENSP00000369716 ProSiteProfiles PS50016 IPR019787 438 485 0.00e-00 Zinc finger, PHD-finger
ENSP00000369716 ProSiteProfiles PS50016 IPR019787 515 562 0.00e-00 Zinc finger, PHD-finger
ENSP00000369716 ProSiteProfiles PS51192 IPR014001 807 991 0.00e-00 Helicase, superfamily 1/2, ATP-binding domain
ENSP00000369716 ProSiteProfiles PS51194 IPR001650 1123 1288 0.00e-00 Helicase, C-terminal
ENSP00000369716 SMART SM00184 IPR001841 441 482 1.60e-03 Zinc finger, RING-type
ENSP00000369716 SMART SM00184 IPR001841 518 559 1.50e-02 Zinc finger, RING-type
ENSP00000369716 SMART SM00249 IPR001965 440 483 7.80e-17 Zinc finger, PHD-type
ENSP00000369716 SMART SM00249 IPR001965 517 560 8.90e-16 Zinc finger, PHD-type
ENSP00000369716 SMART SM00298 IPR000953 565 644 3.50e-16 Chromo domain/shadow
ENSP00000369716 SMART SM00298 IPR000953 688 737 3.00e-14 Chromo domain/shadow
ENSP00000369716 SMART SM00487 IPR014001 791 1003 5.50e-34 Helicase, superfamily 1/2, ATP-binding domain
ENSP00000369716 SMART SM00490 IPR001650 1149 1233 8.30e-28 Helicase, C-terminal
ENSP00000369716 SUPERFAMILY SSF47095 IPR009071 218 257 0.00e-00 High mobility group box domain
ENSP00000369716 SUPERFAMILY SSF52540 IPR027417 1028 1303 0.00e-00 P-loop containing nucleoside triphosphate hydrolase
ENSP00000369716 SUPERFAMILY SSF52540 IPR027417 794 1026 0.00e-00 P-loop containing nucleoside triphosphate hydrolase
ENSP00000369716 SUPERFAMILY SSF54160 IPR016197 530 577 0.00e-00 Chromo domain-like
ENSP00000369716 SUPERFAMILY SSF54160 IPR016197 604 650 0.00e-00 Chromo domain-like
ENSP00000369716 SUPERFAMILY SSF54160 IPR016197 670 743 0.00e-00 Chromo domain-like
ENSP00000369716 SUPERFAMILY SSF57903 IPR011011 428 484 0.00e-00 Zinc finger, FYVE/PHD-type

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSP00000369716 PF00176 0 SNF2_N SNF2 family N-terminal domain
ENSP00000369716 PF06461 0 DUF1086 Domain of Unknown Function (DUF1086)
ENSP00000369716 PF08074 0 CHDCT2 CHDCT2 (NUC038) domain
ENSP00000369716 PF08073 6.3e-32 CHDNT CHDNT (NUC034) domain
ENSP00000369716 PF06465 3.4e-25 DUF1087 Domain of Unknown Function (DUF1087)
ENSP00000369716 PF00628 3.5e-21 PHD PHD-finger
ENSP00000369716 PF00385 3.4e-19 Chromo Chromo (CHRromatin Organisation MOdifier) domain
ENSP00000369716 PF00271 5.3e-16 Helicase_C Helicase conserved C-terminal domain
ENSP00000369716 PF11496 4.5e-10 HDA2-3 Class II histone deacetylase complex subunits 2 and 3
ENSP00000369716 PF04851 2.7e-05 ResIII Type III restriction enzyme, res subunit

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9796 Equus caballus 100062897 7425 Nasonia vitripennis 100117522
7029 Acyrthosiphon pisum 100162928 9823 Sus scrofa 100188905
6087 Hydra magnipapillata 100215182 28377 Anolis carolinensis 100558283
400682 Amphimedon queenslandica 100642088 30195 Bombus terrestris 100643266
132113 Bombus impatiens 100749786 7463 Apis florea 100871034
143995 Megachile rotundata 100879945 34638 Metaseiulus occidentalis 100901849
30611 Otolemur garnettii 100963648 9597 Pan paniscus 100987223
9555 Papio anubis 101000396 39432 Saimiri boliviensis 101037818
8083 Xiphophorus maculatus 102218085 7897 Latimeria chalumnae 102345306
13735 Pelodiscus sinensis 102460963 6239 Caenorhabditis elegans 175944
10116 Rattus norvegicus 317575 7227 Drosophila melanogaster 36390
9031 Gallus gallus 422457 9615 Canis familiaris 475451
7955 Danio rerio 559803 7668 Strongylocentrotus purpuratus 583705
7070 Tribolium castaneum 660820 7719 Ciona intestinalis 778936
10090 Mus musculus 93761 9646 Ailuropoda melanoleuca ENSAMEG00000017006
9913 Bos taurus ENSBTAG00000002292 9358 Choloepus hoffmanni ENSCHOG00000011724
10141 Cavia porcellus ENSCPOG00000013601 51511 Ciona savignyi ENSCSAVG00000004620
10020 Dipodomys ordii ENSDORG00000003466 9365 Erinaceus europaeus ENSEEUG00000013176
9371 Echinops telfairi ENSETEG00000017426 9685 Felis catus ENSFCAG00000018496
69293 Gasterosteus aculeatus ENSGACG00000017238 9595 Gorilla gorilla ENSGGOG00000012595
8049 Gadus morhua ENSGMOG00000007519 9785 Loxodonta africana ENSLAFG00000000896
9315 Macropus eugenii ENSMEUG00000001267 9103 Meleagris gallopavo ENSMGAG00000007042
30608 Microcebus murinus ENSMICG00000003971 59463 Myotis lucifugus ENSMLUG00000029614
9544 Macaca mulatta ENSMMUG00000008818 13616 Monodelphis domestica ENSMODG00000013187
9669 Mustela putorius furo ENSMPUG00000017423 61853 Nomascus leucogenys ENSNLEG00000015179
9258 Ornithorhynchus anatinus ENSOANG00000002862 9986 Oryctolagus cuniculus ENSOCUG00000001047
9978 Ochotona princeps ENSOPRG00000014427 9813 Procavia capensis ENSPCAG00000014230
7757 Petromyzon marinus ENSPMAG00000006011 9601 Pongo abelii ENSPPYG00000015091
132908 Pteropus vampyrus ENSPVAG00000006482 42254 Sorex araneus ENSSARG00000005501
9305 Sarcophilus harrisii ENSSHAG00000013518 43179 Ictidomys tridecemlineatus ENSSTOG00000010683
37347 Tupaia belangeri ENSTBEG00000014973 59729 Taeniopygia guttata ENSTGUG00000003899
99883 Tetraodon nigroviridis ENSTNIG00000017717 31033 Takifugu rubripes ENSTRUG00000014094
9478 Tarsius syrichta ENSTSYG00000009954 9739 Tursiops truncatus ENSTTRG00000006168
30538 Vicugna pacos ENSVPAG00000008982 8364 Xenopus tropicalis ENSXETG00000012991
9483 Callithrix jacchus ENSCJAG00000002868 9361 Dasypus novemcinctus ENSDNOG00000009158
9598 Pan troglodytes ENSPTRG00000016472