Basic Information | |||
Gene ID | ENSDARG00000035127 | ||
Gene Name | rxrab | ||
Full Name | Retinoic acid receptor RXR-alpha-B | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | F1RDN3 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSDARP00000004918 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 145 | 376 | 3.10e-104 | Nuclear hormone receptor, ligand-binding |
ENSDARP00000004918 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 49 | 133 | 2.30e-34 | Zinc finger, NHR/GATA-type |
ENSDARP00000004918 | Pfam | PF00104 | IPR000536 | 181 | 359 | 8.60e-42 | Nuclear hormone receptor, ligand-binding, core |
ENSDARP00000004918 | Pfam | PF00105 | IPR001628 | 53 | 121 | 5.50e-32 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | Pfam | PF11825 | IPR021780 | 9 | 44 | 3.00e-10 | Nuclear/hormone receptor activator site AF-1 |
ENSDARP00000004918 | PRINTS | PR00047 | IPR001628 | 103 | 111 | 3.50e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | PRINTS | PR00047 | IPR001628 | 111 | 119 | 3.50e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | PRINTS | PR00047 | IPR001628 | 54 | 70 | 3.50e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | PRINTS | PR00047 | IPR001628 | 70 | 85 | 3.50e-19 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | PRINTS | PR00398 | IPR001723 | 115 | 125 | 5.90e-36 | Steroid hormone receptor |
ENSDARP00000004918 | PRINTS | PR00398 | IPR001723 | 188 | 209 | 5.90e-36 | Steroid hormone receptor |
ENSDARP00000004918 | PRINTS | PR00398 | IPR001723 | 209 | 225 | 5.90e-36 | Steroid hormone receptor |
ENSDARP00000004918 | PRINTS | PR00398 | IPR001723 | 277 | 292 | 5.90e-36 | Steroid hormone receptor |
ENSDARP00000004918 | PRINTS | PR00398 | IPR001723 | 334 | 351 | 5.90e-36 | Steroid hormone receptor |
ENSDARP00000004918 | PRINTS | PR00545 | IPR000003 | 122 | 135 | 8.80e-41 | Retinoid X receptor/HNF4 |
ENSDARP00000004918 | PRINTS | PR00545 | IPR000003 | 239 | 264 | 8.80e-41 | Retinoid X receptor/HNF4 |
ENSDARP00000004918 | PRINTS | PR00545 | IPR000003 | 265 | 283 | 8.80e-41 | Retinoid X receptor/HNF4 |
ENSDARP00000004918 | PRINTS | PR00545 | IPR000003 | 306 | 325 | 8.80e-41 | Retinoid X receptor/HNF4 |
ENSDARP00000004918 | ProSitePatterns | PS00031 | IPR001628 | 54 | 80 | - | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | ProSiteProfiles | PS51030 | IPR001628 | 51 | 126 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | SMART | SM00399 | IPR001628 | 51 | 122 | 5.60e-42 | Zinc finger, nuclear hormone receptor-type |
ENSDARP00000004918 | SMART | SM00430 | IPR000536 | 187 | 346 | 5.30e-56 | Nuclear hormone receptor, ligand-binding, core |
ENSDARP00000004918 | SUPERFAMILY | SSF48508 | IPR008946 | 104 | 373 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSDARP00000004918 | PF00104 | 6.00036e-42 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
ENSDARP00000004918 | PF00105 | 3.2e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
ENSDARP00000004918 | PF11825 | 1.7e-10 | Nuc_recep-AF1 | Nuclear/hormone receptor activator site AF-1 |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9483 | Callithrix jacchus | ENSCJAG00000010148 | 9796 | Equus caballus | 100069096 |
9258 | Ornithorhynchus anatinus | 100074625 | 7029 | Acyrthosiphon pisum | 100164958 |
10224 | Saccoglossus kowalevskii | 100329058 | 34638 | Metaseiulus occidentalis | 100897482 |
9597 | Pan paniscus | 100989625 | 9555 | Papio anubis | 101012079 |
39432 | Saimiri boliviensis | 101044148 | 9669 | Mustela putorius furo | 101685997 |
13735 | Pelodiscus sinensis | 102443949 | 10090 | Mus musculus | 20181 |
7227 | Drosophila melanogaster | 31165 | 9615 | Canis familiaris | 491278 |
7668 | Strongylocentrotus purpuratus | 579018 | 9606 | Homo sapiens | 6256 |
28377 | Anolis carolinensis | ENSACAG00000007923 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000011124 |
9913 | Bos taurus | ENSBTAG00000017851 | 10141 | Cavia porcellus | ENSCPOG00000000168 |
51511 | Ciona savignyi | ENSCSAVG00000007831 | 9361 | Dasypus novemcinctus | ENSDNOG00000015431 |
10020 | Dipodomys ordii | ENSDORG00000009780 | 9685 | Felis catus | ENSFCAG00000002431 |
69293 | Gasterosteus aculeatus | ENSGACG00000018189 | 9031 | Gallus gallus | ENSGALG00000002626 |
9595 | Gorilla gorilla | ENSGGOG00000009752 | 8049 | Gadus morhua | ENSGMOG00000014502 |
9103 | Meleagris gallopavo | ENSMGAG00000006819 | 59463 | Myotis lucifugus | ENSMLUG00000010476 |
13616 | Monodelphis domestica | ENSMODG00000013136 | 61853 | Nomascus leucogenys | ENSNLEG00000008722 |
30611 | Otolemur garnettii | ENSOGAG00000010970 | 8128 | Oreochromis niloticus | ENSONIG00000013076 |
9978 | Ochotona princeps | ENSOPRG00000000905 | 7757 | Petromyzon marinus | ENSPMAG00000007822 |
9601 | Pongo abelii | ENSPPYG00000019748 | 9598 | Pan troglodytes | ENSPTRG00000021527 |
9305 | Sarcophilus harrisii | ENSSHAG00000015645 | 59729 | Taeniopygia guttata | ENSTGUG00000005800 |
9739 | Tursiops truncatus | ENSTTRG00000004291 | 8364 | Xenopus tropicalis | ENSXETG00000012733 |
8083 | Xiphophorus maculatus | ENSXMAG00000001735 | 9365 | Erinaceus europaeus | ENSEEUG00000000887 |
8090 | Oryzias latipes | ENSORLG00000012155 | 132908 | Pteropus vampyrus | ENSPVAG00000007118 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000028427 | 37347 | Tupaia belangeri | ENSTBEG00000015312 |
31033 | Takifugu rubripes | ENSTRUG00000006349 |
Paralogs | |||
30486 | 436617 |