Basic Information
Gene ID ENSDARG00000040266
Gene Name sox19b
Full Name Transcription factor Sox-19b
Organism Danio rerio [7955]

Cross Reference
UniProt F1R211 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000058909 Gene3D G3DSA:1.10.30.10 IPR009071 52 131 1.90e-39 High mobility group box domain
ENSDARP00000058909 Pfam PF00505 IPR009071 53 121 2.10e-26 High mobility group box domain
ENSDARP00000058909 Pfam PF12336 IPR022097 122 203 7.50e-07 Transcription factor SOX
ENSDARP00000058909 ProSiteProfiles PS50118 IPR009071 53 121 0.00e-00 High mobility group box domain
ENSDARP00000058909 SMART SM00398 IPR009071 52 122 1.60e-30 High mobility group box domain
ENSDARP00000058909 SUPERFAMILY SSF47095 IPR009071 48 125 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000058909 PF00505 1.2e-26 HMG_box HMG (high mobility group) box
ENSDARP00000058909 PF09011 1.6e-10 HMG_box_2 HMG-box domain
ENSDARP00000058909 PF12336 7.5e-07 SOXp SOX transcription factor

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000058909 GO:0006351 biological_process transcription, DNA-templated
ENSDARP00000058909 GO:0005634 cellular_component nucleus
ENSDARP00000058909 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100164548 8083 Xiphophorus maculatus 102216676
7070 Tribolium castaneum 663351 51511 Ciona savignyi ENSCSAVG00000000494
69293 Gasterosteus aculeatus ENSGACG00000020077 8128 Oreochromis niloticus ENSONIG00000000602
42254 Sorex araneus ENSSARG00000006102 30538 Vicugna pacos ENSVPAG00000010334
9365 Erinaceus europaeus ENSEEUG00000013305 8049 Gadus morhua ENSGMOG00000018365

Paralogs
30038