Basic Information
Gene ID ENSXETG00000026438
Gene Name sox17b.1
Full Name Transcription factor Sox-17-beta.1
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt F7E406 UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSXETP00000001541 Gene3D G3DSA:1.10.30.10 IPR009071 57 133 5.40e-33 High mobility group box domain
ENSXETP00000001541 Pfam PF00505 IPR009071 58 126 7.80e-24 High mobility group box domain
ENSXETP00000001541 Pfam PF12067 IPR021934 182 375 1.80e-52 Sox C-terminal transactivation domain
ENSXETP00000001541 ProSiteProfiles PS50118 IPR009071 58 126 0.00e-00 High mobility group box domain
ENSXETP00000001541 ProSiteProfiles PS51516 IPR021934 259 376 0.00e-00 Sox C-terminal transactivation domain
ENSXETP00000001541 SMART SM00398 IPR009071 57 127 1.00e-28 High mobility group box domain
ENSXETP00000001541 SUPERFAMILY SSF47095 IPR009071 50 130 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSXETP00000001541 PF12067 0 Sox_C_TAD Sox C-terminal transactivation domain
ENSXETP00000001541 PF00505 3.7e-24 HMG_box HMG (high mobility group) box
ENSXETP00000001541 PF09011 8.9e-10 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSXETP00000001541 GO:0006351 biological_process transcription, DNA-templated
ENSXETP00000001541 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSXETP00000001541 GO:0007275 biological_process multicellular organismal development
ENSXETP00000001541 GO:0007369 biological_process gastrulation
ENSXETP00000001541 GO:0016055 biological_process Wnt signaling pathway
ENSXETP00000001541 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSXETP00000001541 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSXETP00000001541 GO:0005634 cellular_component nucleus
ENSXETP00000001541 GO:0003677 molecular_function DNA binding
ENSXETP00000001541 GO:0008013 molecular_function beta-catenin binding
ENSXETP00000001541 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100120206 7227 Drosophila melanogaster 36575
7668 Strongylocentrotus purpuratus 587141 7757 Petromyzon marinus ENSPMAG00000009255

Paralogs
100038235