Basic Information | |||
Gene ID | 562381 | ||
Gene Name | sox12; si:dkey-76p14.4 | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q7SZW4 | UniGene | Dr.87855 |
PDB | NULL | OMIM | NULL |
KEGG | dre:562381 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000065971 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000065971 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 52 | 131 | 2.00e-34 | High mobility group box domain |
ENSDARP00000065971 | Pfam | PF00505 | IPR009071 | 53 | 121 | 1.20e-24 | High mobility group box domain |
ENSDARP00000065971 | PIRSF | PIRSF038098 | IPR017386 | 1 | 355 | 1.30e-189 | Transcription factor SOX-12/11/4a |
ENSDARP00000065971 | ProSiteProfiles | PS50118 | IPR009071 | 53 | 121 | 0.00e-00 | High mobility group box domain |
ENSDARP00000065971 | SMART | SM00398 | IPR009071 | 52 | 122 | 8.20e-31 | High mobility group box domain |
ENSDARP00000065971 | SUPERFAMILY | SSF47095 | IPR009071 | 36 | 125 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000065971 | PF00505 | 6.3e-25 | HMG_box | HMG (high mobility group) box |
ENSDARP00000065971 | PF09011 | 2.2e-08 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000065971 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSDARP00000065971 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000065971 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
143995 | Megachile rotundata | 100875283 | 7897 | Latimeria chalumnae | 102349405 |
9615 | Canis familiaris | 485820 | 400682 | Amphimedon queenslandica | 100631786 |
9555 | Papio anubis | 100999725 | 13735 | Pelodiscus sinensis | 102449995 |
9606 | Homo sapiens | 6666 | 28377 | Anolis carolinensis | ENSACAG00000008177 |
13616 | Monodelphis domestica | ENSMODG00000019507 | 10116 | Rattus norvegicus | 689988 |
9305 | Sarcophilus harrisii | ENSSHAG00000004381 | 9739 | Tursiops truncatus | ENSTTRG00000008502 |
Paralogs | |||
336346 |