Basic Information
Gene ID 288906 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Rfx1; Rfx1_predicted; rCG_51209
Full Name Protein Rfx1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZQ82 UniGene Rn.154447
PDB NULL OMIM NULL
KEGG rno:288906 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000008104 Gene3D G3DSA:1.10.10.10 IPR011991 424 498 1.70e-40 Winged helix-turn-helix DNA-binding domain
ENSRNOP00000008104 Pfam PF02257 IPR003150 421 500 1.40e-36 DNA-binding RFX-type winged-helix domain
ENSRNOP00000008104 Pfam PF04589 IPR007668 209 367 1.60e-52 RFX1 transcription activation region
ENSRNOP00000008104 ProSiteProfiles PS51526 IPR003150 424 499 0.00e-00 DNA-binding RFX-type winged-helix domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000008104 PF04589 0 RFX1_trans_act RFX1 transcription activation region
ENSRNOP00000008104 PF02257 4.9e-37 RFX_DNA_binding RFX DNA-binding domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000008104 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000008104 GO:0005634 cellular_component nucleus
ENSRNOP00000008104 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
39432 Saimiri boliviensis 101037994 9986 Oryctolagus cuniculus 100009410
7425 Nasonia vitripennis 100121130 7029 Acyrthosiphon pisum 100159044
6087 Hydra magnipapillata 100203968 10224 Saccoglossus kowalevskii 100372282
9823 Sus scrofa 100511439 400682 Amphimedon queenslandica 100638336
30195 Bombus terrestris 100642228 132113 Bombus impatiens 100749382
10029 Cricetulus griseus 100767562 7463 Apis florea 100864431
143995 Megachile rotundata 100876007 34638 Metaseiulus occidentalis 100908403
9597 Pan paniscus 100993917 9555 Papio anubis 101017476
9595 Gorilla gorilla 101129297 10090 Mus musculus 19724
9615 Canis familiaris 484908 7668 Strongylocentrotus purpuratus 586051
9606 Homo sapiens 5991 7070 Tribolium castaneum 664071
28377 Anolis carolinensis ENSACAG00000015671 9646 Ailuropoda melanoleuca ENSAMEG00000013075
9913 Bos taurus ENSBTAG00000008854 9358 Choloepus hoffmanni ENSCHOG00000008113
7719 Ciona intestinalis ENSCING00000009186 9483 Callithrix jacchus ENSCJAG00000004970
10141 Cavia porcellus ENSCPOG00000010089 51511 Ciona savignyi ENSCSAVG00000006455
10020 Dipodomys ordii ENSDORG00000016506 9796 Equus caballus ENSECAG00000016589
9365 Erinaceus europaeus ENSEEUG00000013595 9371 Echinops telfairi ENSETEG00000003677
69293 Gasterosteus aculeatus ENSGACG00000012429 8049 Gadus morhua ENSGMOG00000008963
7897 Latimeria chalumnae ENSLACG00000022433 9785 Loxodonta africana ENSLAFG00000010160
9315 Macropus eugenii ENSMEUG00000009014 9103 Meleagris gallopavo ENSMGAG00000001572
30608 Microcebus murinus ENSMICG00000012036 59463 Myotis lucifugus ENSMLUG00000013002
9544 Macaca mulatta ENSMMUG00000018966 61853 Nomascus leucogenys ENSNLEG00000015842
9258 Ornithorhynchus anatinus ENSOANG00000014996 30611 Otolemur garnettii ENSOGAG00000007762
8128 Oreochromis niloticus ENSONIG00000002158 9978 Ochotona princeps ENSOPRG00000003641
8090 Oryzias latipes ENSORLG00000010273 7757 Petromyzon marinus ENSPMAG00000002263
9601 Pongo abelii ENSPPYG00000009631 13735 Pelodiscus sinensis ENSPSIG00000016113
9598 Pan troglodytes ENSPTRG00000010352 132908 Pteropus vampyrus ENSPVAG00000017549
42254 Sorex araneus ENSSARG00000013845 43179 Ictidomys tridecemlineatus ENSSTOG00000025432
37347 Tupaia belangeri ENSTBEG00000014646 59729 Taeniopygia guttata ENSTGUG00000000369
99883 Tetraodon nigroviridis ENSTNIG00000003294 31033 Takifugu rubripes ENSTRUG00000012387
9478 Tarsius syrichta ENSTSYG00000006974 9739 Tursiops truncatus ENSTTRG00000008377
30538 Vicugna pacos ENSVPAG00000005472 8364 Xenopus tropicalis ENSXETG00000005567
8083 Xiphophorus maculatus ENSXMAG00000014267 7955 Danio rerio ENSDARG00000005883
9685 Felis catus ENSFCAG00000003721 13616 Monodelphis domestica ENSMODG00000012044
9669 Mustela putorius furo ENSMPUG00000003132 9813 Procavia capensis ENSPCAG00000010006
9305 Sarcophilus harrisii ENSSHAG00000009998