Basic Information | |||
Gene ID | ENSXETG00000026438 | ||
Gene Name | sox17b.1 | ||
Full Name | Transcription factor Sox-17-beta.1 | ||
Organism | Xenopus tropicalis [8364] |
Cross Reference | |||
UniProt | F7E406 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSXETP00000001541 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 57 | 133 | 5.40e-33 | High mobility group box domain |
ENSXETP00000001541 | Pfam | PF00505 | IPR009071 | 58 | 126 | 7.80e-24 | High mobility group box domain |
ENSXETP00000001541 | Pfam | PF12067 | IPR021934 | 182 | 375 | 1.80e-52 | Sox C-terminal transactivation domain |
ENSXETP00000001541 | ProSiteProfiles | PS50118 | IPR009071 | 58 | 126 | 0.00e-00 | High mobility group box domain |
ENSXETP00000001541 | ProSiteProfiles | PS51516 | IPR021934 | 259 | 376 | 0.00e-00 | Sox C-terminal transactivation domain |
ENSXETP00000001541 | SMART | SM00398 | IPR009071 | 57 | 127 | 1.00e-28 | High mobility group box domain |
ENSXETP00000001541 | SUPERFAMILY | SSF47095 | IPR009071 | 50 | 130 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSXETP00000001541 | PF12067 | 0 | Sox_C_TAD | Sox C-terminal transactivation domain |
ENSXETP00000001541 | PF00505 | 3.7e-24 | HMG_box | HMG (high mobility group) box |
ENSXETP00000001541 | PF09011 | 8.9e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSXETP00000001541 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSXETP00000001541 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSXETP00000001541 | GO:0007275 | biological_process | multicellular organismal development |
ENSXETP00000001541 | GO:0007369 | biological_process | gastrulation |
ENSXETP00000001541 | GO:0016055 | biological_process | Wnt signaling pathway |
ENSXETP00000001541 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ENSXETP00000001541 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSXETP00000001541 | GO:0005634 | cellular_component | nucleus |
ENSXETP00000001541 | GO:0003677 | molecular_function | DNA binding |
ENSXETP00000001541 | GO:0008013 | molecular_function | beta-catenin binding |
ENSXETP00000001541 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100120206 | 7227 | Drosophila melanogaster | 36575 |
7668 | Strongylocentrotus purpuratus | 587141 | 7757 | Petromyzon marinus | ENSPMAG00000009255 |
Paralogs | |||
100038235 |