Basic Information
Gene ID 299138 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Six4; Six4_predicted; rCG_61864
Full Name Protein Six4
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZAJ7 UniGene Rn.12316
PDB NULL OMIM NULL
KEGG rno:299138 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000050667 Gene3D G3DSA:1.10.10.60 IPR009057 149 217 4.70e-21 Homeodomain-like
ENSRNOP00000050667 Pfam PF00046 IPR001356 153 202 6.80e-14 Homeobox domain
ENSRNOP00000050667 ProSitePatterns PS00027 IPR017970 179 202 - Homeobox, conserved site
ENSRNOP00000050667 ProSiteProfiles PS50071 IPR001356 153 204 0.00e-00 Homeobox domain
ENSRNOP00000050667 SMART SM00389 IPR001356 146 208 3.00e-19 Homeobox domain
ENSRNOP00000050667 SUPERFAMILY SSF46689 IPR009057 144 211 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000050667 PF00046 3.1e-14 Homeobox Homeobox domain
ENSRNOP00000050667 PF05920 3.3e-08 Homeobox_KN Homeobox KN domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000050667 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000050667 GO:0005634 cellular_component nucleus
ENSRNOP00000050667 GO:0005737 cellular_component cytoplasm
ENSRNOP00000050667 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000050667 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9601 Pongo abelii 100447626 9555 Papio anubis 101026097
7029 Acyrthosiphon pisum 100169467 10224 Saccoglossus kowalevskii 100373027
30195 Bombus terrestris 100645933 143995 Megachile rotundata 100883606
9597 Pan paniscus 100981746 39432 Saimiri boliviensis 101041811
43179 Ictidomys tridecemlineatus 101969000 9031 Gallus gallus 395601
7668 Strongylocentrotus purpuratus 576184 7955 Danio rerio 65233
7070 Tribolium castaneum 657176 7460 Apis mellifera 724796
9646 Ailuropoda melanoleuca ENSAMEG00000002968 9358 Choloepus hoffmanni ENSCHOG00000005951
9483 Callithrix jacchus ENSCJAG00000019133 10141 Cavia porcellus ENSCPOG00000014392
8049 Gadus morhua ENSGMOG00000010829 7897 Latimeria chalumnae ENSLACG00000018526
9785 Loxodonta africana ENSLAFG00000021577 9315 Macropus eugenii ENSMEUG00000015192
9103 Meleagris gallopavo ENSMGAG00000013569 30608 Microcebus murinus ENSMICG00000003524
9544 Macaca mulatta ENSMMUG00000001640 13616 Monodelphis domestica ENSMODG00000008646
61853 Nomascus leucogenys ENSNLEG00000013777 30611 Otolemur garnettii ENSOGAG00000016082
8128 Oreochromis niloticus ENSONIG00000020117 9978 Ochotona princeps ENSOPRG00000011678
9813 Procavia capensis ENSPCAG00000014927 13735 Pelodiscus sinensis ENSPSIG00000014533
9598 Pan troglodytes ENSPTRG00000006411 9305 Sarcophilus harrisii ENSSHAG00000016030
99883 Tetraodon nigroviridis ENSTNIG00000017344 31033 Takifugu rubripes ENSTRUG00000010704
9478 Tarsius syrichta ENSTSYG00000001908 8364 Xenopus tropicalis ENSXETG00000016941
8083 Xiphophorus maculatus ENSXMAG00000013480 9615 Canis familiaris 490720
69293 Gasterosteus aculeatus ENSGACG00000008440 8090 Oryzias latipes ENSORLG00000015756

Paralogs
114634 ENSRNOG00000024511