Basic Information | |||
Gene ID | 100150678 | ||
Gene Name | taf4b | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1QMF8 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | dre:100150678 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000057038 | Gene3D | G3DSA:1.10.20.10 | IPR009072 | 632 | 681 | 2.10e-20 | Histone-fold |
ENSDARP00000057038 | Pfam | PF05236 | IPR007900 | 595 | 831 | 1.40e-71 | Transcription initiation factor TFIID component TAF4 |
ENSDARP00000057038 | Pfam | PF07531 | IPR003894 | 394 | 486 | 3.50e-38 | TAFH/NHR1 |
ENSDARP00000057038 | ProSiteProfiles | PS51119 | IPR003894 | 393 | 490 | 0.00e-00 | TAFH/NHR1 |
ENSDARP00000057038 | SMART | SM00549 | IPR003894 | 395 | 487 | 3.90e-41 | TAFH/NHR1 |
ENSDARP00000057038 | SUPERFAMILY | SSF47113 | IPR009072 | 633 | 680 | 0.00e-00 | Histone-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000057038 | PF05236 | 0 | TAF4 | Transcription initiation factor TFIID component TAF4 family |
ENSDARP00000057038 | PF07531 | 3.5e-38 | TAFH | NHR1 homology to TAF |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSDARP00000057038 | GO:0006352 | biological_process | DNA-templated transcription, initiation |
ENSDARP00000057038 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
ENSDARP00000057038 | GO:0006367 | biological_process | transcription initiation from RNA polymerase II promoter |
ENSDARP00000057038 | GO:0006368 | biological_process | transcription elongation from RNA polymerase II promoter |
ENSDARP00000057038 | GO:0010467 | biological_process | gene expression |
ENSDARP00000057038 | GO:0016032 | biological_process | viral process |
ENSDARP00000057038 | GO:0005634 | cellular_component | nucleus |
ENSDARP00000057038 | GO:0005654 | cellular_component | nucleoplasm |
ENSDARP00000057038 | GO:0005669 | cellular_component | transcription factor TFIID complex |
ENSDARP00000057038 | GO:0005730 | cellular_component | nucleolus |
ENSDARP00000057038 | GO:0005737 | cellular_component | cytoplasm |
ENSDARP00000057038 | GO:0003677 | molecular_function | DNA binding |
ENSDARP00000057038 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSDARP00000057038 | GO:0046982 | molecular_function | protein heterodimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100119872 | 7029 | Acyrthosiphon pisum | 100159915 |
6087 | Hydra magnipapillata | 100207984 | 10224 | Saccoglossus kowalevskii | 100371641 |
132113 | Bombus impatiens | 100746770 | 10029 | Cricetulus griseus | 100769929 |
143995 | Megachile rotundata | 100875934 | 34638 | Metaseiulus occidentalis | 100900110 |
9597 | Pan paniscus | 100970035 | 9555 | Papio anubis | 101000177 |
39432 | Saimiri boliviensis | 101046014 | 13735 | Pelodiscus sinensis | 102448897 |
7227 | Drosophila melanogaster | 39765 | 9598 | Pan troglodytes | 458381 |
7668 | Strongylocentrotus purpuratus | 576814 | 7070 | Tribolium castaneum | 654970 |
9606 | Homo sapiens | 6875 | 8364 | Xenopus tropicalis | 779738 |
28377 | Anolis carolinensis | ENSACAG00000016214 | 9913 | Bos taurus | ENSBTAG00000047991 |
9615 | Canis familiaris | ENSCAFG00000012509 | 9358 | Choloepus hoffmanni | ENSCHOG00000007830 |
9483 | Callithrix jacchus | ENSCJAG00000014438 | 10141 | Cavia porcellus | ENSCPOG00000001414 |
10020 | Dipodomys ordii | ENSDORG00000006800 | 9365 | Erinaceus europaeus | ENSEEUG00000008763 |
9371 | Echinops telfairi | ENSETEG00000011393 | 9685 | Felis catus | ENSFCAG00000011715 |
69293 | Gasterosteus aculeatus | ENSGACG00000002940 | 8049 | Gadus morhua | ENSGMOG00000017138 |
7897 | Latimeria chalumnae | ENSLACG00000000501 | 9785 | Loxodonta africana | ENSLAFG00000001807 |
9315 | Macropus eugenii | ENSMEUG00000013666 | 9103 | Meleagris gallopavo | ENSMGAG00000005271 |
59463 | Myotis lucifugus | ENSMLUG00000010291 | 9544 | Macaca mulatta | ENSMMUG00000008696 |
13616 | Monodelphis domestica | ENSMODG00000016684 | 9669 | Mustela putorius furo | ENSMPUG00000007569 |
61853 | Nomascus leucogenys | ENSNLEG00000015722 | 30611 | Otolemur garnettii | ENSOGAG00000024820 |
8128 | Oreochromis niloticus | ENSONIG00000017122 | 9978 | Ochotona princeps | ENSOPRG00000010329 |
8090 | Oryzias latipes | ENSORLG00000014154 | 9813 | Procavia capensis | ENSPCAG00000004596 |
7757 | Petromyzon marinus | ENSPMAG00000003074 | 9601 | Pongo abelii | ENSPPYG00000029916 |
132908 | Pteropus vampyrus | ENSPVAG00000017917 | 10116 | Rattus norvegicus | ENSRNOG00000045974 |
42254 | Sorex araneus | ENSSARG00000006618 | 9305 | Sarcophilus harrisii | ENSSHAG00000013545 |
9823 | Sus scrofa | ENSSSCG00000024694 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000014768 |
37347 | Tupaia belangeri | ENSTBEG00000007812 | 59729 | Taeniopygia guttata | ENSTGUG00000007892 |
99883 | Tetraodon nigroviridis | ENSTNIG00000007089 | 9478 | Tarsius syrichta | ENSTSYG00000009936 |
9739 | Tursiops truncatus | ENSTTRG00000009139 | 30538 | Vicugna pacos | ENSVPAG00000011346 |
8083 | Xiphophorus maculatus | ENSXMAG00000015488 | 9986 | Oryctolagus cuniculus | 100349838 |
30195 | Bombus terrestris | 100644560 | 10090 | Mus musculus | 228980 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000014196 | 7719 | Ciona intestinalis | ENSCING00000009553 |
51511 | Ciona savignyi | ENSCSAVG00000007080 | 9796 | Equus caballus | ENSECAG00000023048 |
9031 | Gallus gallus | ENSGALG00000005121 | 9595 | Gorilla gorilla | ENSGGOG00000002111 |
30608 | Microcebus murinus | ENSMICG00000004029 | 9258 | Ornithorhynchus anatinus | ENSOANG00000003371 |
31033 | Takifugu rubripes | ENSTRUG00000011095 |