Basic Information | |||
Gene ID | 171360 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Vsx2; Chx10; rCG_20707 | ||
Full Name | Ceh-10 homeo domain containing homolog (C. elegans), isoform CRA_a | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | G3V7K0 | UniGene | Rn.214211 |
PDB | NULL | OMIM | NULL |
KEGG | rno:171360 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000015889 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 150 | 213 | 8.50e-29 | Homeodomain-like |
ENSRNOP00000015889 | Pfam | PF00046 | IPR001356 | 149 | 205 | 3.40e-23 | Homeobox domain |
ENSRNOP00000015889 | Pfam | PF03826 | IPR003654 | 300 | 318 | 1.10e-06 | OAR domain |
ENSRNOP00000015889 | ProSitePatterns | PS00027 | IPR017970 | 181 | 204 | - | Homeobox, conserved site |
ENSRNOP00000015889 | ProSiteProfiles | PS50071 | IPR001356 | 146 | 206 | 0.00e-00 | Homeobox domain |
ENSRNOP00000015889 | ProSiteProfiles | PS50803 | IPR003654 | 304 | 317 | 0.00e-00 | OAR domain |
ENSRNOP00000015889 | ProSiteProfiles | PS51496 | IPR023339 | 208 | 261 | 0.00e-00 | CVC domain |
ENSRNOP00000015889 | SMART | SM00389 | IPR001356 | 148 | 210 | 1.60e-28 | Homeobox domain |
ENSRNOP00000015889 | SUPERFAMILY | SSF46689 | IPR009057 | 129 | 207 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000015889 | PF00046 | 1.7e-23 | Homeobox | Homeobox domain |
ENSRNOP00000015889 | PF03826 | 5.7e-07 | OAR | OAR domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000015889 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000015889 | GO:0007601 | biological_process | visual perception |
ENSRNOP00000015889 | GO:0050896 | biological_process | response to stimulus |
ENSRNOP00000015889 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000015889 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000015889 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100160822 | 9986 | Oryctolagus cuniculus | 100341299 |
10224 | Saccoglossus kowalevskii | 100378772 | 9483 | Callithrix jacchus | 100411813 |
61853 | Nomascus leucogenys | 100607101 | 30195 | Bombus terrestris | 100650965 |
132113 | Bombus impatiens | 100748956 | 39432 | Saimiri boliviensis | 101037340 |
31033 | Takifugu rubripes | 101064006 | 9595 | Gorilla gorilla | 101145043 |
8090 | Oryzias latipes | 101175530 | 6087 | Hydra magnipapillata | 101235096 |
7425 | Nasonia vitripennis | 100114448 | 10141 | Cavia porcellus | 100732489 |
10029 | Cricetulus griseus | 100752028 | 7463 | Apis florea | 100868741 |
143995 | Megachile rotundata | 100883611 | 34638 | Metaseiulus occidentalis | 100908603 |
9597 | Pan paniscus | 100973335 | 9555 | Papio anubis | 101011444 |
9669 | Mustela putorius furo | 101671063 | 10090 | Mus musculus | 12677 |
9031 | Gallus gallus | 395536 | 7460 | Apis mellifera | 411315 |
7668 | Strongylocentrotus purpuratus | 575706 | 7070 | Tribolium castaneum | 655933 |
9598 | Pan troglodytes | 741063 | 28377 | Anolis carolinensis | ENSACAG00000016343 |
9796 | Equus caballus | ENSECAG00000003028 | 9365 | Erinaceus europaeus | ENSEEUG00000004886 |
9371 | Echinops telfairi | ENSETEG00000017478 | 9685 | Felis catus | ENSFCAG00000018112 |
8049 | Gadus morhua | ENSGMOG00000015880 | 9785 | Loxodonta africana | ENSLAFG00000002863 |
59463 | Myotis lucifugus | ENSMLUG00000010090 | 9544 | Macaca mulatta | ENSMMUG00000029272 |
9978 | Ochotona princeps | ENSOPRG00000004633 | 9813 | Procavia capensis | ENSPCAG00000005632 |
132908 | Pteropus vampyrus | ENSPVAG00000000647 | 9305 | Sarcophilus harrisii | ENSSHAG00000018818 |
9823 | Sus scrofa | ENSSSCG00000002363 | 99883 | Tetraodon nigroviridis | ENSTNIG00000017428 |
30538 | Vicugna pacos | ENSVPAG00000000810 | 8364 | Xenopus tropicalis | ENSXETG00000013302 |
8083 | Xiphophorus maculatus | ENSXMAG00000014488 | 6239 | Caenorhabditis elegans | 175811 |
9913 | Bos taurus | 286802 | 7227 | Drosophila melanogaster | 31469 |
9606 | Homo sapiens | 338917 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000018271 |
9358 | Choloepus hoffmanni | ENSCHOG00000002739 | 9361 | Dasypus novemcinctus | ENSDNOG00000005036 |
10020 | Dipodomys ordii | ENSDORG00000010911 | 69293 | Gasterosteus aculeatus | ENSGACG00000005867 |
7897 | Latimeria chalumnae | ENSLACG00000018477 | 9315 | Macropus eugenii | ENSMEUG00000015436 |
9103 | Meleagris gallopavo | ENSMGAG00000012646 | 30608 | Microcebus murinus | ENSMICG00000008478 |
13616 | Monodelphis domestica | ENSMODG00000006374 | 9258 | Ornithorhynchus anatinus | ENSOANG00000006497 |
30611 | Otolemur garnettii | ENSOGAG00000013552 | 8128 | Oreochromis niloticus | ENSONIG00000007081 |
7757 | Petromyzon marinus | ENSPMAG00000006770 | 13735 | Pelodiscus sinensis | ENSPSIG00000015600 |
42254 | Sorex araneus | ENSSARG00000014036 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000008114 |
59729 | Taeniopygia guttata | ENSTGUG00000012109 | 9478 | Tarsius syrichta | ENSTSYG00000004403 |
9739 | Tursiops truncatus | ENSTTRG00000006446 |