Basic Information | |||
Gene ID | 100224917 | ||
Gene Name | SOX18 | ||
Full Name | Uncharacterized protein | ||
Organism | Taeniopygia guttata [59729] |
Cross Reference | |||
UniProt | H0ZA76 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | tgu:100224917 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSTGUP00000007479 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 99 | 175 | 1.60e-32 | High mobility group box domain |
ENSTGUP00000007479 | Pfam | PF00505 | IPR009071 | 100 | 168 | 2.70e-23 | High mobility group box domain |
ENSTGUP00000007479 | Pfam | PF12067 | IPR021934 | 216 | 415 | 1.00e-77 | Sox C-terminal transactivation domain |
ENSTGUP00000007479 | ProSiteProfiles | PS50118 | IPR009071 | 100 | 168 | 0.00e-00 | High mobility group box domain |
ENSTGUP00000007479 | ProSiteProfiles | PS51516 | IPR021934 | 297 | 416 | 0.00e-00 | Sox C-terminal transactivation domain |
ENSTGUP00000007479 | SMART | SM00398 | IPR009071 | 99 | 169 | 3.60e-28 | High mobility group box domain |
ENSTGUP00000007479 | SUPERFAMILY | SSF47095 | IPR009071 | 85 | 172 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSTGUP00000007479 | PF12067 | 0 | Sox_C_TAD | Sox C-terminal transactivation domain |
ENSTGUP00000007479 | PF00505 | 7.8e-24 | HMG_box | HMG (high mobility group) box |
ENSTGUP00000007479 | PF09011 | 3.8e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSTGUP00000007479 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSTGUP00000007479 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSTGUP00000007479 | GO:0007275 | biological_process | multicellular organismal development |
ENSTGUP00000007479 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSTGUP00000007479 | GO:0005634 | cellular_component | nucleus |
ENSTGUP00000007479 | GO:0003677 | molecular_function | DNA binding |
ENSTGUP00000007479 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10141 | Cavia porcellus | 100727175 | 10029 | Cricetulus griseus | 100767412 |
7897 | Latimeria chalumnae | 102347767 | 10090 | Mus musculus | 20672 |
10116 | Rattus norvegicus | 311723 | 7227 | Drosophila melanogaster | 36575 |
9615 | Canis familiaris | 485984 | 9544 | Macaca mulatta | 694156 |
9483 | Callithrix jacchus | ENSCJAG00000022379 | 51511 | Ciona savignyi | ENSCSAVG00000000494 |
69293 | Gasterosteus aculeatus | ENSGACG00000010505 | 9315 | Macropus eugenii | ENSMEUG00000016410 |
13616 | Monodelphis domestica | ENSMODG00000017052 | 61853 | Nomascus leucogenys | ENSNLEG00000010228 |
13735 | Pelodiscus sinensis | ENSPSIG00000009637 | 9598 | Pan troglodytes | ENSPTRG00000030459 |
9305 | Sarcophilus harrisii | ENSSHAG00000016686 | 31033 | Takifugu rubripes | ENSTRUG00000000777 |
8083 | Xiphophorus maculatus | ENSXMAG00000009334 | 28377 | Anolis carolinensis | 100556585 |
400682 | Amphimedon queenslandica | 100632156 | 9555 | Papio anubis | 101002038 |
43179 | Ictidomys tridecemlineatus | 101973435 | 9913 | Bos taurus | ENSBTAG00000011662 |
8049 | Gadus morhua | ENSGMOG00000003535 | 9103 | Meleagris gallopavo | ENSMGAG00000006624 |
8090 | Oryzias latipes | ENSORLG00000016736 | 9813 | Procavia capensis | ENSPCAG00000015663 |
99883 | Tetraodon nigroviridis | ENSTNIG00000011338 | 8364 | Xenopus tropicalis | ENSXETG00000032706 |