Basic Information | |||
Gene ID | ENSXETG00000011698 | ||
Gene Name | rfx3 | ||
Full Name | Transcription factor RFX3 | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | F6WLY3 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000012258 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 183 | 258 | 6.90e-42 | Winged helix-turn-helix DNA-binding domain |
ENSXETP00000012258 | Pfam | PF02257 | IPR003150 | 176 | 259 | 2.00e-38 | DNA-binding RFX-type winged-helix domain |
ENSXETP00000012258 | Pfam | PF04589 | IPR007668 | 1 | 139 | 1.40e-53 | RFX1 transcription activation region |
ENSXETP00000012258 | ProSiteProfiles | PS51526 | IPR003150 | 183 | 258 | 0.00e-00 | DNA-binding RFX-type winged-helix domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000012258 | PF04589 | 0 | RFX1_trans_act | RFX1 transcription activation region |
ENSXETP00000012258 | PF02257 | 5e-39 | RFX_DNA_binding | RFX DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000012258 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSXETP00000012258 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSXETP00000012258 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000012258 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100009410 | 7425 | Nasonia vitripennis | 100121130 |
10224 | Saccoglossus kowalevskii | 100372282 | 9646 | Ailuropoda melanoleuca | 100472256 |
30195 | Bombus terrestris | 100642228 | 9785 | Loxodonta africana | 100653791 |
8128 | Oreochromis niloticus | 100708111 | 143995 | Megachile rotundata | 100876007 |
9597 | Pan paniscus | 100974143 | 9555 | Papio anubis | 101014246 |
9685 | Felis catus | 101089969 | 10090 | Mus musculus | 19726 |
9913 | Bos taurus | ENSBTAG00000000819 | 7719 | Ciona intestinalis | ENSCING00000009186 |
9483 | Callithrix jacchus | ENSCJAG00000016750 | 7955 | Danio rerio | ENSDARG00000014550 |
9361 | Dasypus novemcinctus | ENSDNOG00000018668 | 10020 | Dipodomys ordii | ENSDORG00000013906 |
9796 | Equus caballus | ENSECAG00000011075 | 9365 | Erinaceus europaeus | ENSEEUG00000013595 |
7897 | Latimeria chalumnae | ENSLACG00000011846 | 9315 | Macropus eugenii | ENSMEUG00000011061 |
9544 | Macaca mulatta | ENSMMUG00000000802 | 61853 | Nomascus leucogenys | ENSNLEG00000015842 |
9258 | Ornithorhynchus anatinus | ENSOANG00000014996 | 9813 | Procavia capensis | ENSPCAG00000015591 |
7757 | Petromyzon marinus | ENSPMAG00000002263 | 9598 | Pan troglodytes | ENSPTRG00000010352 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000006974 | 37347 | Tupaia belangeri | ENSTBEG00000016009 |
99883 | Tetraodon nigroviridis | ENSTNIG00000009051 | 9478 | Tarsius syrichta | ENSTSYG00000006974 |
9739 | Tursiops truncatus | ENSTTRG00000003709 | 30538 | Vicugna pacos | ENSVPAG00000005472 |
132113 | Bombus impatiens | 100749382 | 7463 | Apis florea | 100864431 |
39432 | Saimiri boliviensis | 101052699 | 9669 | Mustela putorius furo | 101676154 |
8083 | Xiphophorus maculatus | 102228455 | 7668 | Strongylocentrotus purpuratus | 586051 |
9606 | Homo sapiens | 5991 | 7070 | Tribolium castaneum | 664071 |
9615 | Canis familiaris | ENSCAFG00000002053 | 9358 | Choloepus hoffmanni | ENSCHOG00000008113 |
10141 | Cavia porcellus | ENSCPOG00000000900 | 69293 | Gasterosteus aculeatus | ENSGACG00000016864 |
9595 | Gorilla gorilla | ENSGGOG00000003805 | 8049 | Gadus morhua | ENSGMOG00000010985 |
9103 | Meleagris gallopavo | ENSMGAG00000005240 | 30608 | Microcebus murinus | ENSMICG00000004022 |
59463 | Myotis lucifugus | ENSMLUG00000013765 | 13616 | Monodelphis domestica | ENSMODG00000015410 |
30611 | Otolemur garnettii | ENSOGAG00000007762 | 9978 | Ochotona princeps | ENSOPRG00000000862 |
8090 | Oryzias latipes | ENSORLG00000007747 | 9601 | Pongo abelii | ENSPPYG00000019253 |
13735 | Pelodiscus sinensis | ENSPSIG00000005608 | 132908 | Pteropus vampyrus | ENSPVAG00000001088 |
42254 | Sorex araneus | ENSSARG00000013845 | 9305 | Sarcophilus harrisii | ENSSHAG00000003775 |
59729 | Taeniopygia guttata | ENSTGUG00000000369 | 31033 | Takifugu rubripes | ENSTRUG00000013889 |