Basic Information | |||
Gene ID | ENSTNIG00000009051 | ||
Gene Name | RFX3 | ||
Full Name | Uncharacterized protein | ||
Organism | Tetraodon nigroviridis [99883] |
Cross Reference | |||
UniProt | H3CUH5 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTNIP00000011909 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 216 | 291 | 7.20e-42 | Winged helix-turn-helix DNA-binding domain |
ENSTNIP00000011909 | Pfam | PF02257 | IPR003150 | 209 | 292 | 2.30e-38 | DNA-binding RFX-type winged-helix domain |
ENSTNIP00000011909 | Pfam | PF04589 | IPR007668 | 35 | 174 | 6.00e-40 | RFX1 transcription activation region |
ENSTNIP00000011909 | ProSiteProfiles | PS51526 | IPR003150 | 216 | 291 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTNIP00000011909 | PF04589 | 6e-40 | RFX1_trans_act | RFX1 transcription activation region |
ENSTNIP00000011909 | PF02257 | 1.4e-39 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTNIP00000011909 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSTNIP00000011909 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSTNIP00000011909 | GO:0005634 | cellular_component | nucleus |
ENSTNIP00000011909 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10090 | Mus musculus | 19726 | 37347 | Tupaia belangeri | ENSTBEG00000016009 |
9986 | Oryctolagus cuniculus | 100009410 | 9646 | Ailuropoda melanoleuca | 100472256 |
9785 | Loxodonta africana | 100653791 | 8128 | Oreochromis niloticus | 100708111 |
34638 | Metaseiulus occidentalis | 100908403 | 9597 | Pan paniscus | 100974143 |
9555 | Papio anubis | 101014246 | 39432 | Saimiri boliviensis | 101052699 |
9685 | Felis catus | 101089969 | 9669 | Mustela putorius furo | 101676154 |
8083 | Xiphophorus maculatus | 102228455 | 7227 | Drosophila melanogaster | 41266 |
7668 | Strongylocentrotus purpuratus | 586051 | 9606 | Homo sapiens | 5991 |
9913 | Bos taurus | ENSBTAG00000000819 | 9615 | Canis familiaris | ENSCAFG00000002053 |
9358 | Choloepus hoffmanni | ENSCHOG00000008113 | 10141 | Cavia porcellus | ENSCPOG00000000900 |
7955 | Danio rerio | ENSDARG00000014550 | 9361 | Dasypus novemcinctus | ENSDNOG00000018668 |
10020 | Dipodomys ordii | ENSDORG00000013906 | 9796 | Equus caballus | ENSECAG00000011075 |
9365 | Erinaceus europaeus | ENSEEUG00000013595 | 69293 | Gasterosteus aculeatus | ENSGACG00000016864 |
9595 | Gorilla gorilla | ENSGGOG00000003805 | 8049 | Gadus morhua | ENSGMOG00000013997 |
7897 | Latimeria chalumnae | ENSLACG00000011846 | 9103 | Meleagris gallopavo | ENSMGAG00000005240 |
59463 | Myotis lucifugus | ENSMLUG00000013765 | 9544 | Macaca mulatta | ENSMMUG00000000802 |
13616 | Monodelphis domestica | ENSMODG00000015410 | 9258 | Ornithorhynchus anatinus | ENSOANG00000014996 |
30611 | Otolemur garnettii | ENSOGAG00000007762 | 9978 | Ochotona princeps | ENSOPRG00000000862 |
8090 | Oryzias latipes | ENSORLG00000007747 | 9813 | Procavia capensis | ENSPCAG00000015591 |
7757 | Petromyzon marinus | ENSPMAG00000002263 | 9601 | Pongo abelii | ENSPPYG00000019253 |
13735 | Pelodiscus sinensis | ENSPSIG00000005608 | 132908 | Pteropus vampyrus | ENSPVAG00000001088 |
42254 | Sorex araneus | ENSSARG00000013845 | 9305 | Sarcophilus harrisii | ENSSHAG00000003775 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000006974 | 31033 | Takifugu rubripes | ENSTRUG00000013889 |
9478 | Tarsius syrichta | ENSTSYG00000006974 | 9739 | Tursiops truncatus | ENSTTRG00000003709 |
30538 | Vicugna pacos | ENSVPAG00000005472 | 8364 | Xenopus tropicalis | ENSXETG00000011698 |