Basic Information
Gene ID 779738
Gene Name taf4
Full Name TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q0IJ02 UniGene Str.16814
PDB NULL OMIM NULL
KEGG xtr:779738 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000012886

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSXETP00000012886 Gene3D G3DSA:1.10.20.10 IPR009072 819 868 9.70e-27 Histone-fold
ENSXETP00000012886 Pfam PF05236 IPR007900 782 1031 1.50e-88 Transcription initiation factor TFIID component TAF4
ENSXETP00000012886 Pfam PF07531 IPR003894 540 633 1.20e-39 TAFH/NHR1
ENSXETP00000012886 ProSiteProfiles PS51119 IPR003894 539 636 0.00e-00 TAFH/NHR1
ENSXETP00000012886 SMART SM00549 IPR003894 541 633 4.60e-56 TAFH/NHR1
ENSXETP00000012886 SUPERFAMILY SSF47113 IPR009072 820 867 0.00e-00 Histone-fold

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSXETP00000012886 PF05236 0 TAF4 Transcription initiation factor TFIID component TAF4 family
ENSXETP00000012886 PF07531 1.2e-39 TAFH NHR1 homology to TAF

Gene Ontology Annotation
Protein Entry Name Space Description
ENSXETP00000012886 GO:0006352 biological_process DNA-templated transcription, initiation
ENSXETP00000012886 GO:0006366 biological_process transcription from RNA polymerase II promoter
ENSXETP00000012886 GO:0006367 biological_process transcription initiation from RNA polymerase II promoter
ENSXETP00000012886 GO:0006368 biological_process transcription elongation from RNA polymerase II promoter
ENSXETP00000012886 GO:0010467 biological_process gene expression
ENSXETP00000012886 GO:0016032 biological_process viral process
ENSXETP00000012886 GO:0005634 cellular_component nucleus
ENSXETP00000012886 GO:0005654 cellular_component nucleoplasm
ENSXETP00000012886 GO:0005669 cellular_component transcription factor TFIID complex
ENSXETP00000012886 GO:0005730 cellular_component nucleolus
ENSXETP00000012886 GO:0005737 cellular_component cytoplasm
ENSXETP00000012886 GO:0003677 molecular_function DNA binding
ENSXETP00000012886 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSXETP00000012886 GO:0046982 molecular_function protein heterodimerization activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7955 Danio rerio 100150678 30195 Bombus terrestris 100644560
132113 Bombus impatiens 100746770 7463 Apis florea 100871646
9555 Papio anubis 101000177 39432 Saimiri boliviensis 101046014
13735 Pelodiscus sinensis 102448897 10090 Mus musculus 228980
9598 Pan troglodytes 458381 7668 Strongylocentrotus purpuratus 576814
7070 Tribolium castaneum 654970 7425 Nasonia vitripennis 100119872
6087 Hydra magnipapillata 100207984 10029 Cricetulus griseus 100769929
143995 Megachile rotundata 100875934 9597 Pan paniscus 100970035
7227 Drosophila melanogaster 39765 9615 Canis familiaris ENSCAFG00000012509
10020 Dipodomys ordii ENSDORG00000006800 9685 Felis catus ENSFCAG00000011994
8049 Gadus morhua ENSGMOG00000002528 9315 Macropus eugenii ENSMEUG00000013666
9669 Mustela putorius furo ENSMPUG00000007569 30611 Otolemur garnettii ENSOGAG00000024820
7757 Petromyzon marinus ENSPMAG00000003074 10116 Rattus norvegicus ENSRNOG00000045974
59729 Taeniopygia guttata ENSTGUG00000007892 99883 Tetraodon nigroviridis ENSTNIG00000007089
28377 Anolis carolinensis ENSACAG00000016214 9913 Bos taurus ENSBTAG00000047991
7719 Ciona intestinalis ENSCING00000009553 9483 Callithrix jacchus ENSCJAG00000014438
51511 Ciona savignyi ENSCSAVG00000007080 9796 Equus caballus ENSECAG00000023048
9365 Erinaceus europaeus ENSEEUG00000008763 69293 Gasterosteus aculeatus ENSGACG00000009979
9031 Gallus gallus ENSGALG00000005121 9595 Gorilla gorilla ENSGGOG00000002111
7897 Latimeria chalumnae ENSLACG00000000501 9785 Loxodonta africana ENSLAFG00000001807
9103 Meleagris gallopavo ENSMGAG00000005271 30608 Microcebus murinus ENSMICG00000004029
59463 Myotis lucifugus ENSMLUG00000010291 9544 Macaca mulatta ENSMMUG00000008696
13616 Monodelphis domestica ENSMODG00000016684 61853 Nomascus leucogenys ENSNLEG00000015722
9258 Ornithorhynchus anatinus ENSOANG00000003371 9986 Oryctolagus cuniculus ENSOCUG00000022377
8128 Oreochromis niloticus ENSONIG00000017122 9978 Ochotona princeps ENSOPRG00000004667
8090 Oryzias latipes ENSORLG00000014154 9813 Procavia capensis ENSPCAG00000004596
9601 Pongo abelii ENSPPYG00000029916 132908 Pteropus vampyrus ENSPVAG00000017917
9305 Sarcophilus harrisii ENSSHAG00000013545 9823 Sus scrofa ENSSSCG00000024694
43179 Ictidomys tridecemlineatus ENSSTOG00000014768 37347 Tupaia belangeri ENSTBEG00000007812
31033 Takifugu rubripes ENSTRUG00000011488 9739 Tursiops truncatus ENSTTRG00000009139
8083 Xiphophorus maculatus ENSXMAG00000015488