Basic Information
Gene ID 562381
Gene Name sox12; si:dkey-76p14.4
Full Name Uncharacterized protein
Organism Danio rerio [7955]

Cross Reference
UniProt Q7SZW4 UniGene Dr.87855
PDB NULL OMIM NULL
KEGG dre:562381 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7955.ENSDARP00000065971

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000065971 Gene3D G3DSA:1.10.30.10 IPR009071 52 131 2.00e-34 High mobility group box domain
ENSDARP00000065971 Pfam PF00505 IPR009071 53 121 1.20e-24 High mobility group box domain
ENSDARP00000065971 PIRSF PIRSF038098 IPR017386 1 355 1.30e-189 Transcription factor SOX-12/11/4a
ENSDARP00000065971 ProSiteProfiles PS50118 IPR009071 53 121 0.00e-00 High mobility group box domain
ENSDARP00000065971 SMART SM00398 IPR009071 52 122 8.20e-31 High mobility group box domain
ENSDARP00000065971 SUPERFAMILY SSF47095 IPR009071 36 125 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000065971 PF00505 6.3e-25 HMG_box HMG (high mobility group) box
ENSDARP00000065971 PF09011 2.2e-08 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000065971 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSDARP00000065971 GO:0005634 cellular_component nucleus
ENSDARP00000065971 GO:0003677 molecular_function DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
143995 Megachile rotundata 100875283 7897 Latimeria chalumnae 102349405
9615 Canis familiaris 485820 400682 Amphimedon queenslandica 100631786
9555 Papio anubis 100999725 13735 Pelodiscus sinensis 102449995
9606 Homo sapiens 6666 28377 Anolis carolinensis ENSACAG00000008177
13616 Monodelphis domestica ENSMODG00000019507 10116 Rattus norvegicus 689988
9305 Sarcophilus harrisii ENSSHAG00000004381 9739 Tursiops truncatus ENSTTRG00000008502

Paralogs
336346