Basic Information
Gene ID 30038
Gene Name sox19a; sox19; si:ch211-137i24.8
Full Name Transcription factor Sox-19a
Organism Danio rerio [7955]

Cross Reference
UniProt P47792 UniGene Dr.32892
PDB NULL OMIM NULL
KEGG dre:30038 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSDARP00000100683 Gene3D G3DSA:1.10.30.10 IPR009071 52 130 2.90e-40 High mobility group box domain
ENSDARP00000100683 Pfam PF00505 IPR009071 53 121 5.50e-27 High mobility group box domain
ENSDARP00000100683 Pfam PF12336 IPR022097 122 188 2.30e-05 Transcription factor SOX
ENSDARP00000100683 ProSiteProfiles PS50118 IPR009071 53 121 0.00e-00 High mobility group box domain
ENSDARP00000100683 SMART SM00398 IPR009071 52 122 2.70e-31 High mobility group box domain
ENSDARP00000100683 SUPERFAMILY SSF47095 IPR009071 45 125 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSDARP00000100683 PF00505 5.5e-27 HMG_box HMG (high mobility group) box
ENSDARP00000100683 PF09011 9.2e-11 HMG_box_2 HMG-box domain
ENSDARP00000100683 PF12336 2.3e-05 SOXp SOX transcription factor

Gene Ontology Annotation
Protein Entry Name Space Description
ENSDARP00000100683 GO:0005634 cellular_component nucleus

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9978 Ochotona princeps ENSOPRG00000017106 7719 Ciona intestinalis ENSCING00000006005
7897 Latimeria chalumnae ENSLACG00000004841 59463 Myotis lucifugus ENSMLUG00000013015
7757 Petromyzon marinus ENSPMAG00000009737 31033 Takifugu rubripes ENSTRUG00000005238

Paralogs
ENSDARG00000040266