Basic Information | |||
Gene ID | ENSXETG00000005567 | ||
Gene Name | rfx1 | ||
Full Name | Uncharacterized protein | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | F6WM24 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000012247 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 360 | 434 | 1.50e-40 | Winged helix-turn-helix DNA-binding domain |
ENSXETP00000012247 | Pfam | PF02257 | IPR003150 | 357 | 436 | 1.30e-36 | DNA-binding RFX-type winged-helix domain |
ENSXETP00000012247 | Pfam | PF04589 | IPR007668 | 168 | 321 | 6.70e-38 | RFX1 transcription activation region |
ENSXETP00000012247 | ProSiteProfiles | PS51526 | IPR003150 | 360 | 435 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000012247 | PF04589 | 6.7e-38 | RFX1_trans_act | RFX1 transcription activation region |
ENSXETP00000012247 | PF02257 | 3.3e-37 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000012247 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSXETP00000012247 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000012247 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7029 | Acyrthosiphon pisum | 100159044 | 400682 | Amphimedon queenslandica | 100638336 |
34638 | Metaseiulus occidentalis | 100908403 | 9597 | Pan paniscus | 100993917 |
9555 | Papio anubis | 101017476 | 39432 | Saimiri boliviensis | 101037994 |
9595 | Gorilla gorilla | 101129297 | 10090 | Mus musculus | 19724 |
10116 | Rattus norvegicus | 288906 | 7227 | Drosophila melanogaster | 41266 |
9615 | Canis familiaris | 484908 | 28377 | Anolis carolinensis | ENSACAG00000015671 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000013075 | 9483 | Callithrix jacchus | ENSCJAG00000004970 |
10141 | Cavia porcellus | ENSCPOG00000010089 | 51511 | Ciona savignyi | ENSCSAVG00000006455 |
7955 | Danio rerio | ENSDARG00000005883 | 10020 | Dipodomys ordii | ENSDORG00000016506 |
9685 | Felis catus | ENSFCAG00000003721 | 69293 | Gasterosteus aculeatus | ENSGACG00000012429 |
7897 | Latimeria chalumnae | ENSLACG00000022433 | 9785 | Loxodonta africana | ENSLAFG00000010160 |
9315 | Macropus eugenii | ENSMEUG00000009014 | 30608 | Microcebus murinus | ENSMICG00000012036 |
13616 | Monodelphis domestica | ENSMODG00000012044 | 9669 | Mustela putorius furo | ENSMPUG00000003132 |
9978 | Ochotona princeps | ENSOPRG00000003641 | 9813 | Procavia capensis | ENSPCAG00000010006 |
9601 | Pongo abelii | ENSPPYG00000009631 | 9305 | Sarcophilus harrisii | ENSSHAG00000009998 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000025432 | 99883 | Tetraodon nigroviridis | ENSTNIG00000003294 |
6087 | Hydra magnipapillata | 100203968 | 9823 | Sus scrofa | 100511439 |
10029 | Cricetulus griseus | 100767562 | 9796 | Equus caballus | ENSECAG00000016589 |
9371 | Echinops telfairi | ENSETEG00000003677 | 8049 | Gadus morhua | ENSGMOG00000008963 |
59463 | Myotis lucifugus | ENSMLUG00000013002 | 8128 | Oreochromis niloticus | ENSONIG00000002158 |
8090 | Oryzias latipes | ENSORLG00000010273 | 13735 | Pelodiscus sinensis | ENSPSIG00000016113 |
132908 | Pteropus vampyrus | ENSPVAG00000017549 | 37347 | Tupaia belangeri | ENSTBEG00000014646 |
31033 | Takifugu rubripes | ENSTRUG00000012387 | 9739 | Tursiops truncatus | ENSTTRG00000008377 |
8083 | Xiphophorus maculatus | ENSXMAG00000014267 |