Basic Information | |||
Gene ID | ENSTNIG00000011338 | ||
Gene Name | SOX18 | ||
Full Name | Uncharacterized protein | ||
Organism | Tetraodon nigroviridis [99883] |
Cross Reference | |||
UniProt | H3D195 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTNIP00000014281 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 90 | 166 | 6.90e-32 | High mobility group box domain |
ENSTNIP00000014281 | Pfam | PF00505 | IPR009071 | 91 | 159 | 6.30e-23 | High mobility group box domain |
ENSTNIP00000014281 | Pfam | PF12067 | IPR021934 | 224 | 361 | 2.30e-16 | Sox C-terminal transactivation domain |
ENSTNIP00000014281 | Pfam | PF12067 | IPR021934 | 376 | 467 | 9.90e-13 | Sox C-terminal transactivation domain |
ENSTNIP00000014281 | ProSiteProfiles | PS50118 | IPR009071 | 91 | 159 | 0.00e-00 | High mobility group box domain |
ENSTNIP00000014281 | ProSiteProfiles | PS51516 | IPR021934 | 317 | 468 | 0.00e-00 | Sox C-terminal transactivation domain |
ENSTNIP00000014281 | SMART | SM00398 | IPR009071 | 90 | 160 | 1.60e-29 | High mobility group box domain |
ENSTNIP00000014281 | SUPERFAMILY | SSF47095 | IPR009071 | 82 | 163 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTNIP00000014281 | PF12067 | 6.8e-31 | Sox_C_TAD | Sox C-terminal transactivation domain |
ENSTNIP00000014281 | PF00505 | 2.8e-23 | HMG_box | HMG (high mobility group) box |
ENSTNIP00000014281 | PF09011 | 1.8e-09 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTNIP00000014281 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSTNIP00000014281 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSTNIP00000014281 | GO:0007275 | biological_process | multicellular organismal development |
ENSTNIP00000014281 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSTNIP00000014281 | GO:0005634 | cellular_component | nucleus |
ENSTNIP00000014281 | GO:0003677 | molecular_function | DNA binding |
ENSTNIP00000014281 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8049 | Gadus morhua | ENSGMOG00000003535 | 8090 | Oryzias latipes | ENSORLG00000016736 |
59729 | Taeniopygia guttata | 100224917 | 7897 | Latimeria chalumnae | 102347767 |
69293 | Gasterosteus aculeatus | ENSGACG00000010505 | 8128 | Oreochromis niloticus | ENSONIG00000000364 |
13735 | Pelodiscus sinensis | ENSPSIG00000009637 | 31033 | Takifugu rubripes | ENSTRUG00000000777 |
8083 | Xiphophorus maculatus | ENSXMAG00000009334 |