Basic Information
Gene ID ENSTNIG00000011338
Gene Name SOX18
Full Name Uncharacterized protein
Organism Tetraodon nigroviridis [99883]

Cross Reference
UniProt H3D195 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSTNIP00000014281 Gene3D G3DSA:1.10.30.10 IPR009071 90 166 6.90e-32 High mobility group box domain
ENSTNIP00000014281 Pfam PF00505 IPR009071 91 159 6.30e-23 High mobility group box domain
ENSTNIP00000014281 Pfam PF12067 IPR021934 224 361 2.30e-16 Sox C-terminal transactivation domain
ENSTNIP00000014281 Pfam PF12067 IPR021934 376 467 9.90e-13 Sox C-terminal transactivation domain
ENSTNIP00000014281 ProSiteProfiles PS50118 IPR009071 91 159 0.00e-00 High mobility group box domain
ENSTNIP00000014281 ProSiteProfiles PS51516 IPR021934 317 468 0.00e-00 Sox C-terminal transactivation domain
ENSTNIP00000014281 SMART SM00398 IPR009071 90 160 1.60e-29 High mobility group box domain
ENSTNIP00000014281 SUPERFAMILY SSF47095 IPR009071 82 163 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSTNIP00000014281 PF12067 6.8e-31 Sox_C_TAD Sox C-terminal transactivation domain
ENSTNIP00000014281 PF00505 2.8e-23 HMG_box HMG (high mobility group) box
ENSTNIP00000014281 PF09011 1.8e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSTNIP00000014281 GO:0006351 biological_process transcription, DNA-templated
ENSTNIP00000014281 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSTNIP00000014281 GO:0007275 biological_process multicellular organismal development
ENSTNIP00000014281 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSTNIP00000014281 GO:0005634 cellular_component nucleus
ENSTNIP00000014281 GO:0003677 molecular_function DNA binding
ENSTNIP00000014281 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
8049 Gadus morhua ENSGMOG00000003535 8090 Oryzias latipes ENSORLG00000016736
59729 Taeniopygia guttata 100224917 7897 Latimeria chalumnae 102347767
69293 Gasterosteus aculeatus ENSGACG00000010505 8128 Oreochromis niloticus ENSONIG00000000364
13735 Pelodiscus sinensis ENSPSIG00000009637 31033 Takifugu rubripes ENSTRUG00000000777
8083 Xiphophorus maculatus ENSXMAG00000009334