Basic Information | |||
Gene ID | 30399 | ||
Gene Name | ntla; ntl, t | ||
Full Name | Brachyury protein homolog A | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q07998 | UniGene | Dr.1468 |
PDB | NULL | OMIM | NULL |
KEGG | dre:30399 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000005351 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000005351 | Gene3D | G3DSA:2.60.40.820 | IPR001699 | 33 | 216 | 5.30e-83 | Transcription factor, T-box |
ENSDARP00000005351 | PANTHER | PTHR11267 | IPR001699 | 3 | 391 | 0.00e-00 | Transcription factor, T-box |
ENSDARP00000005351 | Pfam | PF00907 | IPR001699 | 37 | 212 | 2.20e-82 | Transcription factor, T-box |
ENSDARP00000005351 | PRINTS | PR00937 | IPR001699 | 117 | 130 | 3.60e-44 | Transcription factor, T-box |
ENSDARP00000005351 | PRINTS | PR00937 | IPR001699 | 134 | 143 | 3.60e-44 | Transcription factor, T-box |
ENSDARP00000005351 | PRINTS | PR00937 | IPR001699 | 152 | 166 | 3.60e-44 | Transcription factor, T-box |
ENSDARP00000005351 | PRINTS | PR00937 | IPR001699 | 183 | 196 | 3.60e-44 | Transcription factor, T-box |
ENSDARP00000005351 | PRINTS | PR00937 | IPR001699 | 204 | 212 | 3.60e-44 | Transcription factor, T-box |
ENSDARP00000005351 | PRINTS | PR00937 | IPR001699 | 52 | 76 | 3.60e-44 | Transcription factor, T-box |
ENSDARP00000005351 | PRINTS | PR00938 | IPR002070 | 12 | 37 | 1.00e-50 | Transcription factor, Brachyury |
ENSDARP00000005351 | PRINTS | PR00938 | IPR002070 | 157 | 174 | 1.00e-50 | Transcription factor, Brachyury |
ENSDARP00000005351 | PRINTS | PR00938 | IPR002070 | 208 | 218 | 1.00e-50 | Transcription factor, Brachyury |
ENSDARP00000005351 | PRINTS | PR00938 | IPR002070 | 269 | 284 | 1.00e-50 | Transcription factor, Brachyury |
ENSDARP00000005351 | PRINTS | PR00938 | IPR002070 | 97 | 117 | 1.00e-50 | Transcription factor, Brachyury |
ENSDARP00000005351 | ProSitePatterns | PS01264 | IPR018186 | 118 | 136 | - | Transcription factor, T-box, conserved site |
ENSDARP00000005351 | ProSitePatterns | PS01283 | IPR018186 | 44 | 63 | - | Transcription factor, T-box, conserved site |
ENSDARP00000005351 | ProSiteProfiles | PS50252 | IPR001699 | 39 | 212 | 0.00e-00 | Transcription factor, T-box |
ENSDARP00000005351 | SMART | SM00425 | IPR001699 | 34 | 217 | 3.40e-120 | Transcription factor, T-box |
ENSDARP00000005351 | SUPERFAMILY | SSF49417 | IPR008967 | 34 | 215 | 0.00e-00 | p53-like transcription factor, DNA-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000005351 | PF00907 | 0 | T-box | T-box |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000005351 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSDARP00000005351 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000005351 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
30195 | Bombus terrestris | 100649235 | 10029 | Cricetulus griseus | 100755407 |
10116 | Rattus norvegicus | 292301 | 9796 | Equus caballus | 100056012 |
7425 | Nasonia vitripennis | 100117178 | 6087 | Hydra magnipapillata | 100204831 |
10224 | Saccoglossus kowalevskii | 100303461 | 7029 | Acyrthosiphon pisum | 100573550 |
8128 | Oreochromis niloticus | 100710660 | 132113 | Bombus impatiens | 100747463 |
7463 | Apis florea | 100868850 | 30611 | Otolemur garnettii | 100947150 |
9597 | Pan paniscus | 100974229 | 9555 | Papio anubis | 101018907 |
39432 | Saimiri boliviensis | 101032219 | 9669 | Mustela putorius furo | 101682253 |
43179 | Ictidomys tridecemlineatus | 101968217 | 13735 | Pelodiscus sinensis | 102456935 |
7227 | Drosophila melanogaster | 39349 | 9615 | Canis familiaris | 403653 |
7668 | Strongylocentrotus purpuratus | 576774 | 7070 | Tribolium castaneum | 652935 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000009278 | 10141 | Cavia porcellus | ENSCPOG00000001358 |
9361 | Dasypus novemcinctus | ENSDNOG00000016178 | 9685 | Felis catus | ENSFCAG00000000777 |
8049 | Gadus morhua | ENSGMOG00000018941 | 7897 | Latimeria chalumnae | ENSLACG00000011042 |
9785 | Loxodonta africana | ENSLAFG00000012505 | 9103 | Meleagris gallopavo | ENSMGAG00000012328 |
9258 | Ornithorhynchus anatinus | ENSOANG00000012289 | 9986 | Oryctolagus cuniculus | ENSOCUG00000000660 |
8090 | Oryzias latipes | ENSORLG00000014067 | 9601 | Pongo abelii | ENSPPYG00000017163 |
9305 | Sarcophilus harrisii | ENSSHAG00000018904 | 99883 | Tetraodon nigroviridis | ENSTNIG00000005634 |
31033 | Takifugu rubripes | ENSTRUG00000012130 | 9739 | Tursiops truncatus | ENSTTRG00000016665 |
8364 | Xenopus tropicalis | ENSXETG00000005370 | 8083 | Xiphophorus maculatus | ENSXMAG00000012033 |
7719 | Ciona intestinalis | ENSCING00000000810 | 9483 | Callithrix jacchus | ENSCJAG00000012508 |
51511 | Ciona savignyi | ENSCSAVG00000002247 | 69293 | Gasterosteus aculeatus | ENSGACG00000007637 |
9031 | Gallus gallus | ENSGALG00000011489 | 9595 | Gorilla gorilla | ENSGGOG00000007693 |
30608 | Microcebus murinus | ENSMICG00000016122 | 13616 | Monodelphis domestica | ENSMODG00000006318 |
9978 | Ochotona princeps | ENSOPRG00000003376 |