Basic Information | |||
Gene ID | 303226 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Znf18; Zfp18, Zfp535 | ||
Full Name | Zinc finger protein 18 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q642B9 | UniGene | Rn.93963 |
PDB | NULL | OMIM | NULL |
KEGG | rno:303226 | UCSC | RGD:1305130 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000005518 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000005518 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 416 | 441 | 1.70e-10 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000005518 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 443 | 472 | 6.20e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000005518 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 473 | 497 | 1.30e-13 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000005518 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 498 | 518 | 4.00e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000005518 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 519 | 553 | 1.80e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000005518 | PANTHER | PTHR10032 | IPR027775 | 1 | 555 | 0.00e-00 | C2H2- zinc finger protein family |
ENSRNOP00000005518 | PANTHER | PTHR10032:SF11 | IPR027764 | 1 | 555 | 0.00e-00 | Zinc finger protein 18 |
ENSRNOP00000005518 | Pfam | PF01352 | IPR001909 | 229 | 256 | 7.80e-08 | Krueppel-associated box |
ENSRNOP00000005518 | Pfam | PF02023 | IPR003309 | 36 | 129 | 5.70e-40 | Transcription regulator SCAN |
ENSRNOP00000005518 | ProSitePatterns | PS00028 | IPR007087 | 417 | 437 | - | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSitePatterns | PS00028 | IPR007087 | 445 | 465 | - | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSitePatterns | PS00028 | IPR007087 | 471 | 493 | - | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSitePatterns | PS00028 | IPR007087 | 501 | 521 | - | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSitePatterns | PS00028 | IPR007087 | 529 | 549 | - | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSiteProfiles | PS50157 | IPR007087 | 415 | 442 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSiteProfiles | PS50157 | IPR007087 | 443 | 470 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSiteProfiles | PS50157 | IPR007087 | 471 | 498 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSiteProfiles | PS50157 | IPR007087 | 499 | 526 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSiteProfiles | PS50157 | IPR007087 | 527 | 554 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000005518 | ProSiteProfiles | PS50804 | IPR003309 | 41 | 120 | 0.00e-00 | Transcription regulator SCAN |
ENSRNOP00000005518 | ProSiteProfiles | PS50805 | IPR001909 | 218 | 291 | 0.00e-00 | Krueppel-associated box |
ENSRNOP00000005518 | SMART | SM00349 | IPR001909 | 225 | 280 | 2.80e-05 | Krueppel-associated box |
ENSRNOP00000005518 | SMART | SM00355 | IPR015880 | 415 | 437 | 3.70e-04 | Zinc finger, C2H2-like |
ENSRNOP00000005518 | SMART | SM00355 | IPR015880 | 443 | 465 | 8.00e-05 | Zinc finger, C2H2-like |
ENSRNOP00000005518 | SMART | SM00355 | IPR015880 | 471 | 493 | 5.70e-05 | Zinc finger, C2H2-like |
ENSRNOP00000005518 | SMART | SM00355 | IPR015880 | 499 | 521 | 8.30e-08 | Zinc finger, C2H2-like |
ENSRNOP00000005518 | SMART | SM00355 | IPR015880 | 527 | 549 | 4.50e-07 | Zinc finger, C2H2-like |
ENSRNOP00000005518 | SMART | SM00431 | IPR003309 | 37 | 149 | 9.10e-62 | Transcription regulator SCAN |
ENSRNOP00000005518 | SUPERFAMILY | SSF109640 | IPR001909 | 228 | 274 | 0.00e-00 | Krueppel-associated box |
ENSRNOP00000005518 | SUPERFAMILY | SSF47353 | IPR008916 | 36 | 123 | 0.00e-00 | Retrovirus capsid, C-terminal |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000005518 | PF02023 | 2.5e-40 | SCAN | SCAN domain |
ENSRNOP00000005518 | PF13465 | 1.4e-33 | zf-H2C2_2 | Zinc-finger double domain |
ENSRNOP00000005518 | PF00096 | 3.9e-25 | zf-C2H2 | Zinc finger, C2H2 type |
ENSRNOP00000005518 | PF13894 | 6.5e-15 | zf-C2H2_4 | C2H2-type zinc finger |
ENSRNOP00000005518 | PF01352 | 2.3e-08 | KRAB | KRAB box |
ENSRNOP00000005518 | PF12171 | 4.1e-08 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSRNOP00000005518 | PF05605 | 0.00028 | zf-Di19 | Drought induced 19 protein (Di19), zinc-binding |
ENSRNOP00000005518 | PF13912 | 0.00073 | zf-C2H2_6 | C2H2-type zinc finger |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000005518 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000005518 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000005518 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9669 | Mustela putorius furo | 101673786 | 9483 | Callithrix jacchus | 100386522 |
10029 | Cricetulus griseus | 100768111 | 30611 | Otolemur garnettii | 100946405 |
9597 | Pan paniscus | 100991178 | 9555 | Papio anubis | 101015083 |
39432 | Saimiri boliviensis | 101037259 | 9615 | Canis familiaris | 479505 |
9606 | Homo sapiens | 7566 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000013156 |
10141 | Cavia porcellus | ENSCPOG00000012793 | 9796 | Equus caballus | ENSECAG00000025164 |
9365 | Erinaceus europaeus | ENSEEUG00000011943 | 9371 | Echinops telfairi | ENSETEG00000000611 |
9685 | Felis catus | ENSFCAG00000027934 | 9595 | Gorilla gorilla | ENSGGOG00000005431 |
9785 | Loxodonta africana | ENSLAFG00000009028 | 59463 | Myotis lucifugus | ENSMLUG00000022865 |
9544 | Macaca mulatta | ENSMMUG00000018541 | 9986 | Oryctolagus cuniculus | ENSOCUG00000010095 |
9978 | Ochotona princeps | ENSOPRG00000011305 | 9813 | Procavia capensis | ENSPCAG00000002958 |
132908 | Pteropus vampyrus | ENSPVAG00000014085 | 42254 | Sorex araneus | ENSSARG00000003073 |
9823 | Sus scrofa | ENSSSCG00000018014 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000012652 |
37347 | Tupaia belangeri | ENSTBEG00000007103 | 9478 | Tarsius syrichta | ENSTSYG00000006855 |
30538 | Vicugna pacos | ENSVPAG00000007132 | 10090 | Mus musculus | 52712 |
9913 | Bos taurus | ENSBTAG00000004675 | 9358 | Choloepus hoffmanni | ENSCHOG00000001767 |
10020 | Dipodomys ordii | ENSDORG00000012359 | 30608 | Microcebus murinus | ENSMICG00000016196 |
13616 | Monodelphis domestica | ENSMODG00000000157 | 9305 | Sarcophilus harrisii | ENSSHAG00000004742 |
9739 | Tursiops truncatus | ENSTTRG00000012317 |