Basic Information
Gene ID 286802
Gene Name VSX1; RINX
Full Name Visual system homeobox 1
Organism Bos taurus [9913]

Cross Reference
UniProt Q9GMA3 UniGene Bt.5555
PDB NULL OMIM NULL
KEGG bta:286802 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 9913.ENSBTAP00000004329

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSBTAP00000004329 Gene3D G3DSA:1.10.10.60 IPR009057 159 227 7.00e-30 Homeodomain-like
ENSBTAP00000004329 Pfam PF00046 IPR001356 165 221 2.10e-23 Homeobox domain
ENSBTAP00000004329 ProSitePatterns PS00027 IPR017970 197 220 - Homeobox, conserved site
ENSBTAP00000004329 ProSiteProfiles PS50071 IPR001356 162 222 0.00e-00 Homeobox domain
ENSBTAP00000004329 ProSiteProfiles PS51496 IPR023339 224 277 0.00e-00 CVC domain
ENSBTAP00000004329 SMART SM00389 IPR001356 164 226 2.90e-28 Homeobox domain
ENSBTAP00000004329 SUPERFAMILY SSF46689 IPR009057 144 224 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSBTAP00000004329 PF00046 1.3e-23 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSBTAP00000004329 GO:0006351 biological_process transcription, DNA-templated
ENSBTAP00000004329 GO:0007601 biological_process visual perception
ENSBTAP00000004329 GO:0050896 biological_process response to stimulus
ENSBTAP00000004329 GO:0060040 biological_process retinal bipolar neuron differentiation
ENSBTAP00000004329 GO:0005634 cellular_component nucleus
ENSBTAP00000004329 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSBTAP00000004329 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100160822 10224 Saccoglossus kowalevskii 100378772
9483 Callithrix jacchus 100411813 30195 Bombus terrestris 100650965
132113 Bombus impatiens 100748956 10029 Cricetulus griseus 100769470
9597 Pan paniscus 100991250 9555 Papio anubis 101026347
39432 Saimiri boliviensis 101037340 9685 Felis catus 101090343
8090 Oryzias latipes 101175530 6087 Hydra magnipapillata 101235096
43179 Ictidomys tridecemlineatus 101961651 7897 Latimeria chalumnae 102355593
10090 Mus musculus 114889 6239 Caenorhabditis elegans 175811
7425 Nasonia vitripennis 100114448 400682 Amphimedon queenslandica 100640121
7463 Apis florea 100868741 143995 Megachile rotundata 100883611
34638 Metaseiulus occidentalis 100908603 31033 Takifugu rubripes 101076798
9595 Gorilla gorilla 101124735 9669 Mustela putorius furo 101675354
10116 Rattus norvegicus 171360 7460 Apis mellifera 411315
7668 Strongylocentrotus purpuratus 575706 7070 Tribolium castaneum 655933
9598 Pan troglodytes 741063 9796 Equus caballus ENSECAG00000003028
9365 Erinaceus europaeus ENSEEUG00000004886 9371 Echinops telfairi ENSETEG00000017478
69293 Gasterosteus aculeatus ENSGACG00000012138 9031 Gallus gallus ENSGALG00000029057
9315 Macropus eugenii ENSMEUG00000003138 59463 Myotis lucifugus ENSMLUG00000007341
9544 Macaca mulatta ENSMMUG00000020600 61853 Nomascus leucogenys ENSNLEG00000015558
9813 Procavia capensis ENSPCAG00000005632 13735 Pelodiscus sinensis ENSPSIG00000003555
132908 Pteropus vampyrus ENSPVAG00000000647 9305 Sarcophilus harrisii ENSSHAG00000017959
59729 Taeniopygia guttata ENSTGUG00000005139 9739 Tursiops truncatus ENSTTRG00000001632
30538 Vicugna pacos ENSVPAG00000000810 8364 Xenopus tropicalis ENSXETG00000013302
8083 Xiphophorus maculatus ENSXMAG00000014488 7227 Drosophila melanogaster 31469
9606 Homo sapiens 338917 28377 Anolis carolinensis ENSACAG00000013710
9646 Ailuropoda melanoleuca ENSAMEG00000018271 9358 Choloepus hoffmanni ENSCHOG00000002739
10141 Cavia porcellus ENSCPOG00000003951 9361 Dasypus novemcinctus ENSDNOG00000002981
10020 Dipodomys ordii ENSDORG00000005490 8049 Gadus morhua ENSGMOG00000017612
9785 Loxodonta africana ENSLAFG00000018392 9103 Meleagris gallopavo ENSMGAG00000007153
30608 Microcebus murinus ENSMICG00000002047 13616 Monodelphis domestica ENSMODG00000006374
9258 Ornithorhynchus anatinus ENSOANG00000006497 9986 Oryctolagus cuniculus ENSOCUG00000017055
30611 Otolemur garnettii ENSOGAG00000008500 8128 Oreochromis niloticus ENSONIG00000007081
9978 Ochotona princeps ENSOPRG00000001494 7757 Petromyzon marinus ENSPMAG00000006770
42254 Sorex araneus ENSSARG00000013745 9823 Sus scrofa ENSSSCG00000023887
37347 Tupaia belangeri ENSTBEG00000014757 99883 Tetraodon nigroviridis ENSTNIG00000013369
9478 Tarsius syrichta ENSTSYG00000004403