Basic Information
Gene ID 100038235
Gene Name sox17b.2
Full Name Transcription factor Sox-17-beta.2
Organism Xenopus tropicalis [8364]

Cross Reference
UniProt Q6GLH8 UniGene Str.54204
PDB NULL OMIM NULL
KEGG xtr:100038235 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 8364.ENSXETP00000017754

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSXETP00000017754 Gene3D G3DSA:1.10.30.10 IPR009071 57 138 7.70e-33 High mobility group box domain
ENSXETP00000017754 Pfam PF00505 IPR009071 58 126 1.10e-23 High mobility group box domain
ENSXETP00000017754 Pfam PF12067 IPR021934 179 372 2.00e-54 Sox C-terminal transactivation domain
ENSXETP00000017754 ProSiteProfiles PS50118 IPR009071 58 126 0.00e-00 High mobility group box domain
ENSXETP00000017754 ProSiteProfiles PS51516 IPR021934 256 373 0.00e-00 Sox C-terminal transactivation domain
ENSXETP00000017754 SMART SM00398 IPR009071 57 127 1.80e-28 High mobility group box domain
ENSXETP00000017754 SUPERFAMILY SSF47095 IPR009071 57 136 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSXETP00000017754 PF12067 0 Sox_C_TAD Sox C-terminal transactivation domain
ENSXETP00000017754 PF00505 5.4e-24 HMG_box HMG (high mobility group) box
ENSXETP00000017754 PF09011 2.1e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSXETP00000017754 GO:0006351 biological_process transcription, DNA-templated
ENSXETP00000017754 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSXETP00000017754 GO:0007275 biological_process multicellular organismal development
ENSXETP00000017754 GO:0007369 biological_process gastrulation
ENSXETP00000017754 GO:0016055 biological_process Wnt signaling pathway
ENSXETP00000017754 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSXETP00000017754 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSXETP00000017754 GO:0005634 cellular_component nucleus
ENSXETP00000017754 GO:0003677 molecular_function DNA binding
ENSXETP00000017754 GO:0008013 molecular_function beta-catenin binding
ENSXETP00000017754 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100030119 7897 Latimeria chalumnae 102363300
7955 Danio rerio 30544 28377 Anolis carolinensis ENSACAG00000017977
9646 Ailuropoda melanoleuca ENSAMEG00000011673 7719 Ciona intestinalis ENSCING00000007173
10141 Cavia porcellus ENSCPOG00000000892 9595 Gorilla gorilla ENSGGOG00000023175
8049 Gadus morhua ENSGMOG00000005913 9785 Loxodonta africana ENSLAFG00000028829
9315 Macropus eugenii ENSMEUG00000011391 9986 Oryctolagus cuniculus ENSOCUG00000012651
9978 Ochotona princeps ENSOPRG00000007021 59729 Taeniopygia guttata ENSTGUG00000011034
9796 Equus caballus ENSECAG00000009206

Paralogs
ENSXETG00000026438