PredictBias

identification of genomic and pathogenicity islands in prokaryotic genome
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A) Input parameters
Genome2336.gbkThreshold dinucleotide bias2
Threshold codon bias4Threshold %GC bias3
E-value (RPSBlast)0.05Genome (non-pathogenic)
 
B) Compare a potential GI or PAI in related non-pathogenic sp. (phylogenetic tree)
Potential GI or PAI start    end  
Select Organism     
 
C) Potential GIs and PAIs in NC_009487 (download)
S.NoStartEndBiasVirulenceInsertion elementsPrediction
1SaurJH9_0012SaurJH9_0085Y        Y        YPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_00122141.985012alpha/beta hydrolase
SaurJH9_00134162.090277hypothetical protein
SaurJH9_00145152.192404hypothetical protein
SaurJH9_00157172.275007hypothetical protein
SaurJH9_00167172.19424950S ribosomal protein L9
SaurJH9_00177181.692184replicative DNA helicase
SaurJH9_00184172.406384adenylosuccinate synthetase
SaurJH9_00192182.582232**two component transcriptional regulator
SaurJH9_0020-1141.504105multi-sensor signal transduction histidine
SaurJH9_0021-3141.410498hypothetical protein
SaurJH9_0022-4131.518351hypothetical protein
SaurJH9_0023-2140.972233beta-lactamase domain-containing protein
SaurJH9_0024215-2.032714cell wall anchor domain-containing protein
SaurJH9_0025012-3.340305hypothetical protein
SaurJH9_0026-212-3.238778rRNA large subunit methyltransferase
SaurJH9_0027-211-3.849495hypothetical protein
SaurJH9_0028-19-3.858395integrase catalytic subunit
SaurJH9_0029-111-4.010248glycerophosphodiester phosphodiesterase
SaurJH9_0030-114-3.982606dehydratase
SaurJH9_0031318-2.776227peptidoglycan glycosyltransferase
SaurJH9_0032219-2.085403Beta-lactamase
SaurJH9_0035422-0.563217CopY family transcriptional regulator
SaurJH9_0036725-0.673598ROK family protein
SaurJH9_00378260.074895rhodanese domain-containing protein
SaurJH9_00381025-0.135491hypothetical protein
SaurJH9_00391024-0.221021hypothetical protein
SaurJH9_00408240.205432methyltransferase type 12
SaurJH9_0041723-0.364848rRNA (adenine-N(6)-)-methyltransferase
SaurJH9_00427230.0377033''-adenylyltransferase
SaurJH9_00431230.463268hypothetical protein
SaurJH9_00443261.157023phage integrase family protein
SaurJH9_0045-1211.182641phage integrase family protein
SaurJH9_00460201.045009DNA repair protein RadC
SaurJH9_0047019-0.375396hypothetical protein
SaurJH9_0048-118-0.542741hypothetical protein
SaurJH9_0049016-1.323734hypothetical protein
SaurJH9_0050417-2.236627resolvase
SaurJH9_0051318-2.544274resolvase
SaurJH9_0052219-1.662459hypothetical protein
SaurJH9_0053-1201.996255hypothetical protein
SaurJH9_0054-3212.528816hypothetical protein
SaurJH9_0055-4223.661825integrase catalytic subunit
SaurJH9_0056-3233.865642hypothetical protein
SaurJH9_0057-3233.361503hypothetical protein
SaurJH9_0058-3223.086201C4-dicarboxylate anaerobic carrier
SaurJH9_0059-3202.340054two component transcriptional regulator
SaurJH9_0060-1180.767692osmosensitive K+ channel signal transduction
SaurJH9_0061320-2.660746potassium-transporting ATPase subunit A
SaurJH9_0063723-5.339573potassium-transporting ATPase subunit A
SaurJH9_0064720-4.741209potassium-transporting ATPase subunit B
SaurJH9_0065719-4.745208potassium-transporting ATPase subunit C
SaurJH9_0066618-4.294409hypothetical protein
SaurJH9_0067616-3.779828hypothetical protein
SaurJH9_0068515-3.129617hypothetical protein
SaurJH9_0071514-1.295334hypothetical protein
SaurJH9_00721110.146891protein kinase
SaurJH9_00730100.103514hypothetical protein
SaurJH9_00740100.210982hypothetical protein
SaurJH9_00752130.083795hypothetical protein
SaurJH9_00760160.453570hypothetical protein
SaurJH9_0077015-0.225418rhodanese domain-containing protein
SaurJH9_0078317-2.351325beta-lactamase domain-containing protein
SaurJH9_0079418-2.517296FAD-dependent pyridine nucleotide-disulfide
SaurJH9_0082518-2.852120hypothetical protein
SaurJH9_0083718-2.949141hypothetical protein
SaurJH9_0084417-2.341578TfoX domain-containing protein
SaurJH9_0085213-1.125679hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0018HTHFIS942e-24 FIS bacterial regulatory protein HTH signature.
		>HTHFIS#FIS bacterial regulatory protein HTH signature.

Length = 484

Score = 93.7 bits (233), Expect = 2e-24
Identities = 31/124 (25%), Positives = 64/124 (51%), Gaps = 1/124 (0%)

Query: 4 KVVVVDDEKPIADILEFNLKKEGYDVYCAYDGNDAVDLIYEEEPDIVLLDIMLPGRDGME 63
++V DD+ I +L L + GYDV + I + D+V+ D+++P + +
Sbjct: 5 TILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDGDLVVTDVVMPDENAFD 64

Query: 64 VCREVRKKYE-MPIIMLTAKDSEIDKVLGLELGADDYVTKPFSTRELIARVKANLRRHYS 122
+ ++K +P+++++A+++ + + E GA DY+ KPF ELI + L
Sbjct: 65 LLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIGIIGRALAEPKR 124

Query: 123 QPAQ 126
+P++
Sbjct: 125 RPSK 128


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0035PF01206666e-16 SirA family protein
		>PF01206#SirA family protein

Length = 76

Score = 65.6 bits (160), Expect = 6e-16
Identities = 24/70 (34%), Positives = 39/70 (55%)

Query: 118 KQFDFRGLQCPGPIVNISKEINNISTGEQIEVTVTDPGFNSDIKSWAKQTGNTLVNLTEE 177
+ D GL CP PI+ K + ++ GE + V TDPG D +S++KQTG+ L+ EE
Sbjct: 6 QSLDATGLNCPLPILKAKKTLATMNAGEVLYVMATDPGSVKDFESFSKQTGHELLEQKEE 65

Query: 178 ANVINAIIQK 187
+ +++
Sbjct: 66 DGTYHFRLKR 75


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0057HTHFIS1018e-27 FIS bacterial regulatory protein HTH signature.
		>HTHFIS#FIS bacterial regulatory protein HTH signature.

Length = 484

Score = 101 bits (252), Expect = 8e-27
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 1/124 (0%)

Query: 2 KTTLLVVEDDEAILHLIDVALTMNYYKVVTAKTGKEADFRLRTEQPDIILLDLGLPDIDG 61
T+LV +DD AI +++ AL+ Y V + D+++ D+ +PD +
Sbjct: 3 GATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDGDLVVTDVVMPDENA 62

Query: 62 LSLIQQFRD-FVDTPIIVISARTEEQTIVEVLDRGANDYMTKPFNIDELRARIRVALRMS 120
L+ + + D P++V+SA+ T ++ ++GA DY+ KPF++ EL I AL
Sbjct: 63 FDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIGIIGRALAEP 122

Query: 121 RSTE 124
+
Sbjct: 123 KRRP 126


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0058PF06580310.020 Sensor histidine kinase
		>PF06580#Sensor histidine kinase

Length = 349

Score = 31.0 bits (70), Expect = 0.020
Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 765 KLILQVLFNLIDNALKHAESHSE----IKLHVQHETNKIKFEMIDCGKGIPEEERQ 816
+++Q L ++N +KH + I L + + E+ + G + ++
Sbjct: 257 PMLVQTL---VENGIKHGIAQLPQGGKILLKGTKDNGTVTLEVENTGSLALKNTKE 309


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0073PF01206614e-14 SirA family protein
		>PF01206#SirA family protein

Length = 76

Score = 60.5 bits (147), Expect = 4e-14
Identities = 20/70 (28%), Positives = 37/70 (52%)

Query: 118 KQFNYRGFQCPGPIVKISQEMKNIEVGDQIEVKVTDPGFPSDIKSWVKQTRHTLVKLDEN 177
+ + G CP PI+K + + + G+ + V TDPG D +S+ KQT H L++ E
Sbjct: 6 QSLDATGLNCPLPILKAKKTLATMNAGEVLYVMATDPGSVKDFESFSKQTGHELLEQKEE 65

Query: 178 NNGINAIIQK 187
+ + +++
Sbjct: 66 DGTYHFRLKR 75


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0078LCRVANTIGEN250.037 Low calcium response V antigen signature.
		>LCRVANTIGEN#Low calcium response V antigen signature.

Length = 326

Score = 25.4 bits (55), Expect = 0.037
Identities = 12/38 (31%), Positives = 24/38 (63%)

Query: 9 DLFLNHVNSNAVKTRKMMGEYIIYYDSVVIGGLYDNRL 46
++F N V ++ ++ K + Y + D+++ GG YDN+L
Sbjct: 57 EVFANRVITDDIELLKKILAYFLPEDAILKGGHYDNQL 94


2SaurJH9_0094SaurJH9_0119Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0094211-0.905534lipoprotein
SaurJH9_0095112-0.059678hypothetical protein
SaurJH9_00961161.567696lipoprotein
SaurJH9_00971161.528789hypothetical protein
SaurJH9_00980181.945344hypothetical protein
SaurJH9_0099-2101.515966amidohydrolase
SaurJH9_0100-292.582382major facilitator transporter
SaurJH9_0101-1113.033811Na/Pi-cotransporter II-like protein
SaurJH9_01020112.727509myosin-cross-reactive antigen
SaurJH9_01031153.117400hypothetical protein
SaurJH9_01042163.416296GntR family transcriptional regulator
SaurJH9_01052163.297255hypothetical protein
SaurJH9_01061173.517889hypothetical protein
SaurJH9_01070152.662290L-lactate transport
SaurJH9_01080143.259486cell wall anchor domain-containing protein
SaurJH9_0109-1142.648824hypothetical protein
SaurJH9_0110-2131.913309SarA family transcriptional regulator
SaurJH9_0111-2111.275584transport system permease
SaurJH9_0112-111-0.018607transport system permease protein
SaurJH9_0113110-0.330502hypothetical protein
SaurJH9_0114112-1.115577periplasmic binding protein
SaurJH9_0115311-0.663437hypothetical protein
SaurJH9_0116212-0.517724pyridoxal-5'-phosphate-dependent protein subunit
SaurJH9_0117311-0.059997ornithine cyclodeaminase
SaurJH9_01183110.204240IucA/IucC family protein
SaurJH9_01192151.803447major facilitator transporter
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0102FERRIBNDNGPP707e-16 Ferrichrome-binding periplasmic protein signature.
		>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature.

Length = 296

Score = 70.4 bits (172), Expect = 7e-16
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 38/191 (19%)

Query: 53 PKRVVTLYQGATDVAVSLGVKPVGAVES-----WTQKPKFEYIKNDLKDTKI-VGQEPAP 106
P R+V L ++ ++LG+ P G ++ W +P L D+ I VG P
Sbjct: 35 PNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPP-------LPDSVIDVGLRTEP 87

Query: 107 NLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKD----------TTKLMG 156
NLE ++++KP +V S + L++IAP F F D + M
Sbjct: 88 NLELLTEMKPSFMVWS-AGYGPSPEMLARIAPGR----GFNFSDGKQPLAMARKSLTEMA 142

Query: 157 KALGKEKEAEDLLKKYDDKVAAFQKDAKAKY--KDAWPLKASVVNF-RADHTRIYA-GGY 212
L + AE L +Y+D F + K ++ + A PL + H ++
Sbjct: 143 DLLNLQSAAETHLAQYED----FIRSMKPRFVKRGARPL--LLTTLIDPRHMLVFGPNSL 196

Query: 213 AGEILNDLGFK 223
EIL++ G
Sbjct: 197 FQEILDEYGIP 207


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0104SYCECHAPRONE310.002 Gram-negative bacterial type III secretion SycE cha...
		>SYCECHAPRONE#Gram-negative bacterial type III secretion SycE

chaperone signature.
Length = 130

Score = 31.2 bits (70), Expect = 0.002
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 25 VDALTEALTAHAHNDFVQ-PLKPYLRQDPENGH 56
+D E T +HN F Q LKP L D GH
Sbjct: 54 LDNNDEKETLLSHNIFSQDILKPILSWDEVGGH 86


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0105PF04183316e-103 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 316 bits (812), Expect = e-103
Identities = 119/527 (22%), Positives = 208/527 (39%), Gaps = 46/527 (8%)

Query: 79 RVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQLAKQLSELDLASHPFV-- 136
R + +P+ A + + +S +++ T L + L++ +
Sbjct: 66 RCADEPVLAQTLLMQLKQVL-SMSDATVAEHMQDLYATLLGDLQLLKARRGLSASDLINL 124

Query: 137 -MSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVAAVKKTHMIHGDTANI 195
L P K +RG + + Y E +F L AVK+ HMI +
Sbjct: 125 NADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHWLAVKREHMIWRCDNEM 184

Query: 196 DELENLTVPIKEQA----TDMLNDQGLSIDDYVLFPVHPWQYQHILPNVFATEISEKLVV 251
D + LT + Q + + + GL +++ PVHPWQ+Q + F + +E +V
Sbjct: 185 DIHQLLTAAMDPQEFARFSQVWQENGLD-HNWLPLPVHPWQWQQKIATDFIADFAEGRMV 243

Query: 252 LLPLKFGD-YLSSSSMRSLIDIGAPYN-HVKVPFAMQSLGALRLTPTRYMKNGEQAEQLL 309
L +FGD +L+ S+R+L + +K+P + + R P RY+ G A + L
Sbjct: 244 SLG-EFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRYIAAGPLASRWL 302

Query: 310 RQLIEKDEALAKYVMV-CDETA-------WWSYMGQDNDIFKDQLGHLTVQLRKYPEVLA 361
+Q+ D L + V E A ++ + + +++ LG V R+ P
Sbjct: 303 QQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEMLG---VIWRENPCRWL 359

Query: 362 KNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFM-QYGAL 420
K D + V MA L D + + S D T + +V + + +YG
Sbjct: 360 KPD-ESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQLFRVVVVPLYHLLCRYGVA 418

Query: 421 PELHGQNILLSFEDGRVQKCVLRD-HDTVRIYKPWLTAHQLSLPKYV--VREDTPNTLIN 477
HGQNI L+ ++G Q+ +L+D +R+ K SLP+ V V +
Sbjct: 419 LIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMD-SLPQEVRDVTSRLSADYLI 477

Query: 478 EDLETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQL 537
DL+T V + I + GV E LL +L + + Q+
Sbjct: 478 HDLQTGHF--------VTVLRFISPLMVRLGVPERRFYQLLAAVLSDYMK-----KHPQM 524

Query: 538 AVRHILFDKQTWPFKQILLP---LLY-QRDSGGGSMPSGLTTVPNPM 580
+ R LF +++L L + D G +P+ L + NP+
Sbjct: 525 SERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEDLQNPL 571


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0106TCRTETA802e-18 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 79.9 bits (197), Expect = 2e-18
Identities = 71/372 (19%), Positives = 149/372 (40%), Gaps = 24/372 (6%)

Query: 13 ILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKL 72
++ + + G+ +++P+LP + L + ++ GI +A A+ +P+ G L
Sbjct: 9 VILSTVALDAVGIGLIMPVLPGLLRDL--VHSNDVTAHYGILLALYALMQFACAPVLGAL 66

Query: 73 GDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVDASSAFASAEAPA 132
D+ R+ ++L +L G AV +MA + R++ G+ G + A+ +
Sbjct: 67 SDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIADITDG 126

Query: 133 EDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIVCIFGALKLIETT 192
++R + G + + G + GP++GG+ A + A + + + G L E+
Sbjct: 127 DERARHFGFMSACFGFGMVAGPVLGGLMGGF-SPHAPFFAAAALNGLNFLTGCFLLPESH 185

Query: 193 HMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTALSPLASSVNHTAI 252
+ SF+ + V A A++ ++ + + +++
Sbjct: 186 KGERRPLRREALNPLASFR--------WARGMTVVAALMAVFFIMQLVGQVPAALWVIFG 237

Query: 253 DDR-----SVIGFLQSAF-WTASILSAPLWGRFNDKSYVKSVYIFATIACGCSAILQGLA 306
+DR + IG +AF S+ A + G + + + IA G IL A
Sbjct: 238 EDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFA 297

Query: 307 TNIEFLMAARILQGLTYSAL--IQSVMFVVVNACHQ-QLKGTFVGTTNSMLVVGQIIGSL 363
T +L + +Q+++ V+ Q QL+G+ T+ + I+G L
Sbjct: 298 TRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTS----LTSIVGPL 353

Query: 364 SGAAITSYTTPA 375
AI + +
Sbjct: 354 LFTAIYAASITT 365


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0107PF041833014e-97 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 301 bits (772), Expect = 4e-97
Identities = 118/540 (21%), Positives = 212/540 (39%), Gaps = 63/540 (11%)

Query: 3 NKELIQHAAYAAIERILNEYFREENLYQVPPQNHQWSIQLSELE-TLTGEFRYWSAMGHH 61
N + + ++L+E E+ + + ++ I L + E W G
Sbjct: 2 NHKDWDLVNRRLVAKMLSELEYEQVFHAESQGDDRYCINLPGAQWRFIAERGIW---GW- 57

Query: 62 MYHPEVWLIDGKSKKITTYKEAIARILQHMAQSADNQTA-VQQHMAQIMSDI--DNSIHR 118
ID ++ + +L + Q A V +HM + + + D + +
Sbjct: 58 ------LWIDAQTLRCADEPVLAQTLLMQLKQVLSMSDATVAEHMQDLYATLLGDLQLLK 111

Query: 119 TARYLQSNTIDYVEDRYIVSEQSLYLGHPFHPTPKSASGFSEADLEKYAPECHTSFQLHY 178
R L ++ + + Q L GHP K G+ + LE+YAPE +F+LH+
Sbjct: 112 ARRGLSASDL---INLNADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHW 168

Query: 179 LAVHQD-------------VLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPTHPY 225
LAV ++ LLT ++ +E ++Q +D +++ LP HP+
Sbjct: 169 LAVKREHMIWRCDNEMDIHQLLTAAMDPQEFARFSQVWQENGLD-----HNWLPLPVHPW 223

Query: 226 QINVLRQHPQYMQYSEQGLIKDLGVSGDLVYPTSSVRTVF--SKALNIYLKLPIHVKITN 283
Q ++ +G + LG GD S+RT+ S+ + +KLP+ + T+
Sbjct: 224 QWQQK-IATDFIADFAEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTS 282

Query: 284 FIRTNDLEQIERTIDAAQVIASVKDE-----------VETPHFKLMFEEGYRALLPNPLG 332
R I A++ + V + P + EGY AL P
Sbjct: 283 CYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYR 342

Query: 333 QTVEPEMDLLTNSAMIVREGIPNY-HADKDIHVLASLFETMPD-SPISKLAQVIEQSGLA 390
EM +I RE + D+ ++A+L E + P+ I++SGL
Sbjct: 343 YQ---EM-----LGVIWRENPCRWLKPDESPVLMATLMECDENNQPL--AGAYIDRSGLD 392

Query: 391 PEAWLECYLDRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEG-ICLSRT 449
E WL ++P+ L G++L AH QN + +K+G+P ++D +G + L +
Sbjct: 393 AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKE 452

Query: 450 IATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWQLVA 509
E +P V + + A D H L+ V L + + + E +QL+A
Sbjct: 453 EFPEMDSLPQEVRDVTSRLSA-DYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQLLA 511


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0108PF04183514e-179 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 514 bits (1324), Expect = e-179
Identities = 146/592 (24%), Positives = 257/592 (43%), Gaps = 40/592 (6%)

Query: 1 MNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFD 60
MN + V R++ +++S L YE + + A Q G + I +++RF AE+ +
Sbjct: 1 MNHKDWDLVNRRLVAKMLSELEYEQV--FHAESQ-GDDRYCINLPGAQWRFIAERG-IWG 56

Query: 61 RIRITSPIERVVGDEADTTTDYTQLLREAVFTFPKNDEKLEQFIVELLQTELKDTQSMQY 120
+ I + R AD LL + +D + + + +L T L D Q ++
Sbjct: 57 WLWIDAQTLRC----ADEPVLAQTLLMQLKQVLSMSDATVAEHMQDLYATLLGDLQLLKA 112

Query: 121 RESNPPATPETFN-DYEFYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNVKLQWLAID 179
R + N D + GH K R G+ ++ P++ +L WLA+
Sbjct: 113 RRGLSASDLINLNADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHWLAVK 172

Query: 180 KDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEASGKHVNDVEMIPVHPWQFEHVIQV 239
++ + + ++++L + + + F Q + +G N + +PVHPWQ++ I
Sbjct: 173 REHMIWRCDNEMDIHQLLTAAMDPQEFARFSQVWQENGLDHNWL-PLPVHPWQWQQKIAT 231

Query: 240 DLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTT-KYYLKVPISITNTSTKRVLAPHT 298
D + G ++ LGE + + QQS+RT++ +K+P++I NTS R +
Sbjct: 232 DFIADFAEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRY 291

Query: 299 IENAAQITDWLKQIQQQDMYLKDE----LKTVFLGEVLGQSYLNTQLSPYKQTQVYGALG 354
I + WL+Q+ D L L G V + Y +PY+ ++ LG
Sbjct: 292 IAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEM---LG 348

Query: 355 VIWRENIYHMLIDEEDAIPFNALYASDKDGLPFIEKWIKQYG--SEAWTKQFLAVAIRPM 412
VIWREN L +E + L D++ P +I + G +E W Q V + P+
Sbjct: 349 VIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQLFRVVVVPL 408

Query: 413 IHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPE 472
H+L +G+A +H QN+ L + G P R+ LKDF +R +E E S +P+
Sbjct: 409 YHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMDS------LPQ 462

Query: 473 AHKKVNSNSFIETDDERLVRDFLH---DAFFFINIAEIILFIEKQYGIDEQRQWQWVKDI 529
+ V S RL D+L F+ + I + + G+ E+R +Q + +
Sbjct: 463 EVRDVTS---------RLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQLLAAV 513

Query: 530 IEAYQEAFPELNN-YQHFDLFEPTIQVEKLTTRRL-LSDSELRIHHVTNPLG 579
+ Y + P+++ + F LF P I L +L D + + N L
Sbjct: 514 LSDYMKKHPQMSERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLE 565


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0113DHBDHDRGNASE1284e-38 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig...
		>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

signature.
Length = 261

Score = 128 bits (323), Expect = 4e-38
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 2/250 (0%)

Query: 5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSN 64
K+A +TG AQGIG +A L G +A VD+N E + L ++ A A ADV +
Sbjct: 9 KIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLKAEARHAEAFPADVRD 68

Query: 65 RDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAH 124
+ + + G ++VN AG+ I ++++E+++ + VN GV ++
Sbjct: 69 SAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDEEWEATFSVNSTGVFNASRSVS 128

Query: 125 EQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAP 184
+ G I+ S ++ Y S+K A T+ +LA I N +P
Sbjct: 129 KYMMD-RRSGSIVTVGSNPAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSP 187

Query: 185 GIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYI 244
G +T M S+ + E F + I L ++++P D+++ V FL + +I
Sbjct: 188 GSTETDMQWSLWADENGAEQVIKGSL-ETFKTGIPLKKLAKPSDIADAVLFLVSGQAGHI 246

Query: 245 TGQTIIVDGG 254
T + VDGG
Sbjct: 247 TMHNLCVDGG 256


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0114NUCEPIMERASE2179e-71 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 217 bits (554), Expect = 9e-71
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 33/327 (10%)

Query: 3 RVLITGGAGFIGSHLVDDL-QQDYDVYVLDNYRTG-----KRENIKSLADDHVF--ELDI 54
+ L+TG AGFIG H+ L + + V +DN K+ ++ LA ++D+
Sbjct: 2 KYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDL 61

Query: 55 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIK 114
+ + + + + F+ V ++V S+E P + N+ L +LE + I+
Sbjct: 62 ADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNK--IQ 119

Query: 115 RFIFASSAAVYGDLPDLPKSDQSLI-LPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFF 173
++ASS++VYG +P S + P+S YA K E Y LY +P ++FF
Sbjct: 120 HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFF 179

Query: 174 NVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEH-- 231
V+GP P M K + G RDF Y+ D+ +++ + +
Sbjct: 180 TVYGPWGRPDMALFKFTKAML----EGKSIDVYNYGKMKRDFTYIDDIAEAIIRLQDVIP 235

Query: 232 ---------------KDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDI 276
A YNIG + L++ + + + G + + GD+
Sbjct: 236 HADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGDV 295

Query: 277 KHSYADISNL-KALGFVPKYTVETGLK 302
+ AD L + +GF P+ TV+ G+K
Sbjct: 296 LETSADTKALYEVIGFTPETTVKDGVK 322


3SaurJH9_0154SaurJH9_0186Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_01543150.785722MPA1 family polysaccharide export protein
SaurJH9_01550141.807420hypothetical protein
SaurJH9_0156-1141.755295exopolysaccharide tyrosine-protein kinase
SaurJH9_0157-1121.843890protein-tyrosine-phosphatase
SaurJH9_0158-2111.180104polysaccharide biosynthesis protein CapD
SaurJH9_01590151.285929polysaccharide biosynthesis protein CapD
SaurJH9_01602151.197690NAD-dependent epimerase/dehydratase
SaurJH9_01612141.161895UDP-N-acetylglucosamine 2-epimerase
SaurJH9_01622131.233058acetyltransferase
SaurJH9_01632141.533599hypothetical protein
SaurJH9_01643131.814955O-antigen polymerase
SaurJH9_01652142.515397hypothetical protein
SaurJH9_01662152.089918group 1 glycosyl transferase
SaurJH9_01671152.000196sugar transferase
SaurJH9_01680142.354881NAD-dependent epimerase/dehydratase
SaurJH9_0169-1162.478619UDP-glucose/GDP-mannose dehydrogenase
SaurJH9_0170-1142.509462UDP-N-acetylglucosamine 2-epimerase
SaurJH9_0171-1152.510598heme-degrading monooxygenase IsdI
SaurJH9_01721123.386737hypothetical protein
SaurJH9_01730113.214641hypothetical protein
SaurJH9_01740132.908199aldehyde dehydrogenase
SaurJH9_0175-1151.333229cation diffusion facilitator family transporter
SaurJH9_0176-1140.774371hypothetical protein
SaurJH9_0177-215-0.298093hypothetical protein
SaurJH9_0178116-1.543756ABC transporter
SaurJH9_0179014-2.088913NLPA lipoprotein
SaurJH9_0180015-1.634463binding-protein-dependent transport system inner
SaurJH9_0181120-4.877549Acyl-CoA dehydrogenase-like protein
SaurJH9_0182119-5.198953hypothetical protein
SaurJH9_0183320-5.927633formate dehydrogenase
SaurJH9_0184422-6.356666major facilitator transporter
SaurJH9_0185-114-4.513358thioester reductase domain-containing protein
SaurJH9_0186-214-4.0817864'-phosphopantetheinyl transferase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0163TCRTETA320.004 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 32.1 bits (73), Expect = 0.004
Identities = 61/337 (18%), Positives = 127/337 (37%), Gaps = 33/337 (9%)

Query: 7 TLKVRLISNFLQLIITTAFIPFIALYLTDMLS----QSIVGIYLVGLVVLKFPLSIISGY 62
L V L + L + +P + L D++ + GI L +++F + + G
Sbjct: 6 PLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGA 65

Query: 63 LIEIFPKKLLVLIYQATMVIMLVFMGVFGSHQLWQI-IGFCVAYAIFTIVWGLQFPVMDT 121
L + F ++ ++L+ A + M + LW + IG VA + G V
Sbjct: 66 LSDRFGRRPVLLVSLAGAAVDYAIMAT--APFLWVLYIGRIVAG-----ITGATGAVAGA 118

Query: 122 LIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGYSMLLLFLIAACIFLIVLFILY 181
I D D + + G +LGGLM G+S F AA + +
Sbjct: 119 YIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTGC 178

Query: 182 IWLPQDRNQVKQSDDKRHASRYQKLQIMNIFRSYKLVLKDRNYMLLISGFSIIMMGEFSI 241
LP+ ++ + + + L+ F + ++G+
Sbjct: 179 FLLPESHKGERRPLRREALNPLASFRWARGMTVVAA--------LMAVFFIMQLVGQVPA 230

Query: 242 SSYIAIRLKDQF--ETISIGSYDITGAKMLAILLMINTVVVILLTYSISKVVLKIDFKKA 299
+ + I +D+F + +IG LA +++++ ++T ++ ++ ++A
Sbjct: 231 ALW-VIFGEDRFHWDATTIGI-------SLAAFGILHSLAQAMITGPVAA---RLGERRA 279

Query: 300 LITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGEII 336
L+ G++ GY L + + + M++ G I
Sbjct: 280 LMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIG 316


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0164NUCEPIMERASE538e-09 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 52.9 bits (127), Expect = 8e-09
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 55/266 (20%)

Query: 2046 NTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFS----EETVE 2101
L+TGA GF+G ++ + L H++ + D NLNDY+ + +E
Sbjct: 2 KYLVTGAAGFIGFHVSKRLLEAGHQV---VGID-----------NLNDYYDVSLKQARLE 47

Query: 2102 MM----LSNIEVIVGDFECMDDVVLPENMDTIIH----AGARTDHFGDDDEFEKVNVQGT 2153
++ ++ + D E M D+ + + + R + + N+ G
Sbjct: 48 LLAQPGFQFHKIDLADREGMTDLFASGHFERVFISPHRLAVR-YSLENPHAYADSNLTGF 106

Query: 2154 VDVIRLAQQHH-ARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSE 2211
++++ + + L+Y S+ SV G + FS D + S Y +K +E
Sbjct: 107 LNILEGCRHNKIQHLLYASSSSVYG-----LNRKMPFSTDDSVDHPV--SLYAATKKANE 159

Query: 2212 LKVLEAVNN-GLDGRIVRVGNLTSPYNGRWHM------RNIKTNRFSMVMNDLLQLDCIG 2264
L + GL +R + P+ GR M + + + V N
Sbjct: 160 LMAHTYSHLYGLPATGLRFFTVYGPW-GRPDMALFKFTKAMLEGKSIDVYNY-------- 210

Query: 2265 VSMAEMPVDFSFVDTTARQIVALAQV 2290
+M DF+++D A I+ L V
Sbjct: 211 ---GKMKRDFTYIDDIAEAIIRLQDV 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0165ENTSNTHTASED290.009 Enterobactin synthetase component D signature.
		>ENTSNTHTASED#Enterobactin synthetase component D signature.

Length = 234

Score = 29.2 bits (65), Expect = 0.009
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 84 GQP-----IYVSLSYSYPYIVCVVDKEPVGIDIEKISQRLDWRTLVTCFSTNEAHQI 135
QP ++ S+S+ + V+ ++ +GIDIEKI + L ++ QI
Sbjct: 76 RQPLWPDGLFGSISHCATTALAVISRQRIGIDIEKIMSQHTATELAPSIIDSDERQI 132


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0167CARBMTKINASE320.002 Bacterial carbamate kinase signature.
		>CARBMTKINASE#Bacterial carbamate kinase signature.

Length = 314

Score = 31.7 bits (72), Expect = 0.002
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 155 INADTLAYFIASSLKAPIYV-LSNIAGVLIN-----DVVIPQLPLVDIHQYIEHGD-IYG 207
I+ D +A + A I++ L+++ G + + + ++ + ++ +Y E G G
Sbjct: 213 IDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGHFKAG 272

Query: 208 GMIPKVLDAKNAIENGCPKVIIAS 231
M PKVL A IE G + IIA
Sbjct: 273 SMGPKVLAAIRFIEWGGERAIIAH 296


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0172ISCHRISMTASE604e-13 Isochorismatase signature.
		>ISCHRISMTASE#Isochorismatase signature.

Length = 312

Score = 59.6 bits (144), Expect = 4e-13
Identities = 31/99 (31%), Positives = 51/99 (51%)

Query: 86 LDKRDDDFVIDKRHFSAFVGTDLDLQLRRRGIDTIVLGGVATHIGVDTTARDAYQLNYNQ 145
L DDD V+ K +SAF T+L +R+ G D +++ G+ HIG TA +A+ +
Sbjct: 112 LAPEDDDLVLTKWRYSAFKRTNLLEMMRKEGRDQLIITGIYAHIGCLVTACEAFMEDIKA 171

Query: 146 FFVTDMMSAQNETLHQFPIDNVFPLMGQTITTNDFLNIL 184
FFV D ++ + HQ ++ T+ T+ L+ L
Sbjct: 172 FFVGDAVADFSLEKHQMALEYAAGRCAFTVMTDSLLDQL 210


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0178DNABINDINGHU300.002 Prokaryotic integration host factor signature.
		>DNABINDINGHU#Prokaryotic integration host factor signature.

Length = 91

Score = 30.4 bits (69), Expect = 0.002
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 15/75 (20%)

Query: 86 ELIENESVETLKNKMIARATNTMRFVATNIMDAQIDAICDVLKNARTIFLFGFGASSLTI 145
+LI +A AT + + +DA A+ L + L GFG +
Sbjct: 6 DLIA----------KVAEATELTKKDSAAAVDAVFSAVSSYLAKGEKVQLIGFGNFEVR- 54

Query: 146 GDLFQKLSRIGLNVR 160
++ +R G N +
Sbjct: 55 ----ERAARKGRNPQ 65


4SaurJH9_0272SaurJH9_0283Y        NNGenomic Island
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0272318-0.0506292-C-methyl-D-erythritol 4-phosphate
SaurJH9_0273217-0.805941alcohol dehydrogenase
SaurJH9_0274218-1.810298CDP-glycerol:poly(glycerophosphate)
SaurJH9_0275219-1.617038CDP-glycerol:poly(glycerophosphate)
SaurJH9_0276318-2.2737422-C-methyl-D-erythritol 4-phosphate
SaurJH9_0277621-4.751399alcohol dehydrogenase
SaurJH9_0278319-5.064793CDP-glycerol:poly(glycerophosphate)
SaurJH9_0279722-4.518407glycosyl transferase family protein
SaurJH9_0280921-4.043411cell wall biosynthesis protein ScdA
SaurJH9_02811118-4.221741signal transduction histidine kinase LytS
SaurJH9_0282818-3.928456two-component response regulator
SaurJH9_0283214-2.934811murein hydrolase regulator LrgA
5SaurJH9_0304SaurJH9_0370Y        Y        YPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0304419-2.498670hypothetical protein
SaurJH9_0305617-2.997817hypothetical protein
SaurJH9_0306618-2.412728CHAP domain-containing protein
SaurJH9_0307418-1.403744hypothetical protein
SaurJH9_03082220.393470hypothetical protein
SaurJH9_03091210.107793hypothetical protein
SaurJH9_03101260.475816hypothetical protein
SaurJH9_03111240.453383hypothetical protein
SaurJH9_03121230.670307hypothetical protein
SaurJH9_03133290.041351hypothetical protein
SaurJH9_0314621-2.299343hypothetical protein
SaurJH9_0315620-1.543229cell division protein FtsK
SaurJH9_0316518-1.234692hypothetical protein
SaurJH9_0317420-0.950038hypothetical protein
SaurJH9_0318319-1.083155hypothetical protein
SaurJH9_0319320-0.771929hypothetical protein
SaurJH9_03201221.226762hypothetical protein
SaurJH9_03221261.701138hypothetical protein
SaurJH9_03232281.236434hypothetical protein
SaurJH9_03243261.751530hypothetical protein
SaurJH9_03255271.214767hypothetical protein
SaurJH9_03265260.549814hypothetical protein
SaurJH9_03273240.211245hypothetical protein
SaurJH9_0328322-1.025895hypothetical protein
SaurJH9_0329623-0.634308hypothetical protein
SaurJH9_0330423-1.237060hypothetical protein
SaurJH9_0331422-0.961697hypothetical protein
SaurJH9_0332524-0.352917hypothetical protein
SaurJH9_0333524-2.049767hypothetical protein
SaurJH9_0334628-1.845481hypothetical protein
SaurJH9_0335627-2.140349formate/nitrite transporter
SaurJH9_0336629-0.899596branched-chain amino acid transport system II
SaurJH9_03373250.057273hypothetical protein
SaurJH9_03381230.6134625'-nucleotidase
SaurJH9_03393251.957062hypothetical protein
SaurJH9_03404252.150008hypothetical protein
SaurJH9_03413252.897260hypothetical protein
SaurJH9_03424252.941608ABC transporter
SaurJH9_03435273.660522phosphotransferase system fructose-specific IIC
SaurJH9_03446304.310887hypothetical protein
SaurJH9_03455274.463812ribokinase-like domain-containing protein
SaurJH9_03463264.372340hypothetical protein
SaurJH9_03473294.260669Na+ dependent nucleoside transporter
SaurJH9_03482284.234928hypothetical protein
SaurJH9_03493274.458288SSS family solute/sodium (Na+) symporter
SaurJH9_03503254.931792N-acetylneuraminate lyase
SaurJH9_03512254.055791ROK family protein
SaurJH9_03523253.971133RpiR family transcriptional regulator
SaurJH9_03531243.488987N-acetylmannosamine-6-phosphate 2-epimerase
SaurJH9_03542233.343620nucleoside recognition domain-containing
SaurJH9_03552233.239405triacylglycerol lipase
SaurJH9_03562222.293092hypothetical protein
SaurJH9_03572232.424258phage integrase family protein
SaurJH9_03581212.816738hypothetical protein
SaurJH9_03590212.495691hypothetical protein
SaurJH9_03601212.092808hypothetical protein
SaurJH9_03611192.266010hypothetical protein
SaurJH9_03622193.533733hypothetical protein
SaurJH9_03632193.859416XRE family transcriptional regulator
SaurJH9_0364-1182.919673XRE family transcriptional regulator
SaurJH9_0365-2154.409115hypothetical protein
SaurJH9_0366-2164.619543phage antirepressor protein
SaurJH9_0367-1124.497304hypothetical protein
SaurJH9_03680133.362148hypothetical protein
SaurJH9_03691123.178534hypothetical protein
SaurJH9_03701163.748547hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0306VACJLIPOPROT287e-04 VacJ lipoprotein signature.
		>VACJLIPOPROT#VacJ lipoprotein signature.

Length = 251

Score = 27.6 bits (61), Expect = 7e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 1 MKRLLSLLLASALILSACGSNDGDKKGESKKTEKY 35
MK LS L +L C S+ D++G S E +
Sbjct: 1 MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGF 35


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0319CHANLCOLICIN340.002 Channel forming colicin signature.
		>CHANLCOLICIN#Channel forming colicin signature.

Length = 522

Score = 33.9 bits (77), Expect = 0.002
Identities = 47/240 (19%), Positives = 94/240 (39%), Gaps = 19/240 (7%)

Query: 242 KQEIEQLENERIDIQNGAEEINLRNQLADKQSELKRIEANNSASNENKIHALTNELHVEN 301
++EIE+ + E AE +LA E K +E K+ A +E+ +
Sbjct: 157 RKEIEREKAETERQLKLAEAEE--KRLAALSEEAKAVEIAQK-----KLSAAQSEVVKMD 209

Query: 302 GTVANLKTRLKQNKQQITHEENRR-NQLLENHKGLKS--DLEKAKNQKFEYLDDNVCSCC 358
G + L +RL + E + E + +L++ + +D + +
Sbjct: 210 GEIKTLNSRLSSSIHARDAEMKTLAGKRNELAQASAKYKELDELVKKLSPRANDPLQNRP 269

Query: 359 GQQLPAEQVSEVREKALQKFNANKSKELETIQTSINHIISEGKKIKPIIEKLEDDNNNLQ 418
+ +V K K K++ +T IN I ++ +I+ I ++ ++ N
Sbjct: 270 FFEATRRRVGA------GKIREEKQKQVTASETRINRINADITQIQKAISQVSNNRNAGI 323

Query: 419 IKINEAEERSARIQNKINKLKITHVDVTQTDEYKAVMLEINEINQKRSNIRKTIQDKVSG 478
+++EAEE + QN + +I Y+ + + E K S + + + DK G
Sbjct: 324 ARVHEAEENLKKAQNNLLNSQIKDAVDATVSFYQTLTEKYGE---KYSKMAQELADKSKG 380


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0326PF06580280.015 Sensor histidine kinase
		>PF06580#Sensor histidine kinase

Length = 349

Score = 27.5 bits (61), Expect = 0.015
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 5/36 (13%)

Query: 67 ERLEQARLERKLERQRKKEAELR----RKKPH-LFN 97
+ +QA +++ +EA+L + PH +FN
Sbjct: 142 KNYKQAEIDQWKMASMAQEAQLMALKAQINPHFMFN 177


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0332PF07520250.029 Virulence protein SrfB
		>PF07520#Virulence protein SrfB

Length = 1041

Score = 25.3 bits (55), Expect = 0.029
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 3/24 (12%)

Query: 58 IELDEAVGIMTGQVVYKYEEAQEN 81
++ DEA Q+VY Y E +
Sbjct: 548 VDWDEAS---CTQLVYLYSELTQK 568


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0366SECETRNLCASE270.016 Bacterial translocase SecE signature.
		>SECETRNLCASE#Bacterial translocase SecE signature.

Length = 127

Score = 27.2 bits (60), Expect = 0.016
Identities = 16/81 (19%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 22 LLLFIKQITDLFGLDLSTQLNQASAIIGAILTLLTGIGVITDPTSKGVSDSSIAQTYQAP 81
+++ + + G L + + ++ + GV T+KG + + A
Sbjct: 20 VVVVALLLVAIVGNYLYRDIMLPLRALAVVILIAAAGGVALL-TTKGKATVAFA------ 72

Query: 82 RDSSKEEQQVTWKTSQDTSLT 102
R++ E ++V W T Q+T T
Sbjct: 73 REARTEVRKVIWPTRQETLHT 93


6SaurJH9_0439SaurJH9_0474Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0439118-3.454527MATE efflux family protein
SaurJH9_0440-218-2.841865hypothetical protein
SaurJH9_0441-215-2.484971glycerol-3-phosphate transporter
SaurJH9_0442-316-1.110462glyoxalase/bleomycin resistance
SaurJH9_0443-315-0.761362luciferase family protein
SaurJH9_0444-315-0.892599NADPH-dependent FMN reductase
SaurJH9_0445016-1.630580hypothetical protein
SaurJH9_0446114-1.962652hypothetical protein
SaurJH9_0447216-1.898430N-acetyltransferase GCN5
SaurJH9_0448116-2.957423hypothetical protein
SaurJH9_0449115-1.111585hypothetical protein
SaurJH9_0450114-1.740314Dyp-type peroxidase family protein
SaurJH9_0451113-1.797641hypothetical protein
SaurJH9_0452210-1.452425hypothetical protein
SaurJH9_0453210-1.039582Sec-independent periplasmic protein translocase
SaurJH9_045429-1.128106twin arginine-targeting protein translocase
SaurJH9_0455714-3.509799hypothetical protein
SaurJH9_0456712-3.275760XRE family transcriptional regulator
SaurJH9_0457812-3.214253hypothetical protein
SaurJH9_0458919-3.770807ABC transporter
SaurJH9_04591021-3.987660hypothetical protein
SaurJH9_04601021-3.945573hypothetical protein
SaurJH9_04611120-3.574356hypothetical protein
SaurJH9_04631120-3.471695acetyl-CoA acetyltransferase
SaurJH9_04641120-3.412475hypothetical protein
SaurJH9_04651019-3.5632305-
SaurJH9_04661019-3.507630bifunctional homocysteine
SaurJH9_0467918-3.333236cystathionine gamma-synthase
SaurJH9_0468314-1.591196cystathionine gamma-synthase
SaurJH9_04690130.300092parB-like partition protein
SaurJH9_04702163.154059hypothetical protein
SaurJH9_04711163.483621hypothetical protein
SaurJH9_04722153.077634GTP-dependent nucleic acid-binding protein EngD
SaurJH9_04732163.016260hypothetical protein
SaurJH9_04742172.75785530S ribosomal protein S6
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0444NUCEPIMERASE300.009 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 30.1 bits (68), Expect = 0.009
Identities = 28/167 (16%), Positives = 61/167 (36%), Gaps = 32/167 (19%)

Query: 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----------DWRGKVSVRQ 50
M ++TGA G +G H++ + + H +G+ N+ D + +
Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEA--GHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHK 58

Query: 51 LDYFNQESMVEAFK--GMDTVVFI-------PSIIHP-SFKRIPEV--ENLVYAAKQSGV 98
+D ++E M + F + V S+ +P ++ N++ + + +
Sbjct: 59 IDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKI 118

Query: 99 AHIIFIG---YYADQHNNPFHMS-----PYFGYASRLLSTSGIDYTY 137
H+++ Y PF P YA+ + + +TY
Sbjct: 119 QHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTY 165


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0445TOXICSSTOXIN953e-26 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 95.5 bits (237), Expect = 3e-26
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 11/214 (5%)

Query: 18 TGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQY 77
T V S+ Q ++ + +L +Y+ N + + + + +
Sbjct: 25 TPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNS---EVLDNSLGSMRIKNTDGS 81

Query: 78 SQISLVGSDKDKFKDGDNSNIDVFILREGDSRQATN-----YSIGGVTKTNSQPFIDYIH 132
+ + S +D+ R S+ + + I GVT T P I
Sbjct: 82 ISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLP--TPIE 139

Query: 133 TPILEIKKGKEEPQSSLYQIYKEDISLKELDYRLRERAIKQHGLYSNGLKQGQI-TITMK 191
P+ GK+ P + K+ +++ LD+ +R + + HGLY + K G ITM
Sbjct: 140 LPLKVKVHGKDSPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMN 199

Query: 192 DGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEM 225
DG ++ DLS+K E I+ +I+ I E+
Sbjct: 200 DGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0446TOXICSSTOXIN875e-23 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 87.0 bits (215), Expect = 5e-23
Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 22/203 (10%)

Query: 37 ISENSKKLKAYYTQPSIEYKNVTGYISFIQPSIKFMNIIDGNSVNNLALIGKDKQHYHTG 96
++N K L +Y+ S + N + S+ M I + + +L +
Sbjct: 42 TNDNIKDLLDWYSSGSDTFTN----SEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFT 97

Query: 97 VHRNLNIFYVN-----EDKRFEGAKYSIGGITSANDKA--VDLIAEARVIKADHIGEYDY 149
+++ + I G+T+ ++L + +V D +Y
Sbjct: 98 KGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGP 157

Query: 150 DFFPFKIDKEAMSLKEIDFKLRKYLIDNYGLYGEMST----GKITVKKKYYGKYTFELDK 205
F DK+ +++ +DF++R L +GLY KIT+ Y +L K
Sbjct: 158 KF-----DKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDG--STYQSDLSK 210

Query: 206 KLQEDRMSDVINVTDIDRIEIKV 228
K + + IN+ +I IE ++
Sbjct: 211 KFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0447TOXICSSTOXIN942e-24 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 93.6 bits (232), Expect = 2e-24
Identities = 44/223 (19%), Positives = 78/223 (34%), Gaps = 21/223 (9%)

Query: 140 TPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSFEFEKQFGFLLKPWTTVRFM 199
TP P+ S + IK A+ +DL +Y+ S F L ++R
Sbjct: 25 TPVPLSSNQ-------IIKTAKASTNDNIKDLLDWYSSGSDTF-TNSEVLDNSLGSMRIK 76

Query: 200 NVIPNRFIYKIALVGKDEKKYKDGPYDNIDVF-----IVLEDNKYQLKKYSVGGITKTNS 254
N + + + + +D+ ++ + + G+T T
Sbjct: 77 NTDGSI---SLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEK 133

Query: 255 KKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNM--G 312
+ L V + K+++++ LDF++R QL + H LY +
Sbjct: 134 LPTPIELPLKVKVHGKDSPLKYG---PKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKT 190

Query: 313 SGTIVIKMKNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNI 355
G I M +G Y +L KK + + I I IE I
Sbjct: 191 GGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0448TOXICSSTOXIN1018e-28 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 101 bits (252), Expect = 8e-28
Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 13/216 (6%)

Query: 82 TKVETPQSPTTKQVPTEINPKFKDLRAYYTKPSLEFKNEIGIILKKWTTIRFMNIVPDYF 141
T V + K N KDL +Y+ S F N ++ ++R N
Sbjct: 25 TPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTN-SEVLDNSLGSMRIKNTDGSI- 82

Query: 142 IYKIALVGKDDKKYDEGVHRNVDVFVVLEEKNKYGVE----RYSVGGITKSNSKKVDHKA 197
+ + VD+ +K+++ E + + G+T + +
Sbjct: 83 --SLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIEL 140

Query: 198 GVRITKEDNKGTISHDVSEFKITKEQISLKELDFKLRKQLIENHNLYGNV--GSGKIVIN 255
+++ + + K K+Q+++ LDF++R QL + H LY + G I
Sbjct: 141 PLKVKVHGKDSPLKYG---PKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKIT 197

Query: 256 MKNGGKYTFELHKKLQENRMADVIDGTNIDNIEVNI 291
M +G Y +L KK + N I+ I IE I
Sbjct: 198 MNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0449TOXICSSTOXIN1352e-41 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 135 bits (340), Expect = 2e-41
Identities = 49/201 (24%), Positives = 73/201 (36%), Gaps = 14/201 (6%)

Query: 39 NVTKDIFDLRDYYSGASKELKNVTGYRYSKGGKHYLIFDKNRKFTRVQIFGKDIERFKAR 98
+ +I DL D+YS S N S G + + IF
Sbjct: 41 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGS---MRIKNTDGSISLIIFPSPYYSPAFT 97

Query: 99 KNPGLDI-----FVVKEAENRNGTVFSYGGVTKKNQDAYYDYINAPRFQIKRDEGDGIAT 153
K +D+ + F GVT + I P +K D
Sbjct: 98 KGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLP--TPIELPLK-VKVHGKDSPLK 154

Query: 154 YGRVHYIYKEEISLKELDFKLRQYLIQNFDLYKKFPKDSKI-KVIMKDGGYYTFELNKKL 212
YG K+++++ LDF++R L Q LY+ K K+ M DG Y +L+KK
Sbjct: 155 YG--PKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKF 212

Query: 213 QTNRMSDVIDGRNIEKIEANI 233
+ N I+ I+ IEA I
Sbjct: 213 EYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0450TOXICSSTOXIN1921e-63 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 192 bits (488), Expect = 1e-63
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 42 DIKDLYRYYSSESFEFSNI--------SGKVENYNGSNVVRFNQEKQNHQLFLLGKDKDK 93
+IKDL +YSS S F+N S +++N +GS + F G+
Sbjct: 45 NIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGE---- 100

Query: 94 YKKGLEGQNVFVVKELIDPNGRLSTVGGVTKKNNKSSETNTHLFVNKVYGGNLDASIDSF 153
K L + + + + GVT + L V KV+G +
Sbjct: 101 -KVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKV-KVHGKDSPLKYGP- 157

Query: 154 LINKEEVSLKELDFKIRKQLVEKYGLYKGTTKYGKI-TINLKDEKKEVIDLGDKLQFERM 212
+K+++++ LDF+IR QL + +GLY+ + K G I + D DL K ++
Sbjct: 158 KFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTE 217

Query: 213 GDVLNSKDIQNIAVTIN 229
+N +I+ I IN
Sbjct: 218 KPPINIDEIKTIEAEIN 234


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0451TOXICSSTOXIN1252e-37 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 125 bits (314), Expect = 2e-37
Identities = 47/199 (23%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 42 DTNKLHQYYSGPSYELTNV--------SGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENK 93
+ L +YS S TN S + + S L+ F G+
Sbjct: 45 NIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGE---- 100

Query: 94 YKEKTHGLDVFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSID 153
K + + F +SGVT L L K+ KD +
Sbjct: 101 -KVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELP----LKVKVHGKDSP-LK 154

Query: 154 EFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGSA-DKGRIVINMKDENKYEIDLSDKLDF 212
K+++++ LDF+IR L + + LY S G I M D + Y+ DLS K ++
Sbjct: 155 YGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEY 214

Query: 213 ERMADVINSEQIKNIEVNL 231
IN ++IK IE +
Sbjct: 215 NTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0452TOXICSSTOXIN1301e-39 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 130 bits (329), Expect = 1e-39
Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 15/197 (7%)

Query: 43 INMLHQYYSEESFESTNISVKSEDYYGSNVLNFNQRNKTFKVFLLGDDKNKY------KE 96
I L +YS S TN V + + + + + K
Sbjct: 46 IKDLLDWYSSGSDTFTNSEVLD---NSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKV 102

Query: 97 KTHGLDVFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKHGFSINELF 156
+ + + + G+T + P L+VK F
Sbjct: 103 DLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLP--TPIELP-LKVKVHGKDSPLKYGPKF 159

Query: 157 FIQKEEVSLKELDFKIRKMLVEKYRLYKGAS-DKGRIVINMKDEKKYVIDLSEKLSFDRM 215
K+++++ LDF+IR L + + LY+ + G I M D Y DLS+K ++
Sbjct: 160 --DKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTE 217

Query: 216 FDVMDSKQIKNIEVNLN 232
++ +IK IE +N
Sbjct: 218 KPPINIDEIKTIEAEIN 234


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0453TOXICSSTOXIN1934e-64 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 193 bits (491), Expect = 4e-64
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 10/202 (4%)

Query: 31 KQNQKSVNKHDKEALYRYYTGKTMEMKNISALKHGKNNLRFKFRGIKIQVLLPGNDKSKF 90
K + S N + K+ L Y +G + N L + ++R K I +++ +
Sbjct: 36 KTAKASTNDNIKDLLDWYSSG-SDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSP 94

Query: 91 QQRSYEGLDVFFVQEKRDKHD-----IFYTVGGVIQNNKTSGVVSAPILNISKEKGEDAF 145
E +D+ + K+ +H I + + GV K + P L + K G+D+
Sbjct: 95 AFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELP-LKV-KVHGKDSP 152

Query: 146 VKGYPYYIKKEKITLKELDYKLRKHLIEKYGLYKTISKDGRV-KISLKDGSFYNLDLRSK 204
+K Y K+++ + LD+++R L + +GLY++ K G KI++ DGS Y DL K
Sbjct: 153 LK-YGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKK 211

Query: 205 LKFKYMGEVIESKQIKDIEVNL 226
++ I +IK IE +
Sbjct: 212 FEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0456TOXICSSTOXIN1084e-31 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 108 bits (270), Expect = 4e-31
Identities = 47/225 (20%), Positives = 86/225 (38%), Gaps = 19/225 (8%)

Query: 16 LTTGMITTTAQPVKASTLEVRSQAT-------QDLSEYYKGRGFELTNVTGYKYG-NKVT 67
L T PV S+ ++ A +DL ++Y TN +
Sbjct: 15 LLLATTATDFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMR 74

Query: 68 FIDNSQQIDVTLTGNE----KLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKTNGT 123
+ I + + + T + +++ + S+ + I I G+T T
Sbjct: 75 IKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTE-- 132

Query: 124 QHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEISLKELDFKLRKHLIDKHDLYKTEP 183
T + L V K G+ S K+++++ LDF++R L H LY++
Sbjct: 133 -KLPTPIELPLKV-KVHGK--DSPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSD 188

Query: 184 KDSKI-RITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL 227
K +ITM +G Y +L+KK + + I+ I+ IE +
Sbjct: 189 KTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0463BCTERIALGSPC310.002 Bacterial general secretion pathway protein C signa...
		>BCTERIALGSPC#Bacterial general secretion pathway protein C

signature.
Length = 272

Score = 31.5 bits (71), Expect = 0.002
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 177 INSNVPSYDAKFKMSNKDENVKQLRSRYNIPTDKAPILKMHIDGDLKGSSVGYKKLEIDF 236
+N VP Y+AK D V Q + RY + + + S G +++
Sbjct: 124 VNEEVPGYNAKIVSIRPDRVVLQYQGRYEV---------LGLYSQEDSGSDGVPGAQVNE 174

Query: 237 SKEENSELSIVDSLNFQPAKNKD 259
++ + ++ D ++F P N +
Sbjct: 175 QLQQRASTTMSDYVSFSPIMNDN 197


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0466BCTERIALGSPC353e-04 Bacterial general secretion pathway protein C signa...
		>BCTERIALGSPC#Bacterial general secretion pathway protein C

signature.
Length = 272

Score = 34.6 bits (79), Expect = 3e-04
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 181 INENVPSYDAKFKMSNKDENVKQLRSRYNIPTDKAPVLKMHIDGDLKGSSVGYKKLEIDF 240
+NE VP Y+AK D V Q + RY + + + S G +++
Sbjct: 124 VNEEVPGYNAKIVSIRPDRVVLQYQGRYEV---------LGLYSQEDSGSDGVPGAQVNE 174

Query: 241 SKGEKSDLSVIDSLNFQPAKVDE 263
+++ ++ D ++F P D
Sbjct: 175 QLQQRASTTMSDYVSFSPIMNDN 197


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0471adhesinb270.014 Adhesin B signature.
		>adhesinb#Adhesin B signature.

Length = 310

Score = 27.1 bits (60), Expect = 0.014
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 14 DISTTVETLNLISKMEAQKENIRSVIAPEHKHKYKDIENGLKGEE---KVLIEQMAQHCE 70
+S V+ + L + E KE+ H + ++ENG+ + K L E+ + E
Sbjct: 118 AVSEGVDVIYLEGQSEKGKED---------PHAWLNLENGIIYAQNIAKRLSEKDPANKE 168

Query: 71 AFKANFKGAAQ--GDWVKSAMSEIDSIKDDLKKI 102
++ N K + K A + ++I + K I
Sbjct: 169 TYEKNLKAYVEKLSALDKEAKEKFNNIPGEKKMI 202


7SaurJH9_0553SaurJH9_0569Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0553216-1.696694NADH dehydrogenase subunit 5
SaurJH9_0554118-0.997136hypothetical protein
SaurJH9_0555216-0.757575hypothetical protein
SaurJH9_05563200.209323hypothetical protein
SaurJH9_05577282.349320hypothetical protein
SaurJH9_05589322.498081hypothetical protein
SaurJH9_05596272.469083hypothetical protein
SaurJH9_05602293.297157sodium:neurotransmitter symporter
SaurJH9_05613302.911150hypothetical protein
SaurJH9_05623282.799550pyridoxal-5'-phosphate-dependent protein subunit
SaurJH9_05633282.807427cystathionine gamma-synthase
SaurJH9_05643282.940003ABC transporter
SaurJH9_05654343.616122binding-protein-dependent transport system inner
SaurJH9_05664414.035116NLPA lipoprotein
SaurJH9_05673404.448459hypothetical protein
SaurJH9_05681363.952982CHAP domain-containing protein
SaurJH9_05690323.555223hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0558SECETRNLCASE375e-07 Bacterial translocase SecE signature.
		>SECETRNLCASE#Bacterial translocase SecE signature.

Length = 127

Score = 36.8 bits (85), Expect = 5e-07
Identities = 14/55 (25%), Positives = 28/55 (50%)

Query: 6 SFFKGVKSEMEKTSWPTKEELFKYTVIVVSTVIFFLVFFYALDLGITALKNLLFG 60
+F + ++E+ K WPT++E T+IV + + + LD + L + + G
Sbjct: 70 AFAREARTEVRKVIWPTRQETLHTTLIVAAVTAVMSLILWGLDGILVRLVSFITG 124


8SaurJH9_0633SaurJH9_0645Y        NNGenomic Island
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0633114-3.372634PilT domain-containing protein
SaurJH9_0634-113-3.956317glutamyl-tRNA synthetase
SaurJH9_0635-112-3.842642serine O-acetyltransferase
SaurJH9_0636-114-4.334220cysteinyl-tRNA synthetase
SaurJH9_0637-214-4.433895hypothetical protein
SaurJH9_0638-314-3.573060RNA methyltransferase
SaurJH9_0640013-2.575658hypothetical protein
SaurJH9_0641113-2.151114ECF subfamily RNA polymerase sigma-24 factor
SaurJH9_0642115-2.09924550S ribosomal protein L33
SaurJH9_0643012-1.493825preprotein translocase subunit SecE
SaurJH9_0644112-1.960385transcription antitermination protein
SaurJH9_0645212-1.72744950S ribosomal protein L11
9SaurJH9_0671SaurJH9_0698Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_06713101.662692cell wall anchor domain-containing protein
SaurJH9_06724100.968574hypothetical protein
SaurJH9_067319-0.055106cell wall anchor domain-containing protein
SaurJH9_0674110-1.201027hypothetical protein
SaurJH9_0675110-1.398118Poly(glycerol-phosphate)
SaurJH9_0676011-1.685117Poly(glycerol-phosphate)
SaurJH9_0677011-1.933556GTP cyclohydrolase
SaurJH9_0678-112-2.440950hypothetical protein
SaurJH9_0679-113-2.395834hypothetical protein
SaurJH9_0680-211-3.074433glucosamine/galactosamine-6-phosphate isomerase
SaurJH9_0681-211-3.322896orotidine 5'-phosphate decarboxylase
SaurJH9_0682-39-3.755118sugar isomerase (SIS)
SaurJH9_0683-38-2.738219HAD family hydrolase
SaurJH9_0684-29-1.830300major facilitator transporter
SaurJH9_0685-18-2.049964hypothetical protein
SaurJH9_0686-29-2.652833AMP-dependent synthetase and ligase
SaurJH9_0687010-3.111713acetyl-CoA acetyltransferase
SaurJH9_068809-2.147010hypothetical protein
SaurJH9_0689-112-3.058054hypothetical protein
SaurJH9_0690015-4.404663hypothetical protein
SaurJH9_0691-116-3.903770phosphomethylpyrimidine kinase
SaurJH9_0692014-1.770743uracil-DNA glycosylase
SaurJH9_0693114-1.228431hypothetical protein
SaurJH9_0694112-2.535536hypothetical protein
SaurJH9_0695212-2.918782hypothetical protein
SaurJH9_0696112-2.858444amino acid permease
SaurJH9_0697311-3.099451hypothetical protein
SaurJH9_0698214-3.163222hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0680SACTRNSFRASE473e-09 Streptothricin acetyltransferase signature.
		>SACTRNSFRASE#Streptothricin acetyltransferase signature.

Length = 173

Score = 47.2 bits (112), Expect = 3e-09
Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 3/97 (3%)

Query: 50 EYITSPHKVIFVAESDEQLVGFAFVNTTPFQRIKHVAKIDLGVKKLYQHRGIGQALLDAI 109
Y+ K F+ + +G + + + + D+ V K Y+ +G+G ALL
Sbjct: 58 SYVEEEGKAAFLYYLENNCIGRIKIRSN-WNGYALIE--DIAVAKDYRKKGVGTALLHKA 114

Query: 110 MAWCLNNQIHRIEANVPLNNQPALELFKSADFQIEGV 146
+ W N + N A + F I V
Sbjct: 115 IEWAKENHFCGLMLETQDINISACHFYAKHHFIIGAV 151


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0682HTHFIS645e-14 FIS bacterial regulatory protein HTH signature.
		>HTHFIS#FIS bacterial regulatory protein HTH signature.

Length = 484

Score = 63.7 bits (155), Expect = 5e-14
Identities = 26/111 (23%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 3 ILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYW 62
IL+ +DD + L + L + ++V + + + + ++V+ DV +P + F
Sbjct: 6 ILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDGDLVVTDVVMPDENAFDL 65

Query: 63 CRKMREV-SNVPILFLSSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQ 112
++++ ++P+L +S+++ M + + E GA DY+ KPF LI +
Sbjct: 66 LPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIGIIG 116


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0684PF05272361e-04 Virulence-associated E family protein
		>PF05272#Virulence-associated E family protein

Length = 892

Score = 36.2 bits (83), Expect = 1e-04
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 8/56 (14%)

Query: 40 GPSGSGKTTLLNVLSSIDYISQGSITLKGKK--LEKLSNK------ELSDIRKHDI 87
G G GK+TL+N L +D+ S + K E+++ E++ R+ D
Sbjct: 603 GTGGIGKSTLINTLVGLDFFSDTHFDIGTGKDSYEQIAGIVAYELSEMTAFRRADA 658


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0697TCRTETA567e-11 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 56.4 bits (136), Expect = 7e-11
Identities = 73/365 (20%), Positives = 134/365 (36%), Gaps = 41/365 (11%)

Query: 9 KNYKLFVA--NMFLLGMGIAVTVPYLVLFATKDLGMTTNQ---YGLLLASAAISQFTVNS 63
N L V + L +GI + +P L +DL + + YG+LLA A+ QF
Sbjct: 3 PNRPLIVILSTVALDAVGIGLIMPVLP-GLLRDLVHSNDVTAHYGILLALYALMQFACAP 61

Query: 64 IIARFSDTHHFNRKIIIILALLMGALGFSIYFFVDTIWLFILLYAIFQGLFAPAMPQLYA 123
++ SD F R+ +++++L A+ ++I +W+ + + I G+
Sbjct: 62 VLGALSD--RFGRRPVLLVSLAGAAVDYAIMATAPFLWV-LYIGRIVAGITGATGA---V 115

Query: 124 SARESINVSSSKDRAQFANTVLRSMFSLGFLFGPFIGAQLIGLKGYAGLFGGTISIILFT 183
+ +++ +RA+ + + F G + GP +G + G +A F L
Sbjct: 116 AGAYIADITDGDERARHFG-FMSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNF 174

Query: 184 LVLQVFFYKDLNIKHPISTQQHVEKIAPNMFKDKTL--------LLPFIAFILLHIGQWM 235
L + ++ + + A N L + FI+ +GQ
Sbjct: 175 LTGCFLLPESHK-----GERRPLRREALNPLASFRWARGMTVVAALMAVFFIMQLVGQVP 229

Query: 236 YTMNMPLFVTDYLKENEQHVGYLASLCAGLEVPFMIIL-GVLSSRLHTRTLLIYGAIFGG 294
+ +F D + +G + L ++ G +++RL R L+ G I G
Sbjct: 230 AAL-WVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADG 288

Query: 295 LFYFSIGVFKNFYMMLAGQVFLAIFLAVLLGIGISYFQDILPDFPGYASTLFSNAMVIGQ 354
Y + +M F + L GIG +P S GQ
Sbjct: 289 TGYILLAFATRGWM-----AFPIMVLLASGGIG-------MPALQAMLSRQVDEERQ-GQ 335

Query: 355 LGGNL 359
L G+L
Sbjct: 336 LQGSL 340



Score = 48.7 bits (116), Expect = 2e-08
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 13/186 (6%)

Query: 213 MFKDKTLLLPFIAFILLHIGQWMYTMNMPLFVTDYLKENEQ--HVGYLASLCAGLEVPFM 270
M ++ L++ L +G + +P + D + N+ H G L +L A ++
Sbjct: 1 MKPNRPLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACA 60

Query: 271 IILGVLSSRLHTRTLLIYGAIFGGLFYFSIGVFKNFYMMLAGQVFLAIFLAVLLGIGISY 330
+LG LS R R +L+ + Y + +++ G++ I A G +Y
Sbjct: 61 PVLGALSDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAG-AY 119

Query: 331 FQDILPD-----FPGYASTLFSNAMVIGQLGGNLLGGAMSHWVGLENVFFVSAASIMLGM 385
DI G+ S F MV G + G L+GG H FF +AA L
Sbjct: 120 IADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPH-----APFFAAAALNGLNF 174

Query: 386 ILIFFT 391
+ F
Sbjct: 175 LTGCFL 180


10SaurJH9_0796SaurJH9_0820Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_07962303.069059hypothetical protein
SaurJH9_07972352.583752LysR family transcriptional regulator
SaurJH9_07980312.005802major facilitator transporter
SaurJH9_07991271.873655hypothetical protein
SaurJH9_0800-1181.255452hypothetical protein
SaurJH9_0801-1170.831547N-acetyltransferase GCN5
SaurJH9_0802-114-0.602705hypothetical protein
SaurJH9_0803-214-0.344778hypothetical protein
SaurJH9_0804112-1.114163hypothetical protein
SaurJH9_0805212-1.767391N-acetyltransferase GCN5
SaurJH9_0806313-3.278225hypothetical protein
SaurJH9_08075160.888791hypothetical protein
SaurJH9_08085140.238493hypothetical protein
SaurJH9_0809313-0.127298undecaprenyl pyrophosphate phosphatase
SaurJH9_08102130.244509ABC transporter
SaurJH9_08112130.732835ABC transporter
SaurJH9_08123130.874135hypothetical protein
SaurJH9_0813114-2.175349MarR family transcriptional regulator
SaurJH9_0814216-1.632795cobalamin synthesis protein, P47K
SaurJH9_0815118-1.796675aldo/keto reductase
SaurJH9_0816220-1.562138hypothetical protein
SaurJH9_0817119-2.272958anion transporter
SaurJH9_0818016-3.813031deoxyribodipyrimidine photo-lyase
SaurJH9_0819-116-2.472006hypothetical protein
SaurJH9_0820313-2.283204hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0803SECGEXPORT441e-09 Protein-export SecG membrane protein signature.
		>SECGEXPORT#Protein-export SecG membrane protein signature.

Length = 110

Score = 44.2 bits (104), Expect = 1e-09
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 1 MHTFLIVLLIIDCIALITVVLLQEGKSSGLSGAISGGAE-QLFGKQKQRGVDLFLNRLTI 59
M+ L+V+ +I I L+ +++LQ+GK + + + GA LFG G F+ R+T
Sbjct: 1 MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG---SSGSGNFMTRMTA 57

Query: 60 ILSILFFVLMICISYL 75
+L+ LFF++ + + +
Sbjct: 58 LLATLFFIISLVLGNI 73


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0811ALARACEMASE270.049 Alanine racemase signature.
		>ALARACEMASE#Alanine racemase signature.

Length = 356

Score = 26.7 bits (59), Expect = 0.049
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 135 MYDIYP-PYDGIPDEAFLI-KELKVNSLAGKTGTINY 169
D+ P P GI L KE+K++ +A GT+ Y
Sbjct: 305 AVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGY 341


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0812ICENUCLEATIN413e-05 Ice nucleation protein signature.
		>ICENUCLEATIN#Ice nucleation protein signature.

Length = 1258

Score = 40.5 bits (94), Expect = 3e-05
Identities = 59/290 (20%), Positives = 108/290 (37%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSA--SDSDSASDSDSASDS 609
G + + SD G S + DS +G ST +G DS+ + S + SD
Sbjct: 325 GSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDL 384

Query: 610 DSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S + +DS+ + S + +S + S + SD + S +
Sbjct: 385 TAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGD 444

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
DS + S + DS + S + SD + S S + +S + S
Sbjct: 445 DSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQ 504

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ S + S ++++SD + S S + ++S + S + +S +
Sbjct: 505 TAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGY 564

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + SD +G S ++ SDS + GS + S+ + GS
Sbjct: 565 GSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGS 614



Score = 40.5 bits (94), Expect = 3e-05
Identities = 54/266 (20%), Positives = 100/266 (37%)

Query: 575 SDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSD 634
S + GSD T+ GS + DS+ + S + DS + S + SD
Sbjct: 422 STQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLT 481

Query: 635 SASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSD 694
+ S S + +S+ + S + S + S + ++SD + S S + ++
Sbjct: 482 AGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGAN 541

Query: 695 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSESDSDSD 754
S + S + +S + S + SD + S + SDS + S
Sbjct: 542 SSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQT 601

Query: 755 SDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSD 814
+ S + S + S + S S + +DS + S +G +S ++
Sbjct: 602 ASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYG 661

Query: 815 SDSTSDTGSDNDSDSDSNSDSESGSN 840
S T+ GSD + S S + + S+
Sbjct: 662 STQTAQEGSDLTAGYGSTSTAGADSS 687



Score = 40.5 bits (94), Expect = 3e-05
Identities = 58/290 (20%), Positives = 106/290 (36%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSD--SASDSDSASDS 609
G + + SD G S + +DS +G ST +G +S + S + SD
Sbjct: 373 GSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDL 432

Query: 610 DSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S + DS+ + S + DS + S + SD + S S +
Sbjct: 433 TAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGY 492

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
+S + S + S + S + ++SD + S S + ++S + S
Sbjct: 493 ESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQ 552

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ +S + S + SD + S + SDS + S + S +
Sbjct: 553 TASYNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGY 612

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + S +G S S++ +DS + GS + +S + GS
Sbjct: 613 GSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGS 662



Score = 39.7 bits (92), Expect = 5e-05
Identities = 58/290 (20%), Positives = 106/290 (36%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSD- 610
G + + SD G S + +DS +G ST +G +S + S + SD
Sbjct: 277 GSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDL 336

Query: 611 -SASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S + DS+ + S + DS + S + SD + S + +
Sbjct: 337 TAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGA 396

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
DS + S + +S + S + SD + S + DS + S
Sbjct: 397 DSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQ 456

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ DS + S ++ SD + S S + +S + S + S +
Sbjct: 457 TAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGY 516

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + + SD +G S S++ ++S + GS + +S + GS
Sbjct: 517 GSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGS 566



Score = 39.7 bits (92), Expect = 6e-05
Identities = 59/290 (20%), Positives = 104/290 (35%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSD- 610
G + + SD G S + DS +G ST +G DS+ + S + SD
Sbjct: 229 GSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDL 288

Query: 611 -SASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S + +DS+ + S + +S + S + SD + S +
Sbjct: 289 TAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGD 348

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
DS + S + DS + S + SD + S + +DS + S
Sbjct: 349 DSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQ 408

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ +S + S ++ SD + S + DS + S + DS +
Sbjct: 409 TAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGY 468

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + SD +G S S++ +S + GS + S + GS
Sbjct: 469 GSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGS 518



Score = 39.0 bits (90), Expect = 1e-04
Identities = 51/266 (19%), Positives = 97/266 (36%)

Query: 575 SDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSD 634
S + GSD T+ GS + +DS+ + S + +S + S + SD
Sbjct: 374 STQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLT 433

Query: 635 SASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSD 694
+ S + DS+ + S + DS + S + SD + S S + +
Sbjct: 434 AGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYE 493

Query: 695 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSESDSDSD 754
S + S + S + S + ++SD + S S + ++S + S
Sbjct: 494 SSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQT 553

Query: 755 SDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSD 814
+ +S + S + SD + S + SDS + S + S ++
Sbjct: 554 ASYNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYG 613

Query: 815 SDSTSDTGSDNDSDSDSNSDSESGSN 840
S T+ S + S S + + S+
Sbjct: 614 STQTAREQSVLTTGYGSTSTAGADSS 639



Score = 38.6 bits (89), Expect = 1e-04
Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSA--SDSDSASDSDSASDS 609
G + + SD G S + DS +G ST +G DS+ + S + SD
Sbjct: 421 GSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDL 480

Query: 610 DSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S S + +S+ + S + S + S + + SD + S S + +
Sbjct: 481 TAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGA 540

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
+S + S + +S + S + SD + S + SDS + S
Sbjct: 541 NSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQ 600

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ S + S + S + S S + +DS + S + +S +
Sbjct: 601 TASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGY 660

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + SD +G S S++ +DS + GS + +S + GS
Sbjct: 661 GSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGS 710



Score = 38.2 bits (88), Expect = 2e-04
Identities = 59/290 (20%), Positives = 108/290 (37%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDS 611
G + EDS G S + S +G ST +G+DS+ + S + +S
Sbjct: 261 GSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQ 320

Query: 612 ASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDS 671
+ S + SD + S + DS+ + S + DS + S +
Sbjct: 321 TAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQK 380

Query: 672 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 731
SD + S + +DS + S + +S + S + SD + S
Sbjct: 381 GSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTG 440

Query: 732 DSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDS 791
+ DS+ + S + DS + S + SD + S S + ES +
Sbjct: 441 TAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGY 500

Query: 792 DSDSDSASDSD--SGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + S +G S ++ ++SD + GS + + ++S+ + GS
Sbjct: 501 GSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGS 550



Score = 38.2 bits (88), Expect = 2e-04
Identities = 59/278 (21%), Positives = 109/278 (39%), Gaps = 6/278 (2%)

Query: 569 SGSDSNSDSGSDS------GSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSD 622
+G DS+ +G S GSD T+ GS S + +S+ + S + S +
Sbjct: 458 AGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYG 517

Query: 623 SASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSD 682
S + + SD + S S + ++S+ + S ++ +S + S + SD
Sbjct: 518 STQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLT 577

Query: 683 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSD 742
+ S + SDS + S + S + S + S + S S + +D
Sbjct: 578 AGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGAD 637

Query: 743 SDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSD 802
S + S + +S + S ++ SD + S S + +DS + S
Sbjct: 638 SSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQT 697

Query: 803 SGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSN 840
+G +S ++ S T+ GSD S S S + + S+
Sbjct: 698 AGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSS 735



Score = 38.2 bits (88), Expect = 2e-04
Identities = 58/290 (20%), Positives = 103/290 (35%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDS 611
G E + S G S + +DS +G ST +G +S+ + S SD
Sbjct: 181 GSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEESSQMAGYGSTQTGMKGSDL 240

Query: 612 ASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDS 671
+ S + S + S + DS+ + S + SD + S + +
Sbjct: 241 TAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGA 300

Query: 672 DSD--SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
DS + S + +S + S + SD + S + DS + S
Sbjct: 301 DSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQ 360

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ DS + S ++ SD + S + +DS + S + +S +
Sbjct: 361 TAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGY 420

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + SD +G S ++ DS + GS + DS+ + GS
Sbjct: 421 GSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 470



Score = 38.2 bits (88), Expect = 2e-04
Identities = 58/290 (20%), Positives = 110/290 (37%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDS 611
G + E+S G S + S +G ST +G DS+ + S + DS
Sbjct: 405 GSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSL 464

Query: 612 ASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDS 671
+ S + SD + S S + +S+ + S + S + S + +
Sbjct: 465 TAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQN 524

Query: 672 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 731
+SD + S S + ++S + S + +S + S + SD + S
Sbjct: 525 ESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTG 584

Query: 732 DSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDS 791
+ SDS+ + S + S + S + S + S S + ++S +
Sbjct: 585 TAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGY 644

Query: 792 DSDSDSASDS--DSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + +S +G S ++ SD T+ GS + + +DS+ + GS
Sbjct: 645 GSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGS 694



Score = 37.4 bits (86), Expect = 3e-04
Identities = 57/301 (18%), Positives = 101/301 (33%), Gaps = 3/301 (0%)

Query: 542 PVVPEQPDEPGEIEP-IPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSA 600
P P+ E +P D D +SGS + + + ST S +
Sbjct: 122 PGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQTIEIATYGSTLSGTHQSQLIAGYG 181

Query: 601 SDSDSASDSD--SASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSD 658
S + S + S + +DS + S + +S + S SD
Sbjct: 182 STETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEESSQMAGYGSTQTGMKGSDLT 241

Query: 659 SASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSD 718
+ S + DS + S + DS + S + SD + S + +D
Sbjct: 242 AGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGAD 301

Query: 719 SDSDSDSDSDSDSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSD 778
S + S + +S + S ++ SD + S + DS + S
Sbjct: 302 SSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQT 361

Query: 779 SDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESG 838
+ DS + S + SD +G S ++ +DS + GS + +S + G
Sbjct: 362 AGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYG 421

Query: 839 S 839
S
Sbjct: 422 S 422



Score = 37.4 bits (86), Expect = 3e-04
Identities = 60/290 (20%), Positives = 111/290 (38%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSD- 610
G + + SD G S S + +S +G ST +G S + S + ++SD
Sbjct: 469 GSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNESDL 528

Query: 611 -SASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S S + ++S+ + S ++ +S + S + SD + S + S
Sbjct: 529 ITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGS 588

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
DS + S + S + S + S + S S + +DS + S
Sbjct: 589 DSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQ 648

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ +S + S ++ SD + S S + +DS + S + +S +
Sbjct: 649 TAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGY 708

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + SD SG S S++ +DS + GS + S+ + GS
Sbjct: 709 GSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGS 758



Score = 37.4 bits (86), Expect = 3e-04
Identities = 60/284 (21%), Positives = 109/284 (38%), Gaps = 4/284 (1%)

Query: 560 DSDSDPGSDSGSDSNSDSGSD--SGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDS 617
+S + GS + GSD +G ST +G DS+ + S + DS + S
Sbjct: 315 GEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 374

Query: 618 ASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDS 677
+ SD + S + +DS+ + S + +S + S + SD +
Sbjct: 375 TQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTA 434

Query: 678 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 737
S + DS + S + DS + S + SD + S S + +S
Sbjct: 435 GYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYES 494

Query: 738 ASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDS 797
+ + S + S + S + ++SD + S S + + S + S +
Sbjct: 495 SLIAGYGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTA 554

Query: 798 ASDS--DSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
+ +S +G S ++ SD T+ GS + SDS+ + GS
Sbjct: 555 SYNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGS 598



Score = 37.4 bits (86), Expect = 3e-04
Identities = 58/290 (20%), Positives = 110/290 (37%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDS 611
G + EDS G S + S +G ST +G+DS+ + S + +S
Sbjct: 357 GSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQ 416

Query: 612 ASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDS 671
+ S + SD + S + DS+ + S + DS + S +
Sbjct: 417 TAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQK 476

Query: 672 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 731
SD + S S + +S + S + S + S + ++SD + S S
Sbjct: 477 GSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNESDLITGYGSTS 536

Query: 732 DSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDS 791
+ ++S+ + S + +S + S + SD + S + S+S +
Sbjct: 537 TAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGY 596

Query: 792 DSDSDSASDSD--SGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S ++ S +G S ++ S T+ GS + + +DS+ + GS
Sbjct: 597 GSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGS 646



Score = 35.9 bits (82), Expect = 8e-04
Identities = 68/328 (20%), Positives = 127/328 (38%), Gaps = 4/328 (1%)

Query: 561 SDSDPGSDSGSDSNSDSGSD--SGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSA 618
DS + GS + GSD +G STS +G +S+ + S + S + S
Sbjct: 460 EDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGST 519

Query: 619 SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSD 678
+ + SD + S S + ++S+ + S ++ +S + S + SD +
Sbjct: 520 QTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAG 579

Query: 679 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSA 738
S + SDS + S + S + S + S + S S + +DS+
Sbjct: 580 YGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSS 639

Query: 739 SDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSA 798
+ S + +S + S + SD + S S + ++S + S +
Sbjct: 640 LIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAG 699

Query: 799 SDS--DSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVVPPNSPKNGTNAS 856
+S +G S ++ SD TS GS + + +DS+ + GS +S G ++
Sbjct: 700 YNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGST 759

Query: 857 NKNEAKDSKEPLPDTGSEDEANTSLIWG 884
+ + S A++SLI G
Sbjct: 760 QTAREQSVLTTGYGSTSTAGADSSLIAG 787



Score = 35.9 bits (82), Expect = 8e-04
Identities = 54/259 (20%), Positives = 95/259 (36%)

Query: 582 GSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDS 641
GSD T+ GS + DS+ + S + DS + S + SD + S
Sbjct: 237 GSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTG 296

Query: 642 ASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 701
+ +DS+ + S + +S + S + SD + S + DS +
Sbjct: 297 TAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGY 356

Query: 702 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSESDSDSDSDSDSDS 761
S + DS + S + SD + S + +DS + S + +S
Sbjct: 357 GSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQ 416

Query: 762 DSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDT 821
+ S ++ SD + S + DS + S +G DS ++ S T+
Sbjct: 417 TAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQK 476

Query: 822 GSDNDSDSDSNSDSESGSN 840
GSD + S S + S+
Sbjct: 477 GSDLTAGYGSTSTAGYESS 495



Score = 35.5 bits (81), Expect = 0.001
Identities = 59/290 (20%), Positives = 107/290 (36%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSA--SDSDSASDSDSASDS 609
G + +SD G S S + ++S +G ST + +S + S + SD
Sbjct: 517 GSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDL 576

Query: 610 DSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S + SDS+ + S ++ S + S + S + S S + +
Sbjct: 577 TAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGA 636

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
DS + S + +S + S + SD + S S + +DS + S
Sbjct: 637 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQ 696

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ +S + S ++ SD S S S + +DS + S + S +
Sbjct: 697 TAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGY 756

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + S +G S S++ +DS + GS + S + GS
Sbjct: 757 GSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGS 806



Score = 35.1 bits (80), Expect = 0.002
Identities = 61/290 (21%), Positives = 106/290 (36%), Gaps = 2/290 (0%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSA--SDSDSASDSDSASDS 609
G + E SD G S + SDS +G ST + S+ + S + S
Sbjct: 565 GSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVL 624

Query: 610 DSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDS 669
+ S S + +DS+ + S + +S + S + SD + S S + +
Sbjct: 625 TTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGA 684

Query: 670 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 729
DS + S + +S + S + SD S S S + +DS + S
Sbjct: 685 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQ 744

Query: 730 DSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDS 789
+ S + S + S + S S + +DS + S + S +
Sbjct: 745 TASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGY 804

Query: 790 DSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S + SD +G S S++ +DS + GS + +S + GS
Sbjct: 805 GSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGS 854



Score = 33.6 bits (76), Expect = 0.004
Identities = 58/283 (20%), Positives = 112/283 (39%), Gaps = 4/283 (1%)

Query: 561 SDSDPGSDSGSDSNSDSGSD--SGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSA 618
S + GS + + SD +G STS +G++S+ + S ++ +S + S
Sbjct: 508 YGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGST 567

Query: 619 SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSD 678
+ SD + S + SDS+ + S ++ S + S + S +
Sbjct: 568 QTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTG 627

Query: 679 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSA 738
S S + +DS + S + +S + S + SD + S S + +DS+
Sbjct: 628 YGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSS 687

Query: 739 SDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSA 798
+ S + +S + S + SD S S S + ++S + S ++
Sbjct: 688 LIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTAS 747

Query: 799 SDS--DSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
S +G S ++ S T+ GS + + +DS+ + GS
Sbjct: 748 YHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGS 790



Score = 32.8 bits (74), Expect = 0.008
Identities = 56/284 (19%), Positives = 101/284 (35%), Gaps = 4/284 (1%)

Query: 560 DSDSDPGSDSGSDSNSDSGSD--SGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDS 617
S + GS + S +G ST +G+DS + S + +S + S
Sbjct: 171 THQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEESSQMAGYGS 230

Query: 618 ASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDS 677
SD + S + DS+ + S + DS + S + SD +
Sbjct: 231 TQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTA 290

Query: 678 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 737
S + +DS + S + +S + S + SD + S + DS
Sbjct: 291 GYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDS 350

Query: 738 ASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDS 797
+ + S + DS + S + SD + S + ++S + S +
Sbjct: 351 SLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTA 410

Query: 798 ASDSD--SGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGS 839
+S +G S ++ SD T+ GS + DS+ + GS
Sbjct: 411 GEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGS 454



Score = 32.4 bits (73), Expect = 0.009
Identities = 60/284 (21%), Positives = 110/284 (38%), Gaps = 4/284 (1%)

Query: 561 SDSDPGSDSGSDSNSDSGSD--SGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSA 618
+S + GS + GSD +G ST +GSDS+ + S ++ S + S
Sbjct: 556 YNSVLTAGYGSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGST 615

Query: 619 SDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSD 678
+ S + S S + +DS+ + S + +S + S + SD +
Sbjct: 616 QTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAG 675

Query: 679 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSA 738
S S + +DS + S + +S + S + SD S S S + +DS+
Sbjct: 676 YGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSS 735

Query: 739 SDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSA 798
+ S + S + S + S + S S + ++S + S +
Sbjct: 736 LIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAG 795

Query: 799 SDS--DSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSN 840
S +G S ++ SD T+ GS + + +DS+ + GS
Sbjct: 796 YHSILTAGYGSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGST 839



Score = 31.6 bits (71), Expect = 0.016
Identities = 56/284 (19%), Positives = 103/284 (36%)

Query: 561 SDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASD 620
S GSDS + S + S+ +G S + S + S S + +DS+
Sbjct: 582 STGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLI 641

Query: 621 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSD 680
+ S + +S + S + SD + S S + +DS+ + S + +
Sbjct: 642 AGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGYN 701

Query: 681 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASD 740
S + S + SD S S S + +DS + S + S + S
Sbjct: 702 SILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGSTQT 761

Query: 741 SDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASD 800
+ S + S S + +DS + S + S + S + SD +
Sbjct: 762 AREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTTGYG 821

Query: 801 SDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVV 844
S S + +DSS + ST G ++ + S + N+++
Sbjct: 822 STSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLT 865



Score = 31.3 bits (70), Expect = 0.025
Identities = 58/284 (20%), Positives = 106/284 (37%)

Query: 561 SDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASD 620
S S G+DS + S +G +S +G S + SD + S S + +DS+
Sbjct: 630 STSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLI 689

Query: 621 SDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSD 680
+ S + +S + S + SD S S S + +DS+ + S +
Sbjct: 690 AGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYH 749

Query: 681 SDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASD 740
S + S + S + S S + +DS + S + S + S
Sbjct: 750 SSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQT 809

Query: 741 SDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASD 800
+ SD + S S + +DS + S + +S + S + +SD +
Sbjct: 810 AQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYG 869

Query: 801 SDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVV 844
S S + DSS + ST G ++ + S + N+++
Sbjct: 870 STSTAGYDSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLT 913



Score = 30.9 bits (69), Expect = 0.032
Identities = 59/287 (20%), Positives = 103/287 (35%)

Query: 552 GEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDS 611
G + E S G S S + +DS +G ST +G +S + S + SD
Sbjct: 613 GSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDL 672

Query: 612 ASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDS 671
+ S S + + S + S + +S + S + SD S S S + +
Sbjct: 673 TAGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGA 732

Query: 672 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 731
DS + S + S + S + S + S S + +DS + S
Sbjct: 733 DSSLIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQ 792

Query: 732 DSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDS 791
+ S + S + SD + S S + +DS + S + S +
Sbjct: 793 TAGYHSILTAGYGSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGY 852

Query: 792 DSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESG 838
S + +SD + S+S + DS+ G + + NS +G
Sbjct: 853 GSTQTAQENSDLTTGYGSTSTAGYDSSLIAGYGSTQTAGYNSILTAG 899


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0813IGASERPTASE310.016 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 30.8 bits (69), Expect = 0.016
Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 4/162 (2%)

Query: 261 ALKLKADTEAAKNDVSKRSKRSLNTQNNKST-TQEISEEQKAEYQRKSEALKERFINRQK 319
+KA+T+ + S + T K T T E E+ K E ++ E K
Sbjct: 1073 KSNVKANTQTNEVAQSGSETKETQTTETKETATVEKEEKAKVETEKTQEVPKVT-SQVSP 1131

Query: 320 SKNESVVSLIDDEDDNENDRQLVVSAPSKKPTTPTTYTETTTQVPMPTVERQTQQQIVYK 379
+ +S E END + + P + T + + + T+ V
Sbjct: 1132 KQEQSETVQPQAEPARENDPTVNIKEPQSQTNTTADTEQPAKETSSNVEQPVTESTTVNT 1191

Query: 380 TPKPLAGLNGESHDFTTTHQSPTTSNHTHNNVVEFEETSALP 421
+ N E+ TT + + + ++P
Sbjct: 1192 GNSVVE--NPENTTPATTQPTVNSESSNKPKNRHRRSVRSVP 1231


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0820PF05704270.038 Capsular polysaccharide synthesis protein
		>PF05704#Capsular polysaccharide synthesis protein

Length = 307

Score = 27.2 bits (60), Expect = 0.038
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 7/69 (10%)

Query: 116 EWVKKNYENTNHRYLVTLNLNSK-------KFTYCTKIIYQAYKFGVSEKSVKSYGLHII 168
W + Y N + +++ N + + YK + +Y HI
Sbjct: 239 YWKEIPYVNNVNPHMLQYLGNLPYDNSMFNYIKSTSPVQKLTYKLDYNNLKRNTYYDHIF 298

Query: 169 SPYAIKDNF 177
S +KDN+
Sbjct: 299 SIDKLKDNY 307


11SaurJH9_0846SaurJH9_0911Y        Y        YPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0846216-1.834288anthranilate synthase component
SaurJH9_0847318-2.897851branched-chain amino acid
SaurJH9_0848420-3.864939hypothetical protein
SaurJH9_0849723-4.472978hypothetical protein
SaurJH9_0850523-2.915173sulfatase
SaurJH9_0851622-2.009249ABC transporter
SaurJH9_0852422-0.222507ATP-dependent DNA helicase RecQ
SaurJH9_08536271.845090ABC transporter
SaurJH9_08545292.026339substrate-binding region of ABC-type glycine
SaurJH9_08555301.626790histidinol-phosphate aminotransferase
SaurJH9_08565351.180650hypothetical protein
SaurJH9_08575331.121660diacylglycerol kinase catalytic subunit
SaurJH9_08584320.872476amino acid/peptide transporter
SaurJH9_08593302.0007587-cyano-7-deazaguanine reductase
SaurJH9_08605292.685201hypothetical protein
SaurJH9_08613272.269095hypothetical protein
SaurJH9_08622251.866409hypothetical protein
SaurJH9_08632271.920385ribonucleotide reductase stimulatory protein
SaurJH9_08643282.027489ribonucleotide-diphosphate reductase subunit
SaurJH9_08652281.501838ribonucleotide-diphosphate reductase subunit
SaurJH9_08663260.618288transport system permease protein
SaurJH9_08672281.009874hypothetical protein
SaurJH9_08685312.082860transport system permease protein
SaurJH9_08695293.004660hypothetical protein
SaurJH9_08705312.843269ABC transporter
SaurJH9_08714353.447226periplasmic binding protein
SaurJH9_08723354.064909hypothetical protein
SaurJH9_08733364.690170zinc finger CHY domain-containing protein
SaurJH9_08741364.981410UDP-N-acetylenolpyruvoylglucosamine reductase
SaurJH9_08753354.584062hypothetical protein
SaurJH9_08761314.004833hypothetical protein
SaurJH9_08771251.940713hypothetical protein
SaurJH9_08781272.054849hypothetical protein
SaurJH9_08791282.024312glycerate kinase
SaurJH9_0880325-0.593732peptidase T
SaurJH9_0881425-0.054339hypothetical protein
SaurJH9_08821240.214165hypothetical protein
SaurJH9_08835220.445402diguanylate cyclase
SaurJH9_08843200.361157glycosyl transferase family protein
SaurJH9_08854200.331989hypothetical protein
SaurJH9_08863200.542079degV family protein
SaurJH9_08872190.434312helicase domain-containing protein
SaurJH9_08884180.551581hypothetical protein
SaurJH9_08894171.061245sigma 54 modulation protein/ribosomal protein
SaurJH9_08902210.965378preprotein translocase subunit SecA
SaurJH9_08911230.957137peptide chain release factor 2
SaurJH9_08920210.614108CHAP domain-containing protein
SaurJH9_0893-1220.997707hypothetical protein
SaurJH9_08940191.385845metal dependent phosphohydrolase
SaurJH9_08950191.033522hypothetical protein
SaurJH9_08962191.249331hypothetical protein
SaurJH9_08972190.620995excinuclease ABC subunit B
SaurJH9_08981181.068351excinuclease ABC subunit A
SaurJH9_08992191.200789HPr kinase/phosphorylase
SaurJH9_09002191.269516prolipoprotein diacylglyceryl transferase
SaurJH9_09012201.379599hexapaptide repeat-containing transferase
SaurJH9_09022201.313229hypothetical protein
SaurJH9_09032201.766940thioredoxin reductase
SaurJH9_09042221.999163hypothetical protein
SaurJH9_09050211.542293hypothetical protein
SaurJH9_09062201.112601hypothetical protein
SaurJH9_09072201.216000hypothetical protein
SaurJH9_09081192.485711*ATP-dependent Clp protease proteolytic subunit
SaurJH9_09091192.154412hypothetical protein
SaurJH9_09100181.525995hypothetical protein
SaurJH9_09112181.726199hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0895YERSSTKINASE260.030 Yersinia serine/threonine protein kinase signature.
		>YERSSTKINASE#Yersinia serine/threonine protein kinase signature.

Length = 732

Score = 25.9 bits (56), Expect = 0.030
Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 61 RIKESISYPVSHVLVNGIRYKIVDTRIYR 89
RI + PV + + G RY+I+D ++ R
Sbjct: 22 RISQHWQNPVGELNIGGKRYRIIDNQVLR 50


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0901GPOSANCHOR537e-09 Gram-positive coccus surface protein anchor signature.
		>GPOSANCHOR#Gram-positive coccus surface protein anchor signature.

Length = 539

Score = 52.8 bits (126), Expect = 7e-09
Identities = 39/189 (20%), Positives = 77/189 (40%), Gaps = 34/189 (17%)

Query: 8 ATIEASVAKFKRQIDSAVKSVQRFKRVADQTKDVELNANDKKLQKTIKVAKKSLDAFSNK 67
T+EA A + + K+++ + +K + A +
Sbjct: 249 KTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALEAEKADL-------E 301

Query: 68 NVKAKLDASIQDLQQKILESNFELDKLNSKEASPEVKLQKQKLT--KDIAEAEVK----- 120
+ L+A+ Q L++ L++ S+EA +++ + QKL I+EA +
Sbjct: 302 HQSQVLNANRQSLRRD-LDA--------SREAKKQLEAEHQKLEEQNKISEASRQSLRRD 352

Query: 121 --LSELEKKRISIDVNADNSKFNRVLKVSKASLEALNRS-----KAKAIIDVDNGVANSK 173
S KK+ + A++ K K+S+AS ++L R +AK ++ ANSK
Sbjct: 353 LDASREAKKQ----LEAEHQKLEEQNKISEASRQSLRRDLDASREAKKQVEKALEEANSK 408

Query: 174 IKRTKEELK 182
+ ++ K
Sbjct: 409 LAALEKLNK 417



Score = 43.5 bits (102), Expect = 5e-06
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 7 KATIEASVAKFKRQIDS---AVKSVQRFKRVADQTKDVELNANDKKLQK---TIKVAKKS 60
+ A+ +R +D+ A K ++ + ++ + A+ + L++ + AKK
Sbjct: 304 SQVLNANRQSLRRDLDASREAKKQLEAEHQKLEEQNKI-SEASRQSLRRDLDASREAKKQ 362

Query: 61 LDAFSNKNVKAK--LDASIQDLQQKILESNFELDKLNSKEASPEVKLQK-QKLTKDIAEA 117
L+A K + +AS Q L++ + S ++ KL +KL K++ E
Sbjct: 363 LEAEHQKLEEQNKISEASRQSLRRDLDASREAKKQVEKALEEANSKLAALEKLNKEL-EE 421

Query: 118 EVKLSELEK 126
KL+E EK
Sbjct: 422 SKKLTEKEK 430



Score = 33.5 bits (76), Expect = 0.006
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 15/122 (12%)

Query: 7 KATIEASVAKFK--RQI-DSAVKSVQRF---KRVADQTKDVELNANDKKLQKTIKV---- 56
K +EA K + +I +++ +S++R R A + + L + KL K+
Sbjct: 360 KKQLEAEHQKLEEQNKISEASRQSLRRDLDASREAKKQVEKALEEANSKLAALEKLNKEL 419

Query: 57 -AKKSLDAFSNKNVKAKLDASIQDLQQKILESNFELDKLNSKEAS----PEVKLQKQKLT 111
K L ++AKL+A + L++K+ + EL KL + +AS P+ K + +
Sbjct: 420 EESKKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAGKASDSQTPDAKPGNKAVP 479

Query: 112 KD 113

Sbjct: 480 GK 481


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0910OMADHESIN290.040 Yersinia outer membrane adhesin signature.
		>OMADHESIN#Yersinia outer membrane adhesin signature.

Length = 455

Score = 29.1 bits (64), Expect = 0.040
Identities = 36/137 (26%), Positives = 60/137 (43%), Gaps = 25/137 (18%)

Query: 225 KDTD------IKAEPE-LLDKINIANVEGLENKLQEVEKIKDTTLNDSKTYTDSKIAELV 277
KDTD +K E E + N + E L N + + L + YTDSK AE +
Sbjct: 204 KDTDAVNVAQLKKEIEKTQENTNKRSAELLANANAYADNKSSSVLGIANNYTDSKSAETL 263

Query: 278 DSAPESM----NTLRELAEAIQNNSISESVLQQIG--------SKVSTEDFEGFKQSLNS 325
++A + + +A+A +NS++ + L+ + + T + K+S +
Sbjct: 264 ENARKEAFAQSKDVLNMAKA-HSNSVARTTLETAEEHANSVARTTLETAEEHANKKSAEA 322

Query: 326 L-----YADKNHSHTIK 337
L YAD SHT+K
Sbjct: 323 LASANVYADSKSSHTLK 339


12SaurJH9_0973SaurJH9_0979Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0973111-4.088464hypothetical protein
SaurJH9_0974113-4.280137hypothetical protein
SaurJH9_0975317-6.512424hypothetical protein
SaurJH9_0976419-6.302540hypothetical protein
SaurJH9_0977319-4.175272XRE family transcriptional regulator
SaurJH9_0978214-0.860396hypothetical protein
SaurJH9_09792141.217059prophage antirepressor
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0974IGASERPTASE367e-04 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 36.2 bits (83), Expect = 7e-04
Identities = 17/143 (11%), Positives = 48/143 (33%), Gaps = 14/143 (9%)

Query: 420 QLEIEESALKNESDNASKQRLQELQEELANEKEKQAALQSRVESEKEKIANLQEKRAQLD 479
E+ +S + + Q + + ++EK + + + + + K+ Q +
Sbjct: 1082 TNEVAQSGSETKE----TQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVSPKQEQSE 1137

Query: 480 ESRQALEDAQTNNNLEKAAELQYGTIPQLEKELRELEDNFQDEQGEDTDRMIREVVTDEE 539
+ E A+ N+ E Q + + ++ ++T + + VT+
Sbjct: 1138 TVQPQAEPARENDPTVNIKEPQ-------SQTNTTAD---TEQPAKETSSNVEQPVTEST 1187

Query: 540 IGDIVSQWTGIPVSKLVETEREK 562
+ + P + T +
Sbjct: 1188 TVNTGNSVVENPENTTPATTQPT 1210


13SaurJH9_1018SaurJH9_1074Y        Y        YPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1018214-1.192402hypothetical protein
SaurJH9_1019317-1.633521hypothetical protein
SaurJH9_1020321-2.640435hypothetical protein
SaurJH9_1021322-1.865225hypothetical protein
SaurJH9_10222210.534250HK97 family phage protein
SaurJH9_10232210.297145hypothetical protein
SaurJH9_1024220-0.298093TP901-1 family phage major tail protein
SaurJH9_1025222-0.195529hypothetical protein
SaurJH9_1026121-1.047718hypothetical protein
SaurJH9_1027220-0.752638phage-like protein
SaurJH9_1028225-2.411249hypothetical protein
SaurJH9_1029026-1.510214phage minor structural protein
SaurJH9_1030025-0.989917hypothetical protein
SaurJH9_1031222-2.127001hypothetical protein
SaurJH9_1032217-0.177900hypothetical protein
SaurJH9_1033315-0.051440hypothetical protein
SaurJH9_10344160.826246hypothetical protein
SaurJH9_10354160.491381mannosyl-glycoprotein
SaurJH9_10365170.564348hypothetical protein
SaurJH9_10373181.158861hypothetical protein
SaurJH9_10383191.254875SPP1 family holin
SaurJH9_10393211.115118CHAP domain-containing protein
SaurJH9_1040624-0.790461hypothetical protein
SaurJH9_10416270.194077hypothetical protein
SaurJH9_10422270.758584hypothetical protein
SaurJH9_1043325-0.213490hypothetical protein
SaurJH9_1044425-0.298093hypothetical protein
SaurJH9_1045524-0.337965hypothetical protein
SaurJH9_10467290.637945hypothetical protein
SaurJH9_1047623-0.581058hypothetical protein
SaurJH9_10482160.3826942-nitropropane dioxygenase
SaurJH9_10491150.427714hypothetical protein
SaurJH9_1050316-0.031262hypothetical protein
SaurJH9_10514180.026912metallophosphoesterase
SaurJH9_1052318-0.317758lipoyl synthase
SaurJH9_1053319-0.414439hypothetical protein
SaurJH9_1054523-1.275143transposase, IS204/IS1001/IS1096/IS1165 family
SaurJH9_1055320-1.101981hypothetical protein
SaurJH9_1056315-1.410603hypothetical protein
SaurJH9_1057411-1.336344HAD family hydrolase
SaurJH9_1058311-1.086505D-isomer specific 2-hydroxyacid dehydrogenase
SaurJH9_1059311-1.155600hypothetical protein
SaurJH9_1060412-1.634289hypothetical protein
SaurJH9_1061514-2.538236D-alanine--poly(phosphoribitol) ligase subunit
SaurJH9_1062415-1.448590membrane bound O-acyl transferase, MBOAT family
SaurJH9_1063616-0.936051D-alanine--poly(phosphoribitol) ligase subunit
SaurJH9_1064716-1.112046D-alanyl-lipoteichoic acid biosynthesis protein
SaurJH9_10656141.820752hypothetical protein
SaurJH9_10665141.494264NifU domain-containing protein
SaurJH9_10675141.004224hypothetical protein
SaurJH9_10685150.886497FAD-dependent pyridine nucleotide-disulfide
SaurJH9_10695140.929176hypothetical protein
SaurJH9_10704140.939793iron-sulfur cluster assembly accessory protein
SaurJH9_1071216-0.854679FAD-dependent pyridine nucleotide-disulfide
SaurJH9_1072316-0.676881leucyl aminopeptidase
SaurJH9_10734170.276620Na+/H+ antiporter NhaC
SaurJH9_10743150.665298hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1018TCRTETOQM2282e-69 Tetracycline resistance protein TetO/TetQ/TetM family ...
		>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family

signature.
Length = 639

Score = 228 bits (582), Expect = 2e-69
Identities = 120/451 (26%), Positives = 210/451 (46%), Gaps = 48/451 (10%)

Query: 15 IISHPDAGKTTLTEKLLYFSGAIREAGTVKGKKTGKFATSDWMKVEQERGISVTSSVMQF 74
+++H DAGKTTLTE LLY SGAI E G+V T +D +E++RGI++ + + F
Sbjct: 8 VLAHVDAGKTTLTESLLYNSGAITELGSVDKGTT----RTDNTLLERQRGITIQTGITSF 63

Query: 75 DYDDYKINILDTPGHEDFSEDTYRTLMAVDSAVMVIDCAKGIEPQTLKLFKVCKMRGIPI 134
+++ K+NI+DTPGH DF + YR+L +D A+++I G++ QT LF + GIP
Sbjct: 64 QWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMGIPT 123

Query: 135 FTFINKLDRVGKEPFELLDEIEETLNIETYPMNWPIGMGQSFFGIIDRKSKTIEPFRDEE 194
FINK+D+ G + + +I+E L+ E +I +K +
Sbjct: 124 IFFINKIDQNGIDLSTVYQDIKEKLSAEI---------------VIKQKVE------LYP 162

Query: 195 NILHLNDDFELEEDHAITNDSAF-EQAIEELMLVEEAGEAFDNDALLSGDLTPVFFGSAL 253
N+ N + D I + E+ + L E ++ + L PV+ GSA
Sbjct: 163 NMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFHNCSLFPVYHGSAK 222

Query: 254 ANFGVQNFLNAYVDFAPMPNARQTKEDVEVSPFDDSFSGFIFKIQANMDPKHRDRIAFMR 313
N G+ N + + R E G +FKI+ K R R+A++R
Sbjct: 223 NNIGIDNLIEVITNKFYSSTHRGQSE----------LCGKVFKIE--YSEK-RQRLAYIR 269

Query: 314 VVSGAFERGMDVTLQRTNKKQKITRSTSFMADDKETVNHAVAGDIIGLYDTG---NYQIG 370
+ SG V + K KIT + + + ++ A +G+I+ L + N +G
Sbjct: 270 LYSGVLHLRDSVRISEKEKI-KITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLG 328

Query: 371 DTLVGGKQTYSFQDLPQFTPEIFMKVSAKNVMKQKHFHKGIEQLVQEG-AIQYYKTLHTN 429
DT + ++ LP + V +++ + ++ ++YY T+
Sbjct: 329 DTKLLPQRERIENPLPL----LQTTVEPSKPQQREMLLDALLEISDSDPLLRYYVDSATH 384

Query: 430 QIILGAVGQLQFEVFEHRMKNEYNVDVVMEP 460
+IIL +G++Q EV ++ +Y+V++ ++
Sbjct: 385 EIILSFLGKVQMEVTCALLQEKYHVEIEIKE 415


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1046FbpA_PF05833290.004 Fibronectin-binding protein
		>FbpA_PF05833#Fibronectin-binding protein

Length = 577

Score = 29.1 bits (65), Expect = 0.004
Identities = 9/53 (16%), Positives = 22/53 (41%), Gaps = 4/53 (7%)

Query: 16 NLNNLLDKLHKALKERDEYKKQRDELIEDIAKLRERN----EELENMWRTVKN 64
+ + LL+ + A + D K + +L + + R + L N + ++
Sbjct: 279 SSSKLLENFYYAKDKSDRLKSKSSDLQKIVMNNINRCTKKDKILNNTLKKCED 331


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1053PF05272405e-130 Virulence-associated E family protein
		>PF05272#Virulence-associated E family protein

Length = 892

Score = 405 bits (1041), Expect = e-130
Identities = 135/433 (31%), Positives = 191/433 (44%), Gaps = 38/433 (8%)

Query: 358 DAMQDFDEIVNSDDAWSETLEITSKGTFKASIPNIEIILRNDPNLKGKIAFNEFTKQIEC 417
D F E D L + + K + LR+ P L G +AF+E +Q
Sbjct: 424 DGEDPFGE---WLDDEVARLRLRGRWLLKPRRAALIEALRSAPALAGCVAFDELREQPVA 480

Query: 418 LGKVPWNTNFKTRQWQDGDDSSLRSYIEKIYD-IHHSGKT-KDAIISVAMQNAYHPVRDY 475
+ PW +D D L Y+E Y S +T + AI A N HP RD+
Sbjct: 481 VRAFPWRKA--PGPLEDADVLRLADYVETTYGTGEASAQTTEQAINVAADMNRVHPFRDW 538

Query: 476 LNKISWDGHKRLEKLFIKYLGVEDTEVN-------RTTTKKALTAGIARVMEPGCKFDYM 528
+ WD RLEK + LG + + K L +ARVMEPGCKFDY
Sbjct: 539 VKAQQWDEVPRLEKWLVHVLGKTPDDYKPRRLRYLQLVGKYILMGHVARVMEPGCKFDYS 598

Query: 529 LTLYGPQGVGKSALLKKLGGA-WFSDSLVSV-TGKEAYEALQGVWLMEMAELAATRKAEV 586
+ L G G+GKS L+ L G +FSD+ + TGK++YE + G+ E++E+ A R+A+
Sbjct: 599 VVLEGTGGIGKSTLINTLVGLDFFSDTHFDIGTGKDSYEQIAGIVAYELSEMTAFRRADA 658

Query: 587 EAIKHFISKQVDRFRVAYGHYIEDFPRQCIFIGTTNKVDFLRDETGGRRFWPMTVNPERV 646
EA+K F S + DR+R AYG Y++D PRQ + TTNK +L D TG RRFWP+ V P R
Sbjct: 659 EAVKAFFSSRKDRYRGAYGRYVQDHPRQVVIWCTTNKRQYLFDITGNRRFWPVLV-PGRA 717

Query: 647 EVNWSKLTKDEIDQIWAEAKYYYEQGEELFLNPELEEAMRSIQSKHTEESPYTGIIDEYL 706
+ W + + Q++AEA + Y GE F +PE EE + +E
Sbjct: 718 NLVWLQKFR---GQLFAEALHLYLAGERYFPSPEDEEIYFRPE----QELRLVE------ 764

Query: 707 NTPIPSNWDDLTIFERRRFYQGDVDMLPTGNVDYVERNKVCALEVFVECFGKDKGDSRGS 766
L R G Y + V+ G D G S
Sbjct: 765 ----TGVQGRLWALLTREGAPAAEGAAQKG---YSVNTTFVTIADLVQALGADPGKS-SP 816

Query: 767 MEIRKISNILRQL 779
M ++ + L +
Sbjct: 817 MLEGQVRDWLNEN 829


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1060STREPKINASE348e-04 Streptococcus streptokinase protein signature.
		>STREPKINASE#Streptococcus streptokinase protein signature.

Length = 440

Score = 34.3 bits (78), Expect = 8e-04
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 3/121 (2%)

Query: 69 PLKMYEDYKVVNTEVSDLLTVSPNNSLSSFDFINQIETIRNEKGNAYVLIERD---IYHQ 125
PL +D++ + L T++ ++++S + + Q ++I N+ Y + ERD + H
Sbjct: 194 PLNPDDDFRPGLKDTKLLKTLAIGDTITSQELLAQAQSILNKNHPGYTIYERDSSIVTHD 253

Query: 126 PSKLFLLNPDVVEMLIENQSRELYYSIHAATGNKLIVHNMDMLHFKHIVASNMVQGISPI 185
+ P E ++RE Y I+ +G ++N D++ K+ V + P
Sbjct: 254 NDIFRTILPMDQEFTYRVKNREQAYRINKKSGLNEEINNTDLISEKYYVLKKGEKPYDPF 313

Query: 186 D 186
D
Sbjct: 314 D 314


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1068INTIMIN310.002 Intimin signature.
		>INTIMIN#Intimin signature.

Length = 939

Score = 30.8 bits (69), Expect = 0.002
Identities = 26/155 (16%), Positives = 55/155 (35%), Gaps = 23/155 (14%)

Query: 1 MTKTLKVYKGDDVVASEQGEGKVSVTLSNLEADTTYPKGTYQVAWEENGKESSKV----- 55
+T T+KV KGD V++++ ++ + + T G +V S V
Sbjct: 678 ITYTVKVMKGDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVS 737

Query: 56 --------------DVPQFKTNPILVSGVSFTPETKSIMVNTDDNVEPNIAPSTATNKIL 101
I + G + ++ + ++ N
Sbjct: 738 DVAVDVKAPEVEFFTTLTIDDGNIEIVGTGVKGKLPTVWLQYG----QVNLKASGGNGKY 793

Query: 102 KYTSEHPEFVTVDENTGAIHGVAEGTSVITAMSTD 136
+ S +P +VD ++G + +GT+ I+ +S+D
Sbjct: 794 TWRSANPAIASVDASSGQVTLKEKGTTTISVISSD 828


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1070GPOSANCHOR605e-11 Gram-positive coccus surface protein anchor signature.
		>GPOSANCHOR#Gram-positive coccus surface protein anchor signature.

Length = 539

Score = 60.5 bits (146), Expect = 5e-11
Identities = 37/235 (15%), Positives = 76/235 (32%), Gaps = 11/235 (4%)

Query: 72 YSQVEDELKQVNANYQKAKSSVKDVEKAYLKLVEANKKEKLALDKSKEALKSSNTELKKA 131
+ + LK N++ ++KD + + K++ DKS S EL+
Sbjct: 62 FEIENNTLKLKNSDLSFNNKALKDHNDELTEELSNAKEKLRKNDKSLSEKASKIQELEAR 121

Query: 132 ENQYKRTNQRKQDAYQ----KLKQLRDAEQKLKNSNQATTAQLKRASDAVQKQSAKHKAL 187
+ ++ + + K+K L + L L+ A + SAK K L
Sbjct: 122 KADLEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLEKALEGAMNFSTADSAKIKTL 181

Query: 188 VEQYKQEGNQVQKLKVQNDNLSKSNDKIESSYAKTNTKLKQTEKEFNDLNNTIKNHSANV 247
+ L+ + L K+ + + + K+K E E L + +
Sbjct: 182 EAEK-------AALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLEKAL 234

Query: 248 AKAETAVNKEKAALNNLERSIDKASSEMKTFNKEQMIAQSHFGKLASQADVMSKK 302
A + A + LE + K A + +++ + +
Sbjct: 235 EGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAE 289



Score = 58.2 bits (140), Expect = 3e-10
Identities = 33/239 (13%), Positives = 70/239 (29%), Gaps = 3/239 (1%)

Query: 28 RQLGVVNSEMKANLSAFDKSEKSMEKYQARIKGLNDRLKVQKKMYSQVEDELKQVNANYQ 87
L + NS++ N A + + + K + + EL+ A+ +
Sbjct: 67 NTLKLKNSDLSFNNKALKDHNDELTEELSNAKEKLRKNDKSLSEKASKIQELEARKADLE 126

Query: 88 KAKSSVKDVEKAYLKLVEANKKEKLALDKSKEALKSSNTELKKAENQYKRTNQRKQDAYQ 147
KA + K + L+ A N + + +
Sbjct: 127 KAL---EGAMNFSTADSAKIKTLEAEKAALAARKADLEKALEGAMNFSTADSAKIKTLEA 183

Query: 148 KLKQLRDAEQKLKNSNQATTAQLKRASDAVQKQSAKHKALVEQYKQEGNQVQKLKVQNDN 207
+ L + +L+ + + S ++ A+ AL + ++ +
Sbjct: 184 EKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLEKALEGAMNFSTA 243

Query: 208 LSKSNDKIESSYAKTNTKLKQTEKEFNDLNNTIKNHSANVAKAETAVNKEKAALNNLER 266
S +E+ A + + EK N SA + E +A +LE
Sbjct: 244 DSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALEAEKADLEH 302



Score = 57.0 bits (137), Expect = 6e-10
Identities = 45/240 (18%), Positives = 90/240 (37%), Gaps = 14/240 (5%)

Query: 11 ELKLDHLGVQEGMKGLKRQLGVVNSEMKANLSAFDKSEKSMEKYQARIKGLNDRLKVQKK 70
L+ + ++ L++ L + A+ + E AR L L+
Sbjct: 180 TLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLEKALEGAMN 239

Query: 71 MYSQVEDELKQVNANYQKAKSSVKDVEKAYLKLVEANKKEKLALDKSKEALKSSNTELKK 130
+ ++K + A ++ ++EKA + + + + + + E
Sbjct: 240 FSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALEAEKAD 299

Query: 131 AENQ-------YKRTNQRKQDAYQKLKQLRDAEQKLKNSNQATTAQLKR------ASDAV 177
E+Q + + + + KQL QKL+ N+ + A + AS
Sbjct: 300 LEHQSQVLNANRQSLRRDLDASREAKKQLEAEHQKLEEQNKISEASRQSLRRDLDASREA 359

Query: 178 QKQS-AKHKALVEQYKQEGNQVQKLKVQNDNLSKSNDKIESSYAKTNTKLKQTEKEFNDL 236
+KQ A+H+ L EQ K Q L+ D ++ ++E + + N+KL EK +L
Sbjct: 360 KKQLEAEHQKLEEQNKISEASRQSLRRDLDASREAKKQVEKALEEANSKLAALEKLNKEL 419



Score = 51.2 bits (122), Expect = 4e-08
Identities = 41/261 (15%), Positives = 87/261 (33%), Gaps = 10/261 (3%)

Query: 21 EGMKGLKRQLGVVNSEMKANLSAFDKSEKSMEKYQARIKGLNDRLKVQKKMYSQVEDELK 80
EG ++A +A + + +EK + + K + L
Sbjct: 165 EGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALA 224

Query: 81 QVNANYQKAKSSVKDVEKAYLKLVEANKKEKLALDKSKEALKSSNTELKKAENQYKRTNQ 140
A+ +KA + A ++ + EK AL+ + L+ + +
Sbjct: 225 ARKADLEKALEGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIK 284

Query: 141 RKQDAYQKLKQLRDAEQKLKNSNQATTAQLKRASDAVQKQSAKHKALVEQYKQEGNQVQK 200
+ L+ + L++ +Q A + + K L ++ QK
Sbjct: 285 TLEAEKAALEAE---KADLEHQSQVLNANRQSLRRDLDASREAKKQLEAEH-------QK 334

Query: 201 LKVQNDNLSKSNDKIESSYAKTNTKLKQTEKEFNDLNNTIKNHSANVAKAETAVNKEKAA 260
L+ QN S + + KQ E E L K A+ ++ + A
Sbjct: 335 LEEQNKISEASRQSLRRDLDASREAKKQLEAEHQKLEEQNKISEASRQSLRRDLDASREA 394

Query: 261 LNNLERSIDKASSEMKTFNKE 281
+E+++++A+S++ K
Sbjct: 395 KKQVEKALEEANSKLAALEKL 415



Score = 35.4 bits (81), Expect = 0.003
Identities = 40/262 (15%), Positives = 92/262 (35%), Gaps = 14/262 (5%)

Query: 905 KGVSKETEKALEKYVHYSEENSRIMEKVRLNSGQISEDKAKKLLKIETDL-----SNNLI 959
K LE E +EK + S + K+ +E + +
Sbjct: 171 STADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALAARKADL 230

Query: 960 AEIEKRNKKELEKTQELIDKYSAF--DEQEKQNILTRTKEKNDLRIKKEQELNQKIKELK 1017
+ + I A + +Q L + E + + ++ K
Sbjct: 231 EKALEGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEK 290

Query: 1018 EKSLSDGQISENERKEIEK-LENQRRDITVKELSKTEKEQERILVRMQRNRNAYSIDEAS 1076
++ E++ + + ++ RRD+ +K + E E + Q + S
Sbjct: 291 AALEAEKADLEHQSQVLNANRQSLRRDLDASREAKKQLEAEHQKLEEQNKISEASRQSLR 350

Query: 1077 KAIKEAEKARKARKKEVDKQYEDDVIAIKNNVNLSKSEKDKLLAIADQRHKDEVRKAKSK 1136
+ + + +A+K + E K E + I+ + +L + A K +V KA +
Sbjct: 351 RDLDASREAKKQLEAEHQKLEEQNKISEASRQSLRRDLDASREA------KKQVEKALEE 404

Query: 1137 KDAVVDVVKKQNKDIDKEMDLS 1158
++ + ++K NK++++ L+
Sbjct: 405 ANSKLAALEKLNKELEESKKLT 426


14SaurJH9_1084SaurJH9_1095Y        NNGenomic Island
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1084-219-3.939234monovalent cation/H+ antiporter subunit A
SaurJH9_1085-114-5.373234hypothetical protein
SaurJH9_1086014-5.465120peptidyl-prolyl isomerase
SaurJH9_1087016-6.063292RNA-binding S1 domain-containing protein
SaurJH9_1088115-6.277736NADH:flavin oxidoreductase
SaurJH9_1089116-6.243259ornithine--oxo-acid transaminase
SaurJH9_1091015-5.790823Glu/Leu/Phe/Val dehydrogenase
SaurJH9_1092018-2.955900glycerophosphodiester phosphodiesterase
SaurJH9_1093117-3.255082hypothetical protein
SaurJH9_1094115-2.207401argininosuccinate lyase
SaurJH9_1095416-0.709225argininosuccinate synthase
15SaurJH9_1184SaurJH9_1190Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1184516-0.747026hypothetical protein
SaurJH9_1185516-0.676676phage conserved Open Reading Frame 51
SaurJH9_1186515-1.392185hypothetical protein
SaurJH9_1187514-1.762348hypothetical protein
SaurJH9_1188413-1.767790hypothetical protein
SaurJH9_1189114-2.780954hypothetical protein
SaurJH9_1190-114-3.361503dUTPase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1184LPSBIOSNTHSS2191e-76 Lipopolysaccharide core biosynthesis protein signat...
		>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein

signature.
Length = 166

Score = 219 bits (560), Expect = 1e-76
Identities = 77/155 (49%), Positives = 112/155 (72%)

Query: 5 IAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKNSKKEGTFSLEERMDLIEQSVKHLP 64
A+ PGSFDPIT+GHLDIIER FD+++V VL+N K+ FS++ER++ I +++ HLP
Sbjct: 2 NAIYPGSFDPITFGHLDIIERGCRLFDQVYVAVLRNPNKQPMFSVQERLEQIAKAIAHLP 61

Query: 65 NVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTSMNKKLNNEIETLYMMSSTN 124
N +V F GL V+Y Q A I+RGLR +SDFE EL++ + NK L +++ET+++ +ST
Sbjct: 62 NAQVDSFEGLTVNYARQRQAGAILRGLRVLSDFELELQMANTNKTLASDLETVFLTTSTE 121

Query: 125 YSFISSSIVKEVAAYRADISEFVPPYVEKALKKKF 159
YSF+SSS+VKEVA + ++ FVP +V AL +F
Sbjct: 122 YSFLSSSLVKEVARFGGNVEHFVPSHVAAALYDQF 156


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1188IGASERPTASE366e-04 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 35.8 bits (82), Expect = 6e-04
Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 15/194 (7%)

Query: 447 RIVDKEAFTKANTDKSNKKEQQDNSAKKEA---------TPATPSKPTPSPVEKESQKQD 497
+ VD T N +++ N+ + PATPS+ T + E Q+
Sbjct: 990 QTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPPAPATPSETTETVAENSKQESK 1049

Query: 498 SQKDDNKQLPSVEKENDASSESGKDKTPATKPT------KGEVESSSTTPTKVVSTTQNV 551
+ + + + +N ++ K A T E + + TT TK +T +
Sbjct: 1050 TVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKETQTTETKETATVEKE 1109

Query: 552 AKPTTASSKTTKDVVQTSAGSSEAKDSAPLQKANIKNTNDGHTQSQNNKNTQENKAKSLP 611
K + KT + TS S + + S +Q + T + +Q N
Sbjct: 1110 EKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPARENDPTVNIKEPQSQTNTTADTE 1169

Query: 612 QTGEESNKDMTLPL 625
Q +E++ ++ P+
Sbjct: 1170 QPAKETSSNVEQPV 1183



Score = 30.0 bits (67), Expect = 0.035
Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 5/156 (3%)

Query: 37 EAQAAAEETGGTNTEAQPKTEAVASPTTTSEKAPET-KPVANAVSVSNKEVEAPTSETKE 95
A EE TE + V S + ++ ET +P A ++ V +++
Sbjct: 1103 TATVEKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPARENDPTVNIKEPQSQT 1162

Query: 96 AKEVKEVKAPKETKAVKPAAKATNNTYPILNQELREAIKNPAIKDKDHSAPNSRPIDFEM 155
+ KET + + T N + NP + P
Sbjct: 1163 NTTADTEQPAKETSSNVEQPVTESTTVNTGNSVVE----NPENTTPATTQPTVNSESSNK 1218

Query: 156 KKENGEQQFYHYASSVKPARVIFTDSKPEIELGLQS 191
K + +V+PA D L S
Sbjct: 1219 PKNRHRRSVRSVPHNVEPATTSSNDRSTVALCDLTS 1254


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1189IGASERPTASE340.001 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 33.9 bits (77), Expect = 0.001
Identities = 27/132 (20%), Positives = 44/132 (33%), Gaps = 4/132 (3%)

Query: 184 ADAAKPNNVKPVQPKPAQPKTPTEQTKPVQPKVEKVKPTVTTTSKVEDNHSTKVVSTDTT 243
+ A+ + P PA P TE + K + + +V +
Sbjct: 1015 EEIARVDEAPVPPPAPATPSETTETVAENSKQESKTVEKNEQDATETTAQNREVAKEAKS 1074

Query: 244 KDQTKTQTAHTVKTAQTAQEQNKVQTPVKDVATAKSESNNQAVSDNKSQQTNKVTKHNET 303
+ TQT + AQ+ E + QT + V K+Q+ KVT +
Sbjct: 1075 NVKANTQTN---EVAQSGSETKETQTTETKETATVEKEEKAKVETEKTQEVPKVTS-QVS 1130

Query: 304 PKQASKAKELPK 315
PKQ P+
Sbjct: 1131 PKQEQSETVQPQ 1142


16SaurJH9_1206SaurJH9_1229Y        Y        YPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_12062121.842941phage protein DNA packaging protein
SaurJH9_12071121.845062hypothetical protein
SaurJH9_1208014-0.181847hypothetical protein
SaurJH9_1209-214-1.766803hypothetical protein
SaurJH9_1210-113-3.090599phi13 family phage major tail protein
SaurJH9_1211114-3.847475Ig domain-containing protein
SaurJH9_1212116-2.228595hypothetical protein
SaurJH9_1213119-2.172807TP901 family phage tail tape measure protein
SaurJH9_1214021-2.743202hypothetical protein
SaurJH9_1215-222-1.626804hypothetical protein
SaurJH9_1216017-2.099894hypothetical protein
SaurJH9_1217217-0.993855hypothetical protein
SaurJH9_1218218-2.543842hypothetical protein
SaurJH9_1219117-2.436251hypothetical protein
SaurJH9_1220115-2.512292hypothetical protein
SaurJH9_1221215-2.514576hypothetical protein
SaurJH9_1222013-1.845794phage phi LC3 family holin
SaurJH9_1223013-1.993795N-acetylmuramoyl-L-alanine amidase
SaurJH9_1224111-0.704166peptidase S1 and S6, chymotrypsin/Hap
SaurJH9_1225110-0.587948H(+)-transporting two-sector ATPase
SaurJH9_1226011-0.2980935'-nucleotidase domain-containing protein
SaurJH9_12271120.138861**ComK family protein
SaurJH9_12282140.361973hypothetical protein
SaurJH9_1229216-0.244024lipoyltransferase and lipoate-protein ligase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1207MICOLLPTASE300.027 Microbial collagenase metalloprotease (M9) signature.
		>MICOLLPTASE#Microbial collagenase metalloprotease (M9) signature.

Length = 1104

Score = 30.5 bits (68), Expect = 0.027
Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 378 DFSQHGGNRLGANSLLSAIYGGTVAGPNAIDYISNIDRSYTDMDESIFEKRKAEEQERFD 437
+ ++G N N++ + + G + I D T+ F R ER +
Sbjct: 246 NIDKYGSNYSKGNAVFNLMKGIDYYTNSVIYNTKGYDAKNTE-----FYNRIDPYMERLE 300

Query: 438 KLLAMR---GTENAYKLHRELGEIMTANVTVVRENEKLLETDKKIVELMKRYEDIDMEDT 494
L + +NA+ ++ L T + RE+ + + + + MK Y + +
Sbjct: 301 SLCTIGDKLNNDNAWLVNNALYY--TGRMGKFREDPSISQ--RALERAMKEYPYLSYQYI 356

Query: 495 QTWSNQA 501
+ +N
Sbjct: 357 E-AANDL 362


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1222BICOMPNTOXIN313e-109 Staphylococcal bi-component toxin signature.
		>BICOMPNTOXIN#Staphylococcal bi-component toxin signature.

Length = 315

Score = 313 bits (803), Expect = e-109
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 24/318 (7%)

Query: 9 VTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKEN--GMHKKVFY 66
+TTTL + L+ P+AN + T DIG + ++ N G+ + + +
Sbjct: 7 LTTTLSVS--LLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQNIQF 64

Query: 67 SFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKS-GLAWPSAFKVQLQLPDNEVAQIS 125
F+ DK +NK L+++ +G I+ + Y+ + N + WP + + L+ D V+ I
Sbjct: 65 DFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTNDKYVSLI- 123

Query: 126 DYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQPDFKTILES 185
+Y P+N I++ TL Y GN + +GG N S ++ Y Q ++ + +E
Sbjct: 124 NYLPKNKIESTNVSQTLGYNIGGNFQSAPS--LGGNGSFNYS--KSISYTQQNYVSEVEQ 179

Query: 186 PTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAAENFLDPNKASSL 245
K V W V N+ ++ + + LF+ + S + F+ ++ L
Sbjct: 180 QNSKSVLWGVKANSFATESG-------QKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPL 232

Query: 246 LSSGFSPDFATVITMDRKASKQQTNIDVIYERVRD-----DYQLHWTSTNWKGTNTKDKW 300
+ SGF+P F ++ + K S + ++ Y R D H+ ++ G + +
Sbjct: 233 VQSGFNPSFIATVSHE-KGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAF 291

Query: 301 TDRS-SERYKIDWEKEEM 317
+R+ + +Y+++W+ E+
Sbjct: 292 VNRNYTVKYEVNWKTHEI 309


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1224TOXICSSTOXIN502e-09 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 49.7 bits (118), Expect = 2e-09
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 12/223 (5%)

Query: 1 MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF 60
M+K + N + + LLL T P+ S A + D NI +L+ +Y+
Sbjct: 1 MNKKLLMNFFIVSPLLLATTATDFTPVPLSSNQIIKTAKASTND--NIKDLLDWYSSGSD 58

Query: 61 SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKD-KDTDQ 119
+F+N DN + +K S + ++ + + + K VD+ + K
Sbjct: 59 TFTN--SEVLDNSLGSMRIKNTDGSISLIIFPSP-YYSPAFTKGEKVDLNTKRTKKSQHT 115

Query: 120 LWWSYRETFTGGVTPAAK-PSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFR 178
+Y GVT K P+ L V+ K + K +K L + +DF
Sbjct: 116 SEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGPKF---DKKQLAISTLDFE 172

Query: 179 AREALIKNKILY-TENRNKGKLKIT-GGGNNYTIDLSKRLHSD 219
R L + LY + ++ G KIT G+ Y DLSK+ +
Sbjct: 173 IRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYN 215


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1225TOXICSSTOXIN577e-12 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 56.6 bits (136), Expect = 7e-12
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 15/228 (6%)

Query: 16 LLLGTAFTQFPNTPINSSSEAKAYYINQNETNVNELTKYYSQKYLTFSNSTLWQKDNGTI 75
LLL T T F P++S+ K + N+ N+ +L +YS TF+NS + G++
Sbjct: 15 LLLATTATDFTPVPLSSNQIIKTAKASTND-NIKDLLDWYSSGSDTFTNSEVLDNSLGSM 73

Query: 76 HATLLQFSWYSHIQVYGPESWGNINQLRNKSVDIFGI---KDQETIDSFALSQETFTGGV 132
++ + S + P + + + + VD+ K Q T + + + GV
Sbjct: 74 R---IKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQI--SGV 128

Query: 133 TPA-ATSNDKHYKLNVTYKDKAETFTGGFPVYEGNKPVLTLKELDFRIRQTLIKSKKLYN 191
T L V K + + + +K L + LDF IR L + LY
Sbjct: 129 TNTEKLPTPIELPLKV--KVHGKDSPLKYG-PKFDKKQLAISTLDFEIRHQLTQIHGLYR 185

Query: 192 NSYNKGQI-KITGTDNN-YTIDLSKRLPSTDANRYVKKPQNAKIEVIL 237
+S G KIT D + Y DLSK+ + + IE +
Sbjct: 186 SSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1226TOXICSSTOXIN621e-13 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 61.6 bits (149), Expect = 1e-13
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 17/222 (7%)

Query: 2 KKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHFS 61
KK +MN ++S LLL TT+T P+S + K S N+ NI +L+ +Y+ +
Sbjct: 3 KKLLMNFFIVSP--LLLATTATDFTPVPLSSNQIIKTAKASTND-NIKDLLDWYSSGSDT 59

Query: 62 LSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGT---KDEDTV 118
+ + GS+ ++ + +F S + + + + VD+ K + T
Sbjct: 60 FTNSEVLDNSLGSMR--IKNTDGSISLIIFPSP-YYSPAFTKGEKVDLNTKRTKKSQHTS 116

Query: 119 EGYWTYDETFTGGVTPA-ATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDF 177
EG TY GVT + L +K K + G +F +K L + LDF
Sbjct: 117 EG--TYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGPKF---DKKQLAISTLDF 171

Query: 178 RIRQTLIKNKKLYNGEFNKGQI-KIT-ADGNNYTIDLSKKLK 217
IR L + LY G KIT DG+ Y DLSKK +
Sbjct: 172 EIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFE 213


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1228CARBMTKINASE389e-139 Bacterial carbamate kinase signature.
		>CARBMTKINASE#Bacterial carbamate kinase signature.

Length = 314

Score = 389 bits (1001), Expect = e-139
Identities = 145/314 (46%), Positives = 211/314 (67%), Gaps = 7/314 (2%)

Query: 1 MMAKIVVALGGNALGK-----SPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSI 55
M ++V+ALGGNAL + S +E ++ V+ TA+ + +I +G+E+VI+HGNGPQVGS+
Sbjct: 1 MGKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSL 60

Query: 56 NLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVD 115
L ++ PA P GAMSQ +IGY +Q++L+NEL GM+K+VVT++TQ VD
Sbjct: 61 LLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVD 120

Query: 116 ENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIK 175
+NDPAF NP+KP+G FY++E A+++ +EKG+I ED+GRG+RRVVPSP P +E E+IK
Sbjct: 121 KNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIK 180

Query: 176 TLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDY 235
L++ +VIA+GGGG+PVI E KG++AVIDKD L + D +ILT ++
Sbjct: 181 KLVERGVIVIASGGGGVPVILE-DGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNG 239

Query: 236 VYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLN 295
+ + TE +Q L+ V+EL++Y +E F GSM PK+ AAI FIE + ++ I L
Sbjct: 240 AALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAI-IAHLE 298

Query: 296 ELDAALEGKVGTVI 309
+ ALEGK GT +
Sbjct: 299 KAVEALEGKTGTQV 312


17SaurJH9_1367SaurJH9_1383Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1367218-1.991608hypothetical protein
SaurJH9_1368221-2.815454recombination and DNA strand exchange inhibitor
SaurJH9_1369725-9.279094thioredoxin
SaurJH9_1370319-4.296094excinuclease ABC subunit C
SaurJH9_1371419-4.414559succinate dehydrogenase/fumarate reductase
SaurJH9_1372215-3.216264succinate dehydrogenase flavoprotein subunit
SaurJH9_1373215-3.842642succinate dehydrogenase flavoprotein subunit
SaurJH9_1376115-3.907573succinate dehydrogenase iron-sulfur subunit
SaurJH9_1377-115-4.228224glutamate racemase
SaurJH9_1378-115-5.057165nucleoside-triphosphatase
SaurJH9_1379-115-4.867024phosphodiesterase
SaurJH9_1380-116-5.458279hypothetical protein
SaurJH9_1381-215-4.971683hypothetical protein
SaurJH9_1382-313-4.660423formyl peptide receptor-like 1 inhibitory
SaurJH9_1383-115-3.235055formyl peptide receptor-like 1 inhibitory
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1381ABC2TRNSPORT290.016 ABC-2 type transport system membrane protein signat...
		>ABC2TRNSPORT#ABC-2 type transport system membrane protein

signature.
Length = 262

Score = 29.1 bits (65), Expect = 0.016
Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 167 IVTIGLAVLGGLWFPINTFPNWLQHVAHVLPSYH 200
+V + L G FP++ P Q A LP H
Sbjct: 184 LVITPILFLSGAVFPVDQLPIVFQTAARFLPLSH 217


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1382PF04647330.001 Accessory gene regulator B
		>PF04647#Accessory gene regulator B

Length = 212

Score = 32.8 bits (75), Expect = 0.001
Identities = 18/112 (16%), Positives = 42/112 (37%), Gaps = 9/112 (8%)

Query: 35 WLYIISVIVFSLSYLILVIVNNRLNTLMFYILLIIHYFIICYFVFSVHPMLSLFFFYSAF 94
+ S++VF++ I +++ L+ I I + + V +P
Sbjct: 79 RCTLTSLLVFNVLAYIAHLIDPAYFQLLILIAFITSLLALLFLVPVDNP---------RN 129

Query: 95 AVPFTFKNNVKKTATNLFILTMIICTIITYLLYNNYFVAMMVYYVVISLIML 146
+ T + K T++ ++ + +I Y LY + ++ V+ L
Sbjct: 130 LISNTEQRKTLKLKTSMVLMVLFGGSIGAYRLYTHQIALAILLGVLWQTFTL 181


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1383HTHFIS629e-14 FIS bacterial regulatory protein HTH signature.
		>HTHFIS#FIS bacterial regulatory protein HTH signature.

Length = 484

Score = 62.2 bits (151), Expect = 9e-14
Identities = 23/116 (19%), Positives = 53/116 (45%), Gaps = 2/116 (1%)

Query: 2 TSLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMT 61
++++A+D +R + Q + G +++ T N + I + ++V+ D+ MP
Sbjct: 4 ATILVADDDAAIRTVLNQALSRAG-YDVRI-TSNAATLWRWIAAGDGDLVVTDVVMPDEN 61

Query: 62 GLEVLAEIRKKHLNIKVIIVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVETINK 117
++L I+K ++ V++++ KA Y+ K + EL+ I +
Sbjct: 62 AFDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIGIIGR 117


18SaurJH9_1402SaurJH9_1411Y        Y        YPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1402211-0.654726superantigen-like protein
SaurJH9_1403311-2.399293superantigen-like protein
SaurJH9_1404414-4.152841ornithine carbamoyltransferase
SaurJH9_1405212-2.675861carbamate kinase
SaurJH9_1406313-2.219195hypothetical protein
SaurJH9_140729-0.982646hypothetical protein
SaurJH9_1408210-0.714611hypothetical protein
SaurJH9_14092131.677216C4-dicarboxylate transporter/malic acid
SaurJH9_14103121.764112*hypothetical protein
SaurJH9_14112131.536916hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1403CHANLCOLICIN300.041 Channel forming colicin signature.
		>CHANLCOLICIN#Channel forming colicin signature.

Length = 522

Score = 29.7 bits (66), Expect = 0.041
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 296 QNTMLKRANEDESQ-----WNSLLEKYAETYPELAEEFKLAISGKLPKNYKDELPRFE 348
QN +L +D + +L EKY E Y ++A+E GK N + L FE
Sbjct: 337 QNNLLNSQIKDAVDATVSFYQTLTEKYGEKYSKMAQELADKSKGKKIGNVNEALAAFE 394


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1408FbpA_PF05833340.005 Fibronectin-binding protein
		>FbpA_PF05833#Fibronectin-binding protein

Length = 577

Score = 33.7 bits (77), Expect = 0.005
Identities = 39/249 (15%), Positives = 83/249 (33%), Gaps = 4/249 (1%)

Query: 241 LQARSKEILAFVNESKETAIKEYEIIEKKTLENNILKDNINQLNKNKIDFVQLKEQQPEI 300
I F E+ + + + +L N ID ++
Sbjct: 174 FDFSYDMIENFTKENSLQLNDNIFSKIFTGVSKTLSSEICFRLKNNSIDLSLSNLKEIVE 233

Query: 301 DEIEAKLKLLQDITNLLNYIENREKIETKIAN--SKKDISKTNNKILNLDCDKRNIDKEK 358
+ ++ + Y +N + N SK+D K + + K+K
Sbjct: 234 VCKDLFKEIQSNKFEFNCYTKNNSFVGFYCLNLMSKEDYKKIQYDSSSKLLENFYYAKDK 293

Query: 359 K--MLEENGDLIESKTSFIDKTRVLFNDINKYQQSYLNIECLITEGEQLGDELNNLIKGL 416
+ ++ DL + + I++ +N + + + GE L + L KGL
Sbjct: 294 SDRLKSKSSDLQKIVMNNINRCTKKDKILNNTLKKCEDKDIFKLYGELLTANIYALKKGL 353

Query: 417 EKVEDSIGNNESDYEKIIELNNAITNINNEINIIKENEKAKAELDKLLGSKQELENQINE 476
+E + +E+ I L+ T N + K+ K K + + E ++N
Sbjct: 354 SHIELANYYSENYDTVKITLDENKTPSQNVQSYYKKYNKLKKSEEAANEQLLQNEEELNY 413

Query: 477 ETTIMKNLE 485
+++ N+
Sbjct: 414 LYSVLTNIN 422


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1409MECHCHANNEL1452e-48 Bacterial mechano-sensitive ion channel signature.
		>MECHCHANNEL#Bacterial mechano-sensitive ion channel signature.

Length = 136

Score = 145 bits (367), Expect = 2e-48
Identities = 62/131 (47%), Positives = 90/131 (68%), Gaps = 11/131 (8%)

Query: 1 MLKEFKEFALKGNVLDLAIAVVMGAAFNKIISSLVENIIMPLIGKIFGSVDFAK------ 54
++KEF+EFA++GNV+DLA+ V++GAAF KI+SSLV +IIMP +G + G +DF +
Sbjct: 3 IIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVTLR 62

Query: 55 ----EWSFWGIKYGLFIQSVIDFIIIAFALFIFVKIANTL-MKKEEAEEEAVVEENVVLL 109
+ + YG+FIQ+V DF+I+AFA+F+ +K+ N L KKEE + VLL
Sbjct: 63 DAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKLNRKKEEPAAAPAPTKEEVLL 122

Query: 110 TEIRDLLREKK 120
TEIRDLL+E+
Sbjct: 123 TEIRDLLKEQN 133


19SaurJH9_1490SaurJH9_1495Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_149010122.170053tyrosine recombinase XerC
SaurJH9_149110112.077730ATP-dependent protease peptidase subunit
SaurJH9_14929112.030983ATP-dependent protease ATP-binding subunit HslU
SaurJH9_14939112.116927CodY family transcriptional regulator
SaurJH9_14949112.04633030S ribosomal protein S2
SaurJH9_14959112.003324elongation factor Ts
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1495GPOSANCHOR451e-05 Gram-positive coccus surface protein anchor signature.
		>GPOSANCHOR#Gram-positive coccus surface protein anchor signature.

Length = 539

Score = 45.4 bits (107), Expect = 1e-05
Identities = 49/323 (15%), Positives = 96/323 (29%), Gaps = 9/323 (2%)

Query: 2582 TKVRAAQTKIDQAKALLQNKEDNSQLVTSKNNLQSSVNQVPSTAGMTQQSIDN------- 2634
T +A Q L + +E + N L+ + + + D
Sbjct: 37 TNEVSAVATRSQTDTLEKVQERADKFEIENNTLKLKNSDLSFNNKALKDHNDELTEELSN 96

Query: 2635 YNAKKREAETEITAAQRVIDNGDATAQQISDEKHRVDNALTALNQAKHDLTADTHALEQA 2694
K R+ + ++ I +A + N TA + L A+ AL
Sbjct: 97 AKEKLRKNDKSLSEKASKIQELEARKADLEKALEGAMNFSTADSAKIKTLEAEKAALAAR 156

Query: 2695 VQQLNRTGTTTGKKPASITAYNNSIRALQSDLTSAKNSANAIIQKPIRTVQEVQSALTNV 2754
L + + +A ++ A ++ L + + ++ + + + +
Sbjct: 157 KADLEKALEGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTL 216

Query: 2755 NRVNERLTQAINQLVPLADNSALRTAKTKLDEEINKSVTTDGMTQSSIQAYENAKRAGQT 2814
L L T +I ++ E A
Sbjct: 217 EAEKAALAARKADL--EKALEGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMN 274

Query: 2815 ETTNAQNVINNGDATDQQIAAEKTKVEEKYNSLKQAIAGLTPDLAPLQTAKTQLQNDIDQ 2874
+T I +A + AEK +E + L L DL + AK QL+ + +
Sbjct: 275 FSTADSAKIKTLEAEKAALEAEKADLEHQSQVLNANRQSLRRDLDASREAKKQLEAEHQK 334

Query: 2875 PTSTTGMTSASVAAFNDKLSAAR 2897
++ AS + L A+R
Sbjct: 335 LEEQNKISEASRQSLRRDLDASR 357



Score = 41.2 bits (96), Expect = 2e-04
Identities = 56/339 (16%), Positives = 103/339 (30%), Gaps = 24/339 (7%)

Query: 2732 SANAIIQKPIRTVQEVQSALTNVNRVNERLTQAINQLVPLAD-----NSALRTAKTKLDE 2786
+ + T+++VQ N L + L N L + E
Sbjct: 40 VSAVATRSQTDTLEKVQERADKFEIENNTLKLKNSDLSFNNKALKDHNDELTEELSNAKE 99

Query: 2787 EINKSVTTDGMTQSSIQAYENAKRAGQTETTNAQNVINNGDATDQQIAAEKTKVEEKYNS 2846
++ K+ + S IQ E K + A N A + + AEK + +
Sbjct: 100 KLRKNDKSLSEKASKIQELEARKADLEKALEGAMNFSTADSAKIKTLEAEKAALAARKAD 159

Query: 2847 LKQAIAGLTPDLAPLQTAKTQLQNDIDQPTSTTGMTSASVAAFNDKLSAARTKIQEIDRV 2906
L++A+ G L+ + A A L A +
Sbjct: 160 LEKALEGAMNFSTADSAKIKTLEAEKAA-------LEARQAELEKALEGAM------NFS 206

Query: 2907 LASHPDVATIRQNVTAANAAKTALDQARNGLTVDKAPLENAKNQLQHSIDTQTSTTGMTQ 2966
A + T+ A A K L++A G L+ + +
Sbjct: 207 TADSAKIKTLEAEKAALAARKADLEKALEGAMNFSTADSAKIKTLEAEKAALEARQAELE 266

Query: 2967 DSINAYNAKLTAARNKVQQINQVLAGSPTVDQINTNTSAANQAKSDLDHARQALTPDKAP 3026
++ TA K++ + + + L+ RQ+L D
Sbjct: 267 KALEGAMNFSTADSAKIKTLEA------EKAALEAEKADLEHQSQVLNANRQSLRRDLDA 320

Query: 3027 LQNAKTQLEQSINQPTDTTGMTTASLNAYNQKLQAARQK 3065
+ AK QLE + + ++ AS + + L A+R+
Sbjct: 321 SREAKKQLEAEHQKLEEQNKISEASRQSLRRDLDASREA 359



Score = 38.1 bits (88), Expect = 0.002
Identities = 46/342 (13%), Positives = 103/342 (30%), Gaps = 28/342 (8%)

Query: 9668 KLKEIEASNATDQDKLIAKNKAEELANSIINNINKA---TSNQAVSQVQTAGNHAIEQVH 9724
K++E + + L KN N + + N + A +++ E+
Sbjct: 54 KVQERADKFEIENNTLKLKNSDLSFNNKALKDHNDELTEELSNAKEKLRKNDKSLSEKAS 113

Query: 9725 ANEIPKAKIDANKDVDKQVQALIDEIDRNPNLTDKEKQALKDRINQILQQGHNDINNALT 9784
+ +A+ + + + EK AL R L++ N T
Sbjct: 114 KIQELEARKADLEKALEGAMNFSTADSAKIKTLEAEKAALAAR-KADLEKALEGAMNFST 172

Query: 9785 K--EEIEQAKAQLAQALQDIKDLVKAKEDAKQDVDKQVQALIDEIDQNPNLTDKEKQALK 9842
+I+ +A+ A +L KA E A + + L ++ K
Sbjct: 173 ADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLEK 232

Query: 9843 DRINQILQQGHNGINNAMTKEEIEQAKAQLAQALKEIKDLVKAKENAKQDVDKQVQALID 9902
+ + + E +A+ A+ K ++ + + ++A
Sbjct: 233 ALEGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKT-LEAEKA 291

Query: 9903 EIDQNPNLTDKEKQALKDRINQILQQGHNDINNAMTKEEIEQAKAQLAQALQDIKDLVKA 9962
++ + + Q L + + L + + K L
Sbjct: 292 ALEAEKADLEHQSQVL--------------------NANRQSLRRDLDASREAKKQLEAE 331

Query: 9963 KEDAKNAIKALANAKRDQINSNPDLTPEQKAKALKEIDEAEK 10004
+ + K + A R + + D + E K + E + E+
Sbjct: 332 HQKLEEQNKI-SEASRQSLRRDLDASREAKKQLEAEHQKLEE 372


20SaurJH9_1594SaurJH9_1604Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1594013-3.204931hypothetical protein
SaurJH9_1595217-4.947049aconitate hydratase
SaurJH9_1596222-6.378959hypothetical protein
SaurJH9_1597221-5.394166hypothetical protein
SaurJH9_1598119-4.387412hypothetical protein
SaurJH9_1599017-4.167855hypothetical protein
SaurJH9_1600114-2.600954DNA topoisomerase IV subunit B
SaurJH9_1601115-2.684158DNA topoisomerase IV subunit A
SaurJH9_1602-112-2.872264amino acid carrier protein
SaurJH9_1603014-3.224574transcription antiterminator
SaurJH9_1604-112-3.408846hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1599BCTERIALGSPH405e-07 Bacterial general secretion pathway protein H signa...
		>BCTERIALGSPH#Bacterial general secretion pathway protein H

signature.
Length = 170

Score = 40.3 bits (94), Expect = 5e-07
Identities = 14/79 (17%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 5 KQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEA-NIISFITELNYIKSQAIAN 63
+Q FT++EM+++++L+ + + + + S D A + F +L +++ + +
Sbjct: 2 RQRGFTLLEMMLILLLMGVSAGMVLLAFPAS---RDDSAAQTLARFEAQLRFVQQRGLQT 58

Query: 64 QGYINVRFYENSDTIKVIE 82
+ V + + V+E
Sbjct: 59 GQFFGVSVHPDRWQFLVLE 77


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1600BCTERIALGSPG469e-10 Bacterial general secretion pathway protein G signa...
		>BCTERIALGSPG#Bacterial general secretion pathway protein G

signature.
Length = 145

Score = 46.4 bits (110), Expect = 9e-10
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 3 KFLKKTQAFTLIEMLLVLLIISLLLILIIPNI--AKQTAHIQSTGCNAQVKMVNSQIEAY 60
+ K + FTL+E+++V++II +L L++PN+ K+ A Q + + + + ++ Y
Sbjct: 2 RATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKA--VSDIVALENALDMY 59

Query: 61 ALKHNRNPSSIEDLIA 76
L ++ P++ + L +
Sbjct: 60 KLDNHHYPTTNQGLES 75


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1601BCTERIALGSPF844e-20 Bacterial general secretion pathway protein F signa...
		>BCTERIALGSPF#Bacterial general secretion pathway protein F

signature.
Length = 408

Score = 84.1 bits (208), Expect = 4e-20
Identities = 65/347 (18%), Positives = 137/347 (39%), Gaps = 6/347 (1%)

Query: 14 KKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKN-KQLGTTILSEISNGAPC 72
+K +LS + L L L+ L ++ + Q + QL + S++ G
Sbjct: 61 RKIRLSTSDLALLTRQLATLVAASMPLEEALDAVAKQSEKPHLSQLMAAVRSKVMEGHSL 120

Query: 73 NQIL-SLIGYSDTI-VMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILV 130
+ G + + V E G++ VL +Y + ++ R+ + + YP +L
Sbjct: 121 ADAMKCFPGSFERLYCAMVAAGETSGHLDAVLNRLADYTEQRQQMRSRIQQAMIYPCVLT 180

Query: 131 SIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVMLIIVSMLAII 190
+ IA++ IL V+P+ + + M L + L ++ T ML+ + +
Sbjct: 181 VVAIAVVSILLSVVVPKVVEQFIHMKQALPLSTRVLMGMSDAVRTFGPWMLLALLAGFMA 240

Query: 191 MKLIYNNLNMLNKIN-FVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQSIVDVYINH 249
+++ + ++ LPLI + T L + + + L + + +
Sbjct: 241 FRVMLRQEKRRVSFHRRLLHLPLIGRIARGLNTARYARTLSILNASAVPLLQAMRISGDV 300

Query: 250 SS-DPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQ 308
S D R L E G L + LE+ F P + + GE+ G+L+ L+ +
Sbjct: 301 MSNDYARHRLSLATDAVRE-GVSLHKALEQTALFPPMMRHMIASGERSGELDSMLERAAD 359

Query: 309 ILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSI 355
++ + +P+L + + ++ I L I+ P+ Q+ +
Sbjct: 360 NQDREFSSQMTLALGLFEPLLVVSMAAVVLFIVLAILQPILQLNTLM 406


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1603SHIGARICIN270.039 Ribosome inactivating protein family signature.
		>SHIGARICIN#Ribosome inactivating protein family signature.

Length = 289

Score = 27.5 bits (61), Expect = 0.039
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 82 DFLKDPVKNGADKFKQYGLPIITSKVTPEK-------LNEGSTEIE-GFKFNVLHTPGHS 133
F+ + K + K Y +P++ S + + N I ++ G+
Sbjct: 39 VFISNLRKALPYERKLYDIPLLRSTLPGSQRYALIHLTNYADETISVAIDVTNVYVMGYR 98

Query: 134 PGSLTYVFDEFAVVG--DTLFNNGIGRTDL-YKGDYETL 169
G +Y F+E + +F + + L Y G+YE L
Sbjct: 99 AGDTSYFFNEASATEAAKYVFKDAKRKVTLPYSGNYERL 137


21SaurJH9_1640SaurJH9_1647Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1640-213-3.420110aspartate kinase
SaurJH9_1641-112-2.949440aspartate semialdehyde dehydrogenase
SaurJH9_1642-112-3.388600dihydrodipicolinate synthase
SaurJH9_1643-115-4.672496dihydrodipicolinate reductase
SaurJH9_1644-115-4.495207tetrahydrodipicolinate succinyltransferase
SaurJH9_1645-115-3.754733amidohydrolase
SaurJH9_1646216-1.856846alanine racemase
SaurJH9_1647217-2.332521diaminopimelate decarboxylase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1642TCRTETOQM1842e-52 Tetracycline resistance protein TetO/TetQ/TetM family ...
		>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family

signature.
Length = 639

Score = 184 bits (468), Expect = 2e-52
Identities = 106/439 (24%), Positives = 184/439 (41%), Gaps = 89/439 (20%)

Query: 12 NIRNFSIIAHIDHGKSTLADRILEN---TKSVETRDMQDQLLDSMDLERERGITIKLNAV 68
I N ++AH+D GK+TL + +L N + + D D+ LER+RGITI+
Sbjct: 2 KIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGIT 61

Query: 69 RLKYEAKDGNTYTFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLA 128
++E N +IDTPGH+DF EV RSL+ +GAIL++ A G++AQT +
Sbjct: 62 SFQWENTKVN-----IIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHAL 116

Query: 129 LDNELELLPVINKIDLPAAEPERV--------------KQEIE--------DMIGLDQDD 166
+ + INKID + V KQ++E + +Q D
Sbjct: 117 RKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNMCVTNFTESEQWD 176

Query: 167 VVLA---------------------------------------SAKSNIGIEEILEKIVE 187
V+ SAK+NIGI+ ++E I
Sbjct: 177 TVIEGNDDLLEKYMSGKSLEALELEQEESIRFHNCSLFPVYHGSAKNNIGIDNLIEVITN 236

Query: 188 VVPAPDGDPEAPLKALIFDSEYDPYRGVISSIRIVDGVVKAGDKIRMMATGKEFEVTEVG 247
+ ++ L +F EY R ++ IR+ GV+ D +R+ K ++TE
Sbjct: 237 KFYSSTHRGQSELCGKVFKIEYSEKRQRLAYIRLYSGVLHLRDSVRISEKEKI-KITE-- 293

Query: 248 INTPKQ---LPVDELTVGDVGYIIASIKNVDDSRVGDTITLASRPASEPLQGYKKMNPMV 304
+ T +D+ G++ + ++ +GDT L P E ++ P++
Sbjct: 294 MYTSINGELCKIDKAYSGEIVILQNEFLKLNSV-LGDTKLL---PQRERIENPL---PLL 346

Query: 305 YCGLFPIDNKNYNDLREALEKLQLNDASLEFE--PESSQALGFGYRTGFLGMLHMEIIQE 362
+ P + L +AL ++ +D L + + + + FLG + ME+
Sbjct: 347 QTTVEPSKPQQREMLLDALLEISDSDPLLRYYVDSATHEII-----LSFLGKVQMEVTCA 401

Query: 363 RIEREFGIELIATAPSVIY 381
++ ++ +E+ P+VIY
Sbjct: 402 LLQEKYHVEIEIKEPTVIY 420



Score = 35.6 bits (82), Expect = 6e-04
Identities = 12/75 (16%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 408 IFEPYVRATMMVPNDYVGAVMELCQRKRGQFINMDYLDDIRVNIVYELPLAEVVFDFFDQ 467
+ EPY+ + P +Y+ + ++ ++ V + E+P + ++
Sbjct: 535 LLEPYLSFKIYAPQEYLSRAYTDAPKYCANIVDTQLKNNE-VILSGEIPARC-IQEYRSD 592

Query: 468 LKSNTKGYASFDYEF 482
L T G + E
Sbjct: 593 LTFFTNGRSVCLTEL 607


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1647IGASERPTASE280.034 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 28.1 bits (62), Expect = 0.034
Identities = 33/190 (17%), Positives = 71/190 (37%), Gaps = 27/190 (14%)

Query: 37 QDDYTSRNFENKDTALKQSTSE---------NNSLSKLEDVQVKDGDNSKNKGPVYVDVK 87
+DD+ +RNF+ + + S ++++ QV G + + V D
Sbjct: 733 EDDWINRNFKATTMNVTGNASLYSGRNVANITSNITASNKAQVHIGYKTGDTVCVRSDYT 792

Query: 88 GAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQ 147
G V D+ ++ + L +V+ + + + +F + + N + +
Sbjct: 793 GYV---TCTTDKLSDKALNSFNPTNL--RGNVNLTESANFVLGKANLFGTIQSRGNSQVR 847

Query: 148 IEVNS-------VHVKNGNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQ 200
+ NS V + N ++LN+A S +V N++ + G+F
Sbjct: 848 LTENSHWHLTGNSDVHQLDLANGHIHLNSADNSN--NVTKYNTLTVNSL----SGNGSFY 901

Query: 201 EIDDLKKVKG 210
+ DL +G
Sbjct: 902 YLTDLSNKQG 911


22SaurJH9_1699SaurJH9_1716Y        NNGenomic Island
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_16992150.925149hypothetical protein
SaurJH9_17000130.139681Holliday junction-specific endonuclease
SaurJH9_17010120.036916glycosyl transferase family protein
SaurJH9_1702013-1.252846hypothetical protein
SaurJH9_1703-212-2.530579hypothetical protein
SaurJH9_1704-114-3.146067endonuclease III
SaurJH9_1705-116-2.969692primosome subunit DnaD
SaurJH9_1706219-2.279271asparaginyl-tRNA synthetase
SaurJH9_1707125-0.950621DnaQ family exonuclease/DinG family helicase
SaurJH9_1708225-1.277285biotin--acetyl-CoA-carboxylase ligase
SaurJH9_17096280.462777tRNA CCA-pyrophosphorylase
SaurJH9_17107260.352147group 1 glycosyl transferase
SaurJH9_171110260.183729hypothetical protein
SaurJH9_17121025-0.135491hypothetical protein
SaurJH9_17131023-0.463930hypothetical protein
SaurJH9_1714923-0.982897hypothetical protein
SaurJH9_1715518-1.452200hypothetical protein
SaurJH9_1716210-0.617307hypothetical protein
23SaurJH9_1791SaurJH9_1811Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1791212-0.353207hypothetical protein
SaurJH9_1792213-0.459402biotin/lipoate A/B protein ligase
SaurJH9_1793313-0.795428rhodanese domain-containing protein
SaurJH9_1794013-0.852297glycine dehydrogenase subunit 2
SaurJH9_1795012-0.736524glycine dehydrogenase subunit 1
SaurJH9_1796012-0.641735glycine cleavage system aminomethyltransferase
SaurJH9_1797-114-1.097693shikimate kinase
SaurJH9_1798112-1.038833hypothetical protein
SaurJH9_1799212-0.298093hypothetical protein
SaurJH9_1800013-0.408688hypothetical protein
SaurJH9_1801112-0.174483competence protein ComGC-like protein
SaurJH9_1802-113-0.136867hypothetical protein
SaurJH9_1803-211-0.838072type II secretion system protein
SaurJH9_1804-212-0.915377type II secretion system protein E
SaurJH9_1805-111-0.583399beta-lactamase domain-containing protein
SaurJH9_18061100.392366hypothetical protein
SaurJH9_18072100.306137ROK family glucokinase
SaurJH9_1808090.522468hypothetical protein
SaurJH9_1809180.835897rhomboid family protein
SaurJH9_1810181.3244665-formyltetrahydrofolate cyclo-ligase
SaurJH9_1811281.16967550S ribosomal protein L33
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1793IGASERPTASE401e-05 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 40.4 bits (94), Expect = 1e-05
Identities = 38/263 (14%), Positives = 95/263 (36%), Gaps = 22/263 (8%)

Query: 52 QKADDLKVKEQELSQKFEERKTQLEETVAYTKERVEGFLNKSKNEQAALKAQQAAIKEEA 111
Q++ ++ EQ+ ++ + + +E + K + +++ + Q KE A
Sbjct: 1046 QESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQT-NEVAQSGSETKETQTTETKETA 1104

Query: 112 SANNLSDTSQEAQEIQEAKREAQAEADKSVAVSNEESKASALKVQQAAIKEEASANNLSD 171
+ E + +A+ E +K+ V S+ S + Q ++ +A +D
Sbjct: 1105 T--------------VEKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPAREND 1150

Query: 172 TSQEAQEIQEAKKEAQAETDKSAAVSNEEPKAVALKAQQAAIKEEASANNLSDTSQEAQE 231
+ +E Q ++ A+T++ A ++ + ++ N + T Q
Sbjct: 1151 PTVNIKEPQ-SQTNTTADTEQPAKETSSNVEQPVTESTTVNTGNSVVENPENTTPATTQP 1209

Query: 232 VQEAKKEAQAEKDSDTSTKDASAAKVEVSKPESQAERLANAAKQKQAKLTPGSKESQLTE 291
+E + + + + E + + LT + + L++
Sbjct: 1210 ------TVNSESSNKPKNRHRRSVRSVPHNVEPATTSSNDRSTVALCDLTSTNTNAVLSD 1263

Query: 292 ALFAEKPVAKNDLKEIPQLVTKK 314
A + VA N K + Q +++
Sbjct: 1264 ARAKAQFVALNVGKAVSQHISQL 1286



Score = 38.1 bits (88), Expect = 8e-05
Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 17/332 (5%)

Query: 101 KAQQAAIKEEASANNLSDTSQEAQEIQEAKREAQAEADKSVAVSNEESKASALKVQQAAI 160
K Q + N + + EA S+ + + +
Sbjct: 987 KRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPPAPATPSETTETVAENSKQ 1046

Query: 161 KEEASANNLSDTSQEAQEIQEAKKEAQAET-DKSAAVSNEEPKAVALKAQQAAIKEEASA 219
+ + N D ++ + +E KEA++ + + + + Q KE A
Sbjct: 1047 ESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKETQTTETKETA-- 1104

Query: 220 NNLSDTSQEAQEVQEAKKEAQAEKDSDTSTKDASAAKVEVSKPESQAERLANAAKQKQAK 279
+ E +E + + E E TS + E +P+++ R + +
Sbjct: 1105 ------TVEKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPARENDPTVNIKEP 1158

Query: 280 LTPGSKESQLTEALFAEKPVAKNDLKEIPQLVTKKNDVSETETVNIDNKDTVKQKEAKFE 339
+ + + TE E V N V E N T ++
Sbjct: 1159 QSQTNTTAD-TEQPAKETSSNVEQPVTESTTVNTGNSVVEN-PENTTPATTQPTVNSESS 1216

Query: 340 NGVITRKADEKTTNNTAVDKKSGKQSKKTTPSNKRNASKASTNKTSGQKKQHNKKSSQGA 399
N R + V+ + + ++T + S + S + ++
Sbjct: 1217 NKPKNRHRRSVRSVPHNVEPATTSSNDRSTVALCDLTSTNTNAVLS------DARAKAQF 1270

Query: 400 KKQSSSSKLTQKNNQTSNKNSKTTNAKSSNAS 431
+ ++Q +Q N N SN S
Sbjct: 1271 VALNVGKAVSQHISQLEMNNEGQYNVWVSNTS 1302



Score = 36.6 bits (84), Expect = 2e-04
Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 3/222 (1%)

Query: 72 KTQLEETVAYTKERVEGFLNKSKNEQAALKAQQAAIKEEASANNLSD-TSQEAQEIQEAK 130
+ EE + V + +E A+ + + + N D T AQ + AK
Sbjct: 1011 PSNNEEIARVDEAPVPPPAPATPSETTETVAENSKQESKTVEKNEQDATETTAQNREVAK 1070

Query: 131 REAQAEADKSVAVSNEESKASALKVQQAAIKEEASANNLSDTSQEAQEIQEAKKEAQAET 190
+ +S + + Q KE A+ E ++ QE K +
Sbjct: 1071 EAKSNVKANTQTNEVAQSGSETKETQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVS 1130

Query: 191 DKSAAVSNEEPKAVALKAQQAA--IKEEASANNLSDTSQEAQEVQEAKKEAQAEKDSDTS 248
K +P+A + IKE S N + +++ + + E + + +
Sbjct: 1131 PKQEQSETVQPQAEPARENDPTVNIKEPQSQTNTTADTEQPAKETSSNVEQPVTESTTVN 1190

Query: 249 TKDASAAKVEVSKPESQAERLANAAKQKQAKLTPGSKESQLT 290
T ++ E + P + + + + K S S
Sbjct: 1191 TGNSVVENPENTTPATTQPTVNSESSNKPKNRHRRSVRSVPH 1232


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1811IGASERPTASE360.002 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 36.2 bits (83), Expect = 0.002
Identities = 48/321 (14%), Positives = 89/321 (27%), Gaps = 18/321 (5%)

Query: 1323 QNQTNDQVDTTTNQAVNAIDNVEAEVVIKPTAIADIEKAVKEKQQQIDNSLDSTDNEKEV 1382
+ N VDTT N I V IA +++A S + +
Sbjct: 985 VEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPPAPATPSETTETVAENS 1044

Query: 1383 ASQALAKEKEKALAAIDQAQTNSQVNQAATNGVSAIKIIQPETKVKPAAREKINQKANEL 1442
++ EK + A AQ +A + K E +
Sbjct: 1045 KQESKTVEKNEQDATETTAQNREVAKEA-----------KSNVKANTQTNEVAQSGSETK 1093

Query: 1443 RAKINQDKEATAEERQ----VALDKINEFVNQAMTDITNNRTNQQVDDTTSQALDSIALV 1498
+ + KE E++ V +K E ++ V A ++ V
Sbjct: 1094 ETQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPARENDPTV 1153

Query: 1499 APEHIVRAAARDAVKQQYEAKKQEIEQAEHATDEEKQVALNQLANNEKLALQNINQAVTN 1558
+ A +Q AK+ + T+ N + N + Q N
Sbjct: 1154 NIKEPQSQTNTTADTEQ-PAKETSSNVEQPVTESTTVNTGNSVVENPENTTPATTQPTVN 1212

Query: 1559 NDVKRVETNGIATLKGVQPHIVIKPEAQQAIKATAENQVESIKDTPHATVDELDEANQLI 1618
++ N PH V +P + + + +A + + Q +
Sbjct: 1213 SESSNKPKNRHRRSVRSVPHNV-EPATTSSNDRSTVALCDLTSTNTNAVLSDARAKAQFV 1271

Query: 1619 S-DTLKQAQQEIENTNQDAAV 1638
+ + K Q I +
Sbjct: 1272 ALNVGKAVSQHISQLEMNNEG 1292


24SaurJH9_1825SaurJH9_1831Y        NNGenomic Island
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1825-119-3.041912glycyl-tRNA synthetase
SaurJH9_1826018-3.552686DNA repair protein RecO
SaurJH9_1827-116-4.706593GTP-binding protein Era
SaurJH9_1828013-3.983352cytidine deaminase
SaurJH9_1829114-4.375763diacylglycerol kinase
SaurJH9_1830116-3.346669hypothetical protein
SaurJH9_1831315-3.061478PhoH family protein
25SaurJH9_1853SaurJH9_1879Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1853418-3.634574hypothetical protein
SaurJH9_1854116-0.778746hypothetical protein
SaurJH9_1855014-0.205307hypothetical protein
SaurJH9_1856-113-0.069924nicotinate (nicotinamide) nucleotide
SaurJH9_1858-211-0.170658hypothetical protein
SaurJH9_1859-110-0.087566shikimate 5-dehydrogenase
SaurJH9_1860-1130.981498GTP-binding protein YqeH
SaurJH9_1861211-1.671275HAD family phosphatase
SaurJH9_1862113-2.222932adenosylhomocysteine nucleosidase
SaurJH9_1863013-3.403478hypothetical protein
SaurJH9_1864115-4.653037toxin OB-fold domain-containing protein
SaurJH9_1865114-4.562357manganese transporter NRAMP
SaurJH9_1866212-3.732736hypothetical protein
SaurJH9_1867112-3.637038LamB/YcsF family protein
SaurJH9_1868214-4.593625carbamoyl-phosphate synthase subunit L
SaurJH9_1869313-4.205297biotin/lipoyl attachment domain-containing
SaurJH9_1870214-3.885663hypothetical protein
SaurJH9_1871316-5.098573hypothetical protein
SaurJH9_1872620-6.662302transcription elongation factor GreA
SaurJH9_1874719-6.954318uridine kinase
SaurJH9_1875919-6.742007peptidase U32
SaurJH9_1876921-6.779574peptidase U32
SaurJH9_1877820-7.017810O-methyltransferase family protein
SaurJH9_1878719-6.179078hypothetical protein
SaurJH9_1879315-4.013074Holliday junction resolvase-like protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1861V8PROTEASE1159e-33 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 115 bits (289), Expect = 9e-33
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 26/227 (11%)

Query: 30 IQQTAKA-----ENSVKLITNTNVAPYSGVTWMGA--------GTGFVVGNHTIITNKHV 76
++Q A N IT+T Y+ VT++ +G VVG T++TNKHV
Sbjct: 61 LEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHV 120

Query: 77 TYHM-KVGDEIKAHPNGFY--NNGGGLYKVTKIVDYPGKEDIAVVQVEEKSTQPKGRKFK 133
+KA P+ N G + +I Y G+ D+A+V+ + +
Sbjct: 121 VDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSP---NEQNKHIG 177

Query: 134 DFTSKFNIA--SEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNIVSSDAIIQPGS 191
+ ++ +E + N+ I+V GYP + M+ES GK+ + G + D G+
Sbjct: 178 EVVKPATMSNNAETQVNQNITVTGYP-GDKPVATMWESKGKITYLKGEAMQYDLSTTGGN 236

Query: 192 SGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLD 238
SGSP+ N K+E IG+ + G AV+ + ++ F+ N++
Sbjct: 237 SGSPVFNEKNEVIGIHWGGVPNEF----NGAVFINENVRNFLKQNIE 279


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1862V8PROTEASE1787e-57 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 178 bits (452), Expect = 7e-57
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 23/217 (10%)

Query: 37 EKNVTQVKDTNNFPYNGVVSFK--------DATGFVIGKNTIITNKHV-SKDYKVGDRIT 87
+ Q+ DT N Y V + A+G V+GK+T++TNKHV + +
Sbjct: 73 NNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALK 132

Query: 88 AHP---NGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK 144
A P N D G + + I+ Y G+ D++++ + + E V+ +
Sbjct: 133 AFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK-----HIGEVVKPATMSN 187

Query: 145 DA--KVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNN 202
+A +V+ I V GYP +ES G I +K + +D GNSGSPV N N
Sbjct: 188 NAETQVNQNITVTGYPGDK-PVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKN 246

Query: 203 EVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ 239
EVIG+ +GG + +E+NGAV+ +++F++++IE
Sbjct: 247 EVIGIHWGG---VPNEFNGAVFINENVRNFLKQNIED 280


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1863V8PROTEASE1824e-58 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 182 bits (462), Expect = 4e-58
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 29/230 (12%)

Query: 43 EVQQTAKA-----ENNVTKIQDTNIFPYTGVVAFKS--------ATGFVVGKNTILTNKH 89
++Q A N+ +I DT Y V + A+G VVGK+T+LTNKH
Sbjct: 60 PLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKH 119

Query: 90 V-SKNYKVGDRITAHP---NSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGF 145
V + + A P N D G ++ ++I Y G+ D+++++ +
Sbjct: 120 VVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK----- 174

Query: 146 NFNDNVTPFKYAAGA--KAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGSSIVYSAHTE 203
+ + V P + A + + I V GYP K ++ES G + ++G ++ Y T
Sbjct: 175 HIGEVVKPATMSNNAETQVNQNITVTGYPGD-KPVATMWESKGKITYLKGEAMQYDLSTT 233

Query: 204 SGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENID 253
GNSGSPV N NE++GIH+ V N+ N V+ ++ F+ +NI+
Sbjct: 234 GGNSGSPVFNEKNEVIGIHWGG-VPNEFNG---AVFINENVRNFLKQNIE 279


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1864V8PROTEASE1381e-41 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 138 bits (349), Expect = 1e-41
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)

Query: 36 EKNVKEITDATKAPYNSVVAFA--------GGTGVVVGKNTIVTNKHIAKSNDIFKNRVA 87
+ +ITD T Y V +GVVVGK+T++TNKH+ + + +
Sbjct: 73 NNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALK 132

Query: 88 AHYS---SKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSYTKFAEGA-- 142
A S G + + I +Y G+ DLAIV + + + + V + A
Sbjct: 133 AFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVK-FSPNEQNKHIGEVVKPATMSNNAET 191

Query: 143 KAKDRISVIGYPKGAQTKYKMFESTGTINHISGTFIEFDAYAQPGNSGSPVLNSKHELIG 202
+ I+V GYP G + M+ES G I ++ G +++D GNSGSPV N K+E+IG
Sbjct: 192 QVNQNITVTGYP-GDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIG 250

Query: 203 ILYAGSGKDESEKNFGVYFTPQLKEFIQNNIE 234
I + G +E N V+ ++ F++ NIE
Sbjct: 251 IHWGGVP---NEFNGAVFINENVRNFLKQNIE 279


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1870BICOMPNTOXIN396e-141 Staphylococcal bi-component toxin signature.
		>BICOMPNTOXIN#Staphylococcal bi-component toxin signature.

Length = 315

Score = 396 bits (1020), Expect = e-141
Identities = 96/329 (29%), Positives = 177/329 (53%), Gaps = 24/329 (7%)

Query: 1 MKMKKLVKSSVASSIALLLLSNTVDAAQHITPVSEKKVDDKITLYKTTATSDNDKLNISQ 60
M K++ ++++ S+ L + ++ A+ + I + K T ++K ++Q
Sbjct: 1 MLKNKILTTTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQ 60

Query: 61 ILTFNFIKDKSYDKDTLVLKAAGNINSGYKKPNPKDYNYSQ-FYWGGKYNVSVSSESNDA 119
+ F+F+KDK Y+KD L+LK G I+S N K N+ + W +YN+ + + +
Sbjct: 61 NIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTN-DKY 119

Query: 120 VNVVDYAPKNQNEEFQVQQTLGYSYGGDINISNGLSGGLNGSKSFSETINYKQESYRTTI 179
V++++Y PKN+ E V QTLGY+ GG+ + L G NGS ++S++I+Y Q++Y + +
Sbjct: 120 VSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGG--NGSFNYSKSISYTQQNYVSEV 177

Query: 180 DRKTNHKSIGWGVEAHKIMNNGWGPYGRDSYDPTYGNELFLGGRQSSSNAGQNFLPTHQM 239
+++ N KS+ WGV+A+ + ++LF+G + S + F+P ++
Sbjct: 178 EQQ-NSKSVLWGVKANSFAT-------ESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSEL 229

Query: 240 PLLARGNFNPEFISVLSHKQNDTKKSKIKVTYQREMD---------RYTNQWNRLHWIGN 290
P L + FNP FI+ +SH++ + S+ ++TY R MD Y N + H + N
Sbjct: 230 PPLVQSGFNPSFIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHN 289

Query: 291 NYKNQNTVTFTSTYEVDWQNHTVKLIGTD 319
+ N+N +T YEV+W+ H +K+ G +
Sbjct: 290 AFVNRN---YTVKYEVNWKTHEIKVKGQN 315


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1871BICOMPNTOXIN431e-155 Staphylococcal bi-component toxin signature.
		>BICOMPNTOXIN#Staphylococcal bi-component toxin signature.

Length = 315

Score = 431 bits (1110), Expect = e-155
Identities = 213/318 (66%), Positives = 255/318 (80%), Gaps = 10/318 (3%)

Query: 1 MFKKKMLAATLSVGLIAPLASPIQE-SRANTNIENIGDGA--EVIKRTEDVSSKKWGVTQ 57
M K K+L TLSV L+APLA+P+ E ++A + E+IG G+ E+IKRTED +S KWGVTQ
Sbjct: 1 MLKNKILTTTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQ 60

Query: 58 NVQFDFVKDKKYNKDALIVKMQGFINSRTSFSDVKGSGYELTKRMIWPFQYNIGLTTKDP 117
N+QFDFVKDKKYNKDALI+KMQGFI+SRT++ + K + + K M WPFQYNIGL T D
Sbjct: 61 NIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNH--VKAMRWPFQYNIGLKTNDK 118

Query: 118 NVSLINYLPKNKIETTDVGQTLGYNIGGNFQSAPSIGGNGSFNYSKTISYTQKSYVSEVD 177
VSLINYLPKNKIE+T+V QTLGYNIGGNFQSAPS+GGNGSFNYSK+ISYTQ++YVSEV+
Sbjct: 119 YVSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSISYTQQNYVSEVE 178

Query: 178 KQNSKSVKWGAKANEFVTPDGKKSAHDRYLFVQSPNGPTGSAREYFAPDNQLPPLVQSGF 237
+QNSKSV WG KAN F T G+KSA D LFV + R+YF PD++LPPLVQSGF
Sbjct: 179 QQNSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPH-SKDPRDYFVPDSELPPLVQSGF 237

Query: 238 NPSFITTLSHEKGSSDTSEFEISYGRNLDITYA----TLFPRTGIYAERKHNAFVNRNFV 293
NPSFI T+SHEKGSSDTSEFEI+YGRN+D+T+A T + + + R HNAFVNRN+
Sbjct: 238 NPSFIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAFVNRNYT 297

Query: 294 VRYEVNWKTHEIKVKGHN 311
V+YEVNWKTHEIKVKG N
Sbjct: 298 VKYEVNWKTHEIKVKGQN 315


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1878BACTRLTOXIN1954e-64 Bacterial toxin signature.
		>BACTRLTOXIN#Bacterial toxin signature.

Length = 266

Score = 195 bits (497), Expect = 4e-64
Identities = 109/261 (41%), Positives = 155/261 (59%), Gaps = 11/261 (4%)

Query: 4 LSTVIIILILEIVFHNMN-YVNAQPDPKLDELNKVSDYKNNKGTMGNVMNLYTSPPVEGR 62
+S VI+I L +V N +QPDP D+L+K S++ GTMGN+ LY V
Sbjct: 7 ISRVILIFALILVISTPNVLAESQPDPMPDDLHKSSEFT---GTMGNMKYLYDDHYVSAT 63

Query: 63 GVINSRQFLSHDLIFPI---EYKSYNEVKTELENTELANNYKDKKVDIFGVPYFYTCIIP 119
V + +FL+HDLI+ I + K+Y++VKTEL N +LA YKD+ VD++G Y+ C
Sbjct: 64 KVKSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKDEVVDVYGSNYYVNCYFS 123

Query: 120 KSEPDINQNFGGCCMYGGLTF---NSSENERDKLITVQVTIDNRQSLGFTITTNKNMVTI 176
+ G CMYGG+T N +N + + V+V + R ++ F + T+K VT
Sbjct: 124 SKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENKRNTISFEVQTDKKSVTA 183

Query: 177 QELDYKARHWLTKEKKLYEFDGSAFESGYIKFTEKNNTSFWFDLFPKKELVPFVPYKFLN 236
QELD KAR++L +K LYEF+ S +E+GYIKF E N +FW+D+ P F K+L
Sbjct: 184 QELDIKARNFLINKKNLYEFNSSPYETGYIKFIENNGNTFWYDMMPAPGDK-FDQSKYLM 242

Query: 237 IYGDNKVVDSKSIKMEVFLNT 257
+Y DNK VDSKS+K+EV L T
Sbjct: 243 MYNDNKTVDSKSVKIEVHLTT 263


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1879BACTRLTOXIN1559e-49 Bacterial toxin signature.
		>BACTRLTOXIN#Bacterial toxin signature.

Length = 266

Score = 155 bits (394), Expect = 9e-49
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 21/265 (7%)

Query: 2 RLFYIAAIII-TLLCLINNNYVNAEV----DKKDLKKKSDLDSSKLFNLTSYYTDITWQL 56
RLF I+I L+ +I+ V AE DL K S+ + + N+ Y D +
Sbjct: 4 RLFISRVILIFALILVISTPNVLAESQPDPMPDDLHKSSEF-TGTMGNMKYLYDDH--YV 60

Query: 57 DESNKISTDQLLNNTIILKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFGNKC 116
+ S D+ L + +I D + +K E + DLA ++K + +D+YG + C
Sbjct: 61 SATKVKSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKDEVVDVYGSNYYVNC 120

Query: 117 -------VGLTEEKTSCLYGGVTIHDGNQLDEEKV--IGVNVFKDGVQQEGFVIKTKKAK 167
VG +C+YGG+T H+GN D + + V V+++ F ++T K
Sbjct: 121 YFSSKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENKRNTISFEVQTDKKS 180

Query: 168 VTVQELDTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVG--A 225
VT QELD K R L N +Y ++ + G I F +N +F+YD+ G +
Sbjct: 181 VTAQELDIKARNFLINKKNLYEFNSSPYETGYIKFIENN--GNTFWYDMMPAPGDKFDQS 238

Query: 226 EFFQFYSDNRTVSSSNYHIDVFLYK 250
++ Y+DN+TV S + I+V L
Sbjct: 239 KYLMMYNDNKTVDSKSVKIEVHLTT 263


26SaurJH9_1979SaurJH9_2058Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1979-114-3.202657hypothetical protein
SaurJH9_1981013-3.316361thiol peroxidase
SaurJH9_1982-111-3.613010hypothetical protein
SaurJH9_1983-111-4.757157thiamine biosynthesis protein ThiI
SaurJH9_1984011-5.194085class V aminotransferase
SaurJH9_1985111-4.666231septation ring formation regulator EzrA
SaurJH9_1986112-4.238146hypothetical protein
SaurJH9_1987013-4.85809330S ribosomal protein S4
SaurJH9_1988215-4.319972glycerophosphoryl diester phosphodiesterase
SaurJH9_1989013-2.683101OsmC family protein
SaurJH9_1990014-2.149945class V aminotransferase
SaurJH9_1991-114-3.598693D-3-phosphoglycerate dehydrogenase
SaurJH9_1992015-3.763156hypothetical protein
SaurJH9_1993-116-3.885289PTS system, N-acetylglucosamine-specific IIBC
SaurJH9_1994016-4.039063hypothetical protein
SaurJH9_1995316-5.8920381-acyl-sn-glycerol-3-phosphate acyltransferase
SaurJH9_1996316-4.9286352-alkenal reductase
SaurJH9_1997317-3.289546tyrosyl-tRNA synthetase
SaurJH9_1998315-1.955343glycosyl transferase family protein
SaurJH9_1999314-1.067028cell wall anchor domain-containing protein
SaurJH9_2000314-0.494402hypothetical protein
SaurJH9_20013160.163123formate--tetrahydrofolate ligase
SaurJH9_2002217-0.476584acetyl-CoA synthetase
SaurJH9_20030161.129188hypothetical protein
SaurJH9_20041161.106760histone deacetylase superfamily protein
SaurJH9_20050132.025945catabolite control protein A
SaurJH9_20060131.979221bifunctional 3-deoxy-7-phosphoheptulonate
SaurJH9_20070132.022824hypothetical protein
SaurJH9_20080132.082860hypothetical protein
SaurJH9_20092132.298600UDP-N-acetylmuramate--L-alanine ligase
SaurJH9_20101142.137805cell division protein FtsK
SaurJH9_2011217-0.156047tRNA-binding domain-containing protein
SaurJH9_2012217-0.125157hypothetical protein
SaurJH9_2013321-0.342596thioredoxin domain-containing protein
SaurJH9_2014522-0.551578glutamyl aminopeptidase
SaurJH9_2015218-0.577033hypothetical protein
SaurJH9_20160150.483646beta-lactamase domain-containing protein
SaurJH9_2017116-0.171734tRNA (guanine-N(7)-)-methyltransferase
SaurJH9_2018016-0.260041hypothetical protein
SaurJH9_2019-115-0.111560D-alanine aminotransferase
SaurJH9_2020-115-0.205500dipeptidase PepV
SaurJH9_2021-119-0.447954hypothetical protein
SaurJH9_2022120-1.095772pseudouridine synthase
SaurJH9_2023223-0.746380polysaccharide biosynthesis protein
SaurJH9_20245280.001668hypothetical protein
SaurJH9_2025733-0.958159hypothetical protein
SaurJH9_2026633-0.868869cell wall anchor domain-containing protein
SaurJH9_2027530-0.803143hypothetical protein
SaurJH9_20282290.379665rhodanese domain-containing protein
SaurJH9_20291310.799539leucyl-tRNA synthetase
SaurJH9_20300311.125958major facilitator transporter
SaurJH9_20310312.221287hypothetical protein
SaurJH9_20320302.680143hypothetical protein
SaurJH9_20330281.709436accessory regulator A-like protein
SaurJH9_20340261.572850alpha/beta hydrolase
SaurJH9_20351221.164430proline dehydrogenase
SaurJH9_2036320-0.7513276,7-dimethyl-8-ribityllumazine synthase
SaurJH9_2037319-1.061937riboflavin biosynthesis protein
SaurJH9_2038420-0.929007riboflavin synthase subunit alpha
SaurJH9_2039518-1.210677riboflavin biosynthesis protein RibD
SaurJH9_2041619-1.543229hypothetical protein
SaurJH9_2042721-2.047632ArsR family transcriptional regulator
SaurJH9_2043324-1.478034arsenical pump membrane protein
SaurJH9_2044324-1.648614mannosyl-glycoprotein
SaurJH9_2045120-0.911879hypothetical protein
SaurJH9_2046122-0.742537ECF subfamily RNA polymerase sigma-24 factor
SaurJH9_2047221-1.165019hypothetical protein
SaurJH9_2048219-1.555954hypothetical protein
SaurJH9_2049419-1.195829abortive infection protein
SaurJH9_2050620-2.099894translaldolase
SaurJH9_2051922-2.859255hypothetical protein
SaurJH9_2052922-2.960130hypothetical protein
SaurJH9_2053824-3.386896camphor resistance protein CrcB
SaurJH9_2054923-4.969006camphor resistance CrcB protein
SaurJH9_2055722-4.969208hypothetical protein
SaurJH9_2056318-3.6987982,5-didehydrogluconate reductase
SaurJH9_2057115-3.659016hypothetical protein
SaurJH9_2058114-3.757018S-adenosylmethionine synthetase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2008CHANLCOLICIN408e-05 Channel forming colicin signature.
		>CHANLCOLICIN#Channel forming colicin signature.

Length = 522

Score = 39.7 bits (92), Expect = 8e-05
Identities = 41/217 (18%), Positives = 79/217 (36%), Gaps = 20/217 (9%)

Query: 588 AIEAARESTKEQLRDYVKTSDYKTDKDGIVERLDTA-EAERTTLKGEIKDKVTLNEYRNG 646
A+E A++ + VK + + A +AE TL G+ NE
Sbjct: 190 AVEIAQKKLSAAQSEVVKMDGEIKTLNSRLSSSIHARDAEMKTLAGK------RNELAQA 243

Query: 647 LEEQKQYTD--DQLSDLSNNPEIKASIEQANQEAQEALKSYIDAQDNLKEKESQAYADGK 704
+ K+ + +LS +N+P +A + A K + Q + E++
Sbjct: 244 SAKYKELDELVKKLSPRANDPLQNRPFFEATRRRVGAGKIREEKQKQVTASETRINRINA 303

Query: 705 ISEEEQRAIQDAQAKLEEAKQNAELKARNAEKKANAYTDNKVKESTDAQR---RTLT-RY 760
+ Q+AI N +K N ++++K++ DA +TLT +Y
Sbjct: 304 DITQIQKAISQVSNNRNAGIARVHEAEENLKKAQNNLLNSQIKDAVDATVSFYQTLTEKY 363

Query: 761 GSQIIQNGKEI-------KLRTTKEEFNATNRTLSNI 790
G + + +E+ K+ E A + +
Sbjct: 364 GEKYSKMAQELADKSKGKKIGNVNEALAAFEKYKDVL 400


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2010TYPE4SSCAGA360.001 Type IV secretion system CagA exotoxin signature.
		>TYPE4SSCAGA#Type IV secretion system CagA exotoxin signature.

Length = 1147

Score = 36.2 bits (83), Expect = 0.001
Identities = 86/433 (19%), Positives = 168/433 (38%), Gaps = 54/433 (12%)

Query: 16 AANLNRSFA---------EIKRNFKTLNSDLKLTGNNFKYTEKSTHSYKQRIKELDGTIT 66
N N++ A E+K+ K L L+ + K EK S +++
Sbjct: 588 TLNFNKAVADAKNTGNYDEVKKAQKDLEKSLRKREHLEKEVEKKLESKSGNKNKMEAKAQ 647

Query: 67 GYKKNVDDLAKQYGKVSQEQGENSAEAQKLRQEYNKQANELNFLEKELEKTTTEFEEFKK 126
+ D++ K + A AQ L+ + +++L + K L+ F+EFK
Sbjct: 648 ANSQK-DEIFALINKEANRDARAIAYAQNLKGIKRELSDKLENVNKNLKDFDKSFDEFKN 706

Query: 127 AQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGLMIGVTAPVLGIAAASGKAF 186
+ + K + +++ + +G + I K V + AA +
Sbjct: 707 GK-------NKDFSKAEETLKALKGSVKDLGINPEWISK---------VENLNAALNEFK 750

Query: 187 AEVDKGLDTVTQATGATGGELKKLQNSFKDVYGN--FPEDAETVGGVLGEVNTRLGFTGK 244
+K VTQA L+NS KDV N + + + + F+
Sbjct: 751 NGKNKDFSKVTQAK-------SDLENSVKDVIINQKVTDKVDNLNQAVSVAKATGDFSR- 802

Query: 245 ELESATESFLKFSHITGSDGVQAVQLITRAMGDAGIEADEYQSVLDMVAKAAQASGISVD 304
+E A FS + Q + + +A +++ YQSV + V +G+S
Sbjct: 803 -VEQALADLKNFSKEQLAQQAQKNESL-----NARKKSEIYQSVKNGVNGTLVGNGLS-Q 855

Query: 305 TLADSITKYGAPMRAMGFEMKESIALFSQWEKSGVNTEIAFSGLKKAISNWGKAGKDP-- 362
A +++K + ++ E+ + F+ +G+ E ++ + K + + ++P
Sbjct: 856 AEATTLSKNFSDIKK---ELNAKLGNFNNNNNNGLKNEPIYAKVNKKKAGQAASLEEPIY 912

Query: 363 REEFKKTLAEIERTPDIASATSLAIEA--FGAKAGPDLADAIKGGRFSYQEFLKTIEDSQ 420
+ KK A+I+R IAS + +A F K + D K G QE + I++
Sbjct: 913 AQVAKKVNAKIDRLNQIASGLGVVGQAAGFPLKRHDKVDDLSKVGLSRNQELAQKIDN-- 970

Query: 421 GTVNQTFKDSESG 433
+NQ ++++G
Sbjct: 971 --LNQAVSEAKAG 981


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2035PF06580270.028 Sensor histidine kinase
		>PF06580#Sensor histidine kinase

Length = 349

Score = 26.8 bits (59), Expect = 0.028
Identities = 9/36 (25%), Positives = 18/36 (50%), Gaps = 5/36 (13%)

Query: 67 ERLEQARLERKLERKRKREAELR----RKKPH-LFN 97
+ +QA +++ +EA+L + PH +FN
Sbjct: 142 KNYKQAEIDQWKMASMAQEAQLMALKAQINPHFMFN 177


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2042CHANLCOLICIN340.002 Channel forming colicin signature.
		>CHANLCOLICIN#Channel forming colicin signature.

Length = 522

Score = 33.9 bits (77), Expect = 0.002
Identities = 47/240 (19%), Positives = 94/240 (39%), Gaps = 19/240 (7%)

Query: 242 KQEIEQLENERIDIQNGAEEINLRNQLADKQSELKRIEANNSASNENKIHALTNELHVEN 301
++EIE+ + E AE +LA E K +E K+ A +E+ +
Sbjct: 157 RKEIEREKAETERQLKLAEAEE--KRLAALSEEAKAVEIAQK-----KLSAAQSEVVKMD 209

Query: 302 GTVANLKTRLKQNKQQITHEENRR-NQLLENHKGLKS--DLEKAKNQKFEYLDDNVCSCC 358
G + L +RL + E + E + +L++ + +D + +
Sbjct: 210 GEIKTLNSRLSSSIHARDAEMKTLAGKRNELAQASAKYKELDELVKKLSPRANDPLQNRP 269

Query: 359 GQQLPAEQVSEVREKALQKFNANKSKELETIQTSINHIISEGKKIKPIIEKLEDDNNNLQ 418
+ +V K K K++ +T IN I ++ +I+ I ++ ++ N
Sbjct: 270 FFEATRRRVGA------GKIREEKQKQVTASETRINRINADITQIQKAISQVSNNRNAGI 323

Query: 419 IKINEAEERSARIQNKINKLKITHVDVTQTDEYKAVMLEINEINQKRSNIRKTIQDKVSG 478
+++EAEE + QN + +I Y+ + + E K S + + + DK G
Sbjct: 324 ARVHEAEENLKKAQNNLLNSQIKDAVDATVSFYQTLTEKYGE---KYSKMAQELADKSKG 380


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2051LPSBIOSNTHSS240.039 Lipopolysaccharide core biosynthesis protein signat...
		>LPSBIOSNTHSS#Lipopolysaccharide core biosynthesis protein

signature.
Length = 166

Score = 24.4 bits (53), Expect = 0.039
Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 35 EEIETFFLDPTKTYVFVGS 53
++ET FL + Y F+ S
Sbjct: 109 SDLETVFLTTSTEYSFLSS 127


27SaurJH9_2187SaurJH9_2198Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_21877141.222715hypothetical protein
SaurJH9_21887131.171656aspartyl/glutamyl-tRNA amidotransferase subunit
SaurJH9_21898120.723533aspartyl/glutamyl-tRNA amidotransferase subunit
SaurJH9_21909150.843630aspartyl/glutamyl-tRNA amidotransferase subunit
SaurJH9_21918150.593556high affinity proline permease
SaurJH9_21927150.868135CamS sex pheromone cAM373 family protein
SaurJH9_2193113-0.221394hypothetical protein
SaurJH9_2194215-1.043964NAD-dependent DNA ligase
SaurJH9_2195315-1.142184ATP-dependent DNA helicase PcrA
SaurJH9_2196414-1.363001geranylgeranylglyceryl phosphate synthase
SaurJH9_2197213-1.444178hypothetical protein
SaurJH9_2198214-2.086970adenylosuccinate lyase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2192IGASERPTASE456e-06 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 44.7 bits (105), Expect = 6e-06
Identities = 57/316 (18%), Positives = 103/316 (32%), Gaps = 20/316 (6%)

Query: 2122 PQANNNSSADASTNSPTMDNDVTSKPEVESTNNG---TTDKPVTETDNATPAESTTNN-- 2176
P+ + +TN T +N P V S N + PV ATP+E+T
Sbjct: 983 PEVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPPAPATPSETTETVAE 1042

Query: 2177 ----NSTTTATNENAPTGSTATAPTTASTEAASSADSKDNASVNDSKQNAEVNNSAESQS 2232
S T NE T +TA A ++ + V S + + E++
Sbjct: 1043 NSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKETQTTETKE 1102

Query: 2233 TNGKVAQPKS--ENKAKAEKDGRDSTNQSMVESTTETLPSADITEPNVPSNTSKDKEEST 2290
T + K+ E + E S E + P A+ N P+ K+ + T
Sbjct: 1103 TATVEKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPARENDPTVNIKEPQSQT 1162

Query: 2291 TNQTDAGQLKSETNVASNEADKSPSKADT----EVSNKPSTSASSEAKDKMTSTNVSQKD 2346
D Q ET+ + + +T + + +T A+++ S+N +
Sbjct: 1163 NTTADTEQPAKETSSNVEQPVTESTTVNTGNSVVENPENTTPATTQPTVNSESSNKPKNR 1222

Query: 2347 DTATADTNDTQKSVGPVANNKAKDMQTNDTQKSVGSAANNKATQNDGANASPATVSNG-S 2405
+ + ++N + S N + A A ++ G +
Sbjct: 1223 HRRSVRSVPHNVEPATTSSNDRS----TVALCDLTSTNTNAVLSDARAKAQFVALNVGKA 1278

Query: 2406 HSMHQDMLNVTKPEEN 2421
S H L + +
Sbjct: 1279 VSQHISQLEMNNEGQY 1294



Score = 42.0 bits (98), Expect = 4e-05
Identities = 47/318 (14%), Positives = 104/318 (32%), Gaps = 9/318 (2%)

Query: 1073 NNGSTTEEKEAAKQQVQTEKTAADAAIDAAHSNVEVEAAKNAEIAKI-EAIQPATTTKDN 1131
NG +++ QT T + ++V + N EIA++ EA P
Sbjct: 974 VNGRYDLYNPEVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPPAPATP 1033

Query: 1132 AKQAIATKANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTT 1191
++ N ++ ++T + ++ A +A SN++A N+V Q+ +
Sbjct: 1034 SETTETVAENSKQE--SKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSE 1091

Query: 1192 GETSIDQVTPTVNKKATARNEITAILNNKLQEIQATPDATDEEKQAADAEANTENGKANQ 1251
+ T T K TA E + ++ Q P T + + +
Sbjct: 1092 TKE-----TQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPA 1146

Query: 1252 AISAATTNAQVDEAKANAEAAINAVTPKVVKKQAAKDEIDQLQATQTNVINNDQNATNEE 1311
+ T N + +++ N A + T +V+ N +N T
Sbjct: 1147 RENDPTVNIKEPQSQTNTTADTEQPAKETSSNVEQPVTESTTVNTGNSVVENPENTTPAT 1206

Query: 1312 KEAAIQQLATAVTDAKNNITAATDDNGVDTAKDAGKNSIQSTQPATAVKSNAKNEVDQAV 1371
+ + ++ ++ + + + V+ A + + + +N + A
Sbjct: 1207 TQPTVNSESSNKPKNRHRRSVRSVPHNVEPATTSSNDR-STVALCDLTSTNTNAVLSDAR 1265

Query: 1372 TTQNQAIDNTTGATTEEK 1389
N A ++
Sbjct: 1266 AKAQFVALNVGKAVSQHI 1283



Score = 33.9 bits (77), Expect = 0.010
Identities = 61/312 (19%), Positives = 105/312 (33%), Gaps = 18/312 (5%)

Query: 1021 DIDNATANTDVDNAKTTNEATIAAITPDANVKPAAKQAIADKVQAQETAIDANNGSTTEE 1080
D+ N TTN T I D P+ + IA +A S T E
Sbjct: 979 DLYNPEVEKRNQTVDTTNITTPNNIQADVPSVPSNNEEIARVDEAPVPPPAPATPSETTE 1038

Query: 1081 K--EAAKQQVQTEKTAADAAIDAAHSNVEVEAAKNAEIAKIEAIQPATTTKDNAKQAIAT 1138
E +KQ+ +T + A + N EV + + A T + Q+ +
Sbjct: 1039 TVAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNV-------KANTQTNEVAQSGSE 1091

Query: 1139 KANERKTAIAQTQDITAEEIAAANADVDNAVTQANSNIEAANSQNDVDQAKTTGETSIDQ 1198
+ T +T + EE A + V + S + Q++ Q + D
Sbjct: 1092 TKETQTTETKETATVEKEEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPAREND- 1150

Query: 1199 VTPTVN-KKATARNEITAILNNKLQEIQATPDATDEEKQAADAEANTENGKANQAISAAT 1257
PTVN K+ ++ TA +E + + E + + N + AT
Sbjct: 1151 --PTVNIKEPQSQTNTTADTEQPAKETSSNVEQPVTESTTVNTGNSVVENPENT--TPAT 1206

Query: 1258 TNAQVDEAKANAEAAINAVTPKVVKKQ---AAKDEIDQLQATQTNVINNDQNATNEEKEA 1314
T V+ +N + + + V A D+ ++ + + NA + A
Sbjct: 1207 TQPTVNSESSNKPKNRHRRSVRSVPHNVEPATTSSNDRSTVALCDLTSTNTNAVLSDARA 1266

Query: 1315 AIQQLATAVTDA 1326
Q +A V A
Sbjct: 1267 KAQFVALNVGKA 1278



Score = 33.9 bits (77), Expect = 0.012
Identities = 45/305 (14%), Positives = 93/305 (30%), Gaps = 14/305 (4%)

Query: 804 KNEEIFKIENITDSTQTKMDAYKEVRQAATARKAQNATVSNATDEEVAEANAAVDAAQTE 863
E K E+ T + + A++A++ +N EVA++ + QT
Sbjct: 1039 TVAENSKQESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKETQTT 1098

Query: 864 GLHDIQVVKSQQEVADTKAKVLDKINAIQTQAKVKPAADTEVENAYNTRKQEIQNSNAST 923
+ V+ +++ A + + ++ + +Q K V+ ++ N
Sbjct: 1099 ETKETATVEKEEK-AKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEPARENDPTVNIKE 1157

Query: 924 TEEKEAAYTELDAKKQEARTNLDAANTNSDVTTAKDNGIAAINQVQAATTKKSDAKAEIA 983
+ + + + +E +N++ T T N + + T + +E +
Sbjct: 1158 PQSQTNTTADTEQPAKETSSNVEQPVT-ESTTVNTGNSVVENPENTTPATTQPTVNSESS 1216

Query: 984 QKASERKTAIEAMNDSTTEEQQAAKDKVDQAVVTANADIDNATANTDVDNAKTTNEATIA 1043
K R + E V + N A AK A
Sbjct: 1217 NKPKNR-HRRSVRSVPHNVEPATTSSNDRSTVALCDLTSTNTNAVLSDARAKAQFVA--- 1272

Query: 1044 AITPDANVKPAAKQAIADKV---QAQETAIDANNGSTTEEKEAAKQQVQTEKTAADAAID 1100
NV A Q I+ + Q +N + ++ ++ T D
Sbjct: 1273 -----LNVGKAVSQHISQLEMNNEGQYNVWVSNTSMNKNYSSSQYRRFSSKSTQTQLGWD 1327

Query: 1101 AAHSN 1105
SN
Sbjct: 1328 QTISN 1332



Score = 32.3 bits (73), Expect = 0.034
Identities = 32/210 (15%), Positives = 63/210 (30%), Gaps = 4/210 (1%)

Query: 34 TTASAAEQNQPAQNQPAQPADANTQPNANAGAQANPAAQPANQGGQANPAGGAAQPAGQG 93
T + +Q P Q QP A + +P Q N QPA +
Sbjct: 1116 TEKTQEVPKVTSQVSPKQEQSETVQPQAEPARENDPTVNIKEPQSQTNTTADTEQPAKET 1175

Query: 94 NQADPNNAAQAQPGNQ--AAPANQAGQGNNQATPNNNATPANQTQPANAPA-AAQPAAPV 150
+ ++ N + N P N+ +N+ + + + + P
Sbjct: 1176 SSNVEQPVTESTTVNTGNSVVENPENTTPATTQPTVNSESSNKPKNRHRRSVRSVPHNVE 1235

Query: 151 AANAQTQDPNASNTGE-GSINTTLTFDDPAISTDENRQDPTVTVTDKVNGYSLINNGKIG 209
A + D + + S NT D + V+ ++ + N G+
Sbjct: 1236 PATTSSNDRSTVALCDLTSTNTNAVLSDARAKAQFVALNVGKAVSQHISQLEMNNEGQYN 1295

Query: 210 FVNSELRRSDMFDKNNPQNYQAKGNVAALG 239
S + + + + + +K LG
Sbjct: 1296 VWVSNTSMNKNYSSSQYRRFSSKSTQTQLG 1325


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2198TCRTETB1443e-40 Tetracycline resistance protein TetB signature.
		>TCRTETB#Tetracycline resistance protein TetB signature.

Length = 458

Score = 144 bits (364), Expect = 3e-40
Identities = 98/416 (23%), Positives = 194/416 (46%), Gaps = 14/416 (3%)

Query: 8 TTRRRNFIVAVMLISAFVAILNQTLLNTALPSIMRELNINESTSQWLVTGFMLVNGVMIP 67
+ R N I+ + I +F ++LN+ +LN +LP I + N +++ W+ T FML +
Sbjct: 8 SNLRHNQILIWLCILSFFSVLNEMVLNVSLPDIANDFNKPPASTNWVNTAFMLTFSIGTA 67

Query: 68 LTAYLMDRIKTRPLYLAAMGTFLLGSIVAALAPN-FGVLMLARVIQAMGAGVLMPLMQFT 126
+ L D++ + L L + GS++ + + F +L++AR IQ GA L+
Sbjct: 68 VYGKLSDQLGIKRLLLFGIIINCFGSVIGFVGHSFFSLLIMARFIQGAGAAAFPALVMVV 127

Query: 127 LFTLFSKEHRGFAMGLAGLVIQFAPAIGPTVTGLIIDQASWRVPFIIIVGIALVAFVFGL 186
+ KE+RG A GL G ++ +GP + G+I W +++++ + + V L
Sbjct: 128 VARYIPKENRGKAFGLIGSIVAMGEGVGPAIGGMIAHYIHW--SYLLLIPMITIITVPFL 185

Query: 187 VSISSYNEVKYTKLDKRSVMYSTIGFGLMLYAFSSAGDLGFTSPIVIGALIISMVIIYLF 246
+ + D + ++ ++G + FT+ I LI+S++ +F
Sbjct: 186 MKLLKKEVRIKGHFDIKGIILMSVGIVFFML---------FTTSYSISFLIVSVLSFLIF 236

Query: 247 IRRQFNITNVLLNLRVFKNRTFALCTISSMIIMMSMVGPALLIPLYVQNSLSLSALLSGL 306
++ +T+ ++ + KN F + + II ++ G ++P +++ LS G
Sbjct: 237 VKHIRKVTDPFVDPGLGKNIPFMIGVLCGGIIFGTVAGFVSMVPYMMKDVHQLSTAEIGS 296

Query: 307 VIM-PGAIINGIMSVFTGKFYDKYGPRPLIYTGFTILTITTIMLCFLHTDTSYTYLIVVY 365
VI+ PG + I G D+ GP ++ G T L+++ + FL TS+ I++
Sbjct: 297 VIIFPGTMSVIIFGYIGGILVDRRGPLYVLNIGVTFLSVSFLTASFLLETTSWFMTIIIV 356

Query: 366 AIRMFSVSLLMMPINTTGINSLRNEEISHGTAIMNFGRVMAGSLGTALMVTLMSFG 421
+ S I+T +SL+ +E G +++NF ++ G A++ L+S
Sbjct: 357 FVLGGL-SFTKTVISTIVSSSLKQQEAGAGMSLLNFTSFLSEGTGIAIVGGLLSIP 411


28SaurJH9_2235SaurJH9_2274Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_2235014-3.951599MAP domain-containing protein
SaurJH9_2236014-4.114728hypothetical protein
SaurJH9_2237316-5.333638hypothetical protein
SaurJH9_2238621-6.890920hypothetical protein
SaurJH9_2239119-5.775839hypothetical protein
SaurJH9_2240016-3.073410hypothetical protein
SaurJH9_2242-113-1.200518hypothetical protein
SaurJH9_2243-110-0.721522chemotaxis-inhibiting protein CHIPS
SaurJH9_2244-1111.306575chemotaxis-inhibiting protein CHIPS
SaurJH9_2245-2110.973612SH3 type 3 domain-containing protein
SaurJH9_2246-2100.637504kinase
SaurJH9_2247-1130.945332hypothetical protein
SaurJH9_22482172.000758CHAP domain-containing protein
SaurJH9_22494252.140117phage phi LC3 family holin
SaurJH9_22509362.240401hypothetical protein
SaurJH9_22516271.976329hypothetical protein
SaurJH9_22522232.111148hypothetical protein
SaurJH9_22533211.973897hypothetical protein
SaurJH9_22544201.532650phage minor structural protein
SaurJH9_22553222.596484hypothetical protein
SaurJH9_22562222.710964TP901 family phage tail tape measure protein
SaurJH9_22576272.660845hypothetical protein
SaurJH9_22588373.217209hypothetical protein
SaurJH9_22598393.030617hypothetical protein
SaurJH9_22608412.595288phi13 family phage major tail protein
SaurJH9_22618401.283104hypothetical protein
SaurJH9_22628442.128472hypothetical protein
SaurJH9_226310431.580520phage head-tail adaptor
SaurJH9_226411421.715686hypothetical protein
SaurJH9_226512412.464080hypothetical protein
SaurJH9_226610423.524130hypothetical protein
SaurJH9_226711414.032616peptidase S14, ClpP
SaurJH9_226811383.481507HK97 family phage portal protein
SaurJH9_22699405.124901phage terminase
SaurJH9_22708415.104450hypothetical protein
SaurJH9_22717424.898862HNH endonuclease
SaurJH9_22727394.784416RinA family phage transcriptional regulator
SaurJH9_22736384.827535hypothetical protein
SaurJH9_22744333.771675hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2257SECYTRNLCASE457e-162 Preprotein translocase SecY subunit signature.
		>SECYTRNLCASE#Preprotein translocase SecY subunit signature.

Length = 437

Score = 457 bits (1178), Expect = e-162
Identities = 163/441 (36%), Positives = 271/441 (61%), Gaps = 20/441 (4%)

Query: 1 MIQTLVNFFRTKEVRNKIFFTLAMLVIFKIGTYIPAPGVNPAA----FDNPQGSQGATEL 56
M+ FRT ++R K+ FTLA++V++++GT+IP PGV+ G+QG L
Sbjct: 1 MLTAFARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNVQQCVREASGNQGLFGL 60

Query: 57 LNTFGGGALKRFSIFAMGIVPYITASIVMQLLQMDIVPKFSEWAKQGEVGRRKLNNVTRY 116
+N F GGAL + +IFA+GI+PYITASI++QLL + ++P+ K+G+ G K+ TRY
Sbjct: 61 VNMFSGGALLQITIFALGIMPYITASIILQLLTV-VIPRLEALKKEGQAGTAKITQYTRY 119

Query: 117 LAISLAFIQSIGMAFQFNN-------YLKGALIINQSIMSYLLIALVLTAGTAFLIWLGD 169
L ++LA +Q G+ + + G ++ +QSI + + + + +TAGT ++WLG+
Sbjct: 120 LTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWLGE 179

Query: 170 QITQFGVGNGISIIIFAGILSTLPASLIQFGQTAFVGQEDTSLAWLKVLGLLVSLILLTV 229
IT G+GNG+SI++F I +T P++L + + W++ ++ +++
Sbjct: 180 LITDRGIGNGMSILMFISIAATFPSALWAIKKQGTLAG-----GWIEFGTVIAVGLIMVA 234

Query: 230 GAIYVLEAVRKIPIQYAKKQTAQRL-GSQATYLPLKVNSAGVIPVIFAMAFFLLPRTLTL 288
++V +A R+IP+QYAK+ +R G +TY+PLKVN AGVIPVIFA + +P +
Sbjct: 235 LVVFVEQAQRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQ 294

Query: 289 FYPDKEWAQNIA--NAANPSSNVGMVVYIVLIILFTYFYAFVQVNPEKMADNLKKQGSYV 346
F ++ N + +V Y +LI+ F +FY + NPE++ADN+KK G ++
Sbjct: 295 FAGGNSGWKSWVEQNLTKGDHPIYIVTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFI 354

Query: 347 PGIRPGEQTKKYITKVLYRLTFVGSIFLAVISILPILATKFMGLPQSIQIGGTSLLIVIG 406
PGIR G T +Y++ VL R+T+ GS++L +I+++P +A G Q+ GGTS+LI++G
Sbjct: 355 PGIRAGRPTAEYLSYVLNRITWPGSLYLGLIALVPTMALVGFGASQNFPFGGTSILIIVG 414

Query: 407 VAIETMKSLEAQVSQKEYKGF 427
V +ET+K +E+Q+ Q+ Y+GF
Sbjct: 415 VGLETVKQIESQLQQRNYEGF 435


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2266PF06872260.028 EspG protein
		>PF06872#EspG protein

Length = 398

Score = 26.2 bits (57), Expect = 0.028
Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 73 PKTNEPTRVGYKFVDGKKVRIAKKSGEEIKS 103
P NE RV KF DG +RI+ + E I++
Sbjct: 87 PAHNELGRVYAKFSDGSSLRISVTNSELIEA 117


29SaurJH9_2673SaurJH9_2678Y        Y        NPathogenicity Island (biased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_26736132.191219malate:quinone oxidoreductase
SaurJH9_26748142.630680L-lactate transport
SaurJH9_26759132.716655hypothetical protein
SaurJH9_267610142.662852hypothetical protein
SaurJH9_267711152.961891hypothetical protein
SaurJH9_267812163.901126N-acetyltransferase GCN5
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2673SECA6560.0 SecA protein signature.
		>SECA#SecA protein signature.

Length = 901

Score = 656 bits (1695), Expect = 0.0
Identities = 287/835 (34%), Positives = 450/835 (53%), Gaps = 68/835 (8%)

Query: 10 NELRLKSIRKIVKRINTWSDEVKSYSDDALKQKTIEFKERLASGVDTLDTLLPEAYAVAR 69
N+ L+ +RK+V IN E++ SD+ LK KT EF+ RL G + L+ L+PEA+AV R
Sbjct: 14 NDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKG-EVLENLIPEAFAVVR 72

Query: 70 EASWRVLGMYPKEVQLIGAIVLHEGNIAEMQTGEGKTLTATMPLYLNALSGKGTYLITTN 129
EAS RV GM +VQL+G +VL+E IAEM+TGEGKTLTAT+P YLNAL+GKG +++T N
Sbjct: 73 EASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVN 132

Query: 130 DYLAKRDFEEMQPLYEWLGLTASLGFVDIVDYEYQKGEKRNIYEHDIIYTTNGRLGFDYL 189
DYLA+RD E +PL+E+LGLT V I KR Y DI Y TN GFDYL
Sbjct: 133 DYLAQRDAENNRPLFEFLGLT-----VGINLPGMPAPAKREAYAADITYGTNNEYGFDYL 187

Query: 190 IDNLADSAEGKFLPQLNYGIIDEVDSIILDAAQTPLVISGAPRLQSNLFHIVKEFVDTLI 249
DN+A S E + +L+Y ++DEVDSI++D A+TPL+ISG S ++ V + + LI
Sbjct: 188 RDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHLI 247

Query: 250 E-----------DVHFKMKKTKKEIWLLNQGIEAAQSYFNV-------EDLYSEQAMVLV 291
+ HF + + +++ L +G+ + E LYS ++L+
Sbjct: 248 RQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLM 307

Query: 292 RNINLALRAQYLFESNVDYFVYNGDIVLIDRITGRMLPGTKLQAGLHQAIEAKEGMEVST 351
++ ALRA LF +VDY V +G+++++D TGR + G + GLHQA+EAKEG+++
Sbjct: 308 HHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQN 367

Query: 352 DKSVMATITFQNLFKLFESFSGMTATGKLGESEFFDLYSKIVVQAPTDKAIQRIDEPDKV 411
+ +A+ITFQN F+L+E +GMT T EF +Y V PT++ + R D PD V
Sbjct: 368 ENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLV 427

Query: 412 FRSVDEKNIAMIHDIVELHETGRPVLLITRTAEAAEYFSKVLFQMDIPNNLLIAQNVAKE 471
+ + EK A+I DI E G+PVL+ T + E +E S L + I +N+L A+ A E
Sbjct: 428 YMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANE 487

Query: 472 AQMIAEAGQIGSMTVATSMAGRGTDIKLG-----------------------------EG 502
A ++A+AG ++T+AT+MAGRGTDI LG +
Sbjct: 488 AAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDA 547

Query: 503 VEALGGLAVIIHEHMENSRVDRQLRGRSGRQGDPGSSCIYISLDDYLVKRWSDSNLAENN 562
V GGL +I E E+ R+D QLRGRSGRQGD GSS Y+S++D L++ ++ ++
Sbjct: 548 VLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMM 607

Query: 563 QLYSLDAQRLSQSNLFNRKVKQIVVKAQRISEEQGVKAREMANEFEKSISIQRDLVYEER 622
+ + + + + AQR E + R+ E++ + QR +Y +R
Sbjct: 608 RKLGMKPGEAIEHPWVTKAIA----NAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQR 663

Query: 623 NRVLEIDDAENRDFKALAKDVFEMFVNEE---KVLTKSRVVEYIYQNLSFQFNKDVACVN 679
N +L++ D ++ +DVF+ ++ + L + + + + L F+ D+
Sbjct: 664 NELLDVSDVSET-INSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAE 722

Query: 680 FKDKQAVVT------FLLEQFEKQLALNRKNMQSAYYYNIFVQKVFLKAIDSCWLEQVDY 733
+ DK+ + +L Q + ++ + A F + V L+ +DS W E +
Sbjct: 723 WLDKEPELHEETLRERILAQSIEVYQ-RKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAA 781

Query: 734 LQQLKASVNQRQNGQRNAIFEYHRVALDSFEVMTRNIKKRMVKNICQSMITFDKE 788
+ L+ ++ R Q++ EY R + F M ++K ++ + + + +E
Sbjct: 782 MDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEE 836


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2677SECYTRNLCASE1304e-36 Preprotein translocase SecY subunit signature.
		>SECYTRNLCASE#Preprotein translocase SecY subunit signature.

Length = 437

Score = 130 bits (329), Expect = 4e-36
Identities = 93/440 (21%), Positives = 181/440 (41%), Gaps = 52/440 (11%)

Query: 4 LLQQYEYKIIYKRMLYTCFILFIYILGTNISI--VSYNDMQ------VKHESFFKIAISN 55
+ + + K++L+T I+ +Y +GT+I I V Y ++Q ++ F +
Sbjct: 5 FARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNVQQCVREASGNQGLFGLVNMF 64

Query: 56 MGGDVNTLNIFTLGLVPWLTSMIILMLISYRNMDKYMKQTSLEKHYKE------------ 103
GG + + IF LG++P++T+ IIL L++ + LE KE
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLT-------VVIPRLEALKKEGQAGTAKITQYT 117

Query: 104 RILTLILSVIQSYFVIHEYVSKERVHQDN-------------IYLTILILVTGTMLLVWL 150
R LT+ L+++Q ++ S + + ++ + GT +++WL
Sbjct: 118 RYLTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWL 177

Query: 151 ADKNSRYGIAGPMPIVMVSIIKSMMHQKMEYI------DASHIVIALLIILVIITLFILL 204
+ + GI M I+M I + + I I +I + +I + +++
Sbjct: 178 GELITDRGIGNGMSILMFISIAATFPSALWAIKKQGTLAGGWIEFGTVIAVGLIMVALVV 237

Query: 205 FIELVEVRIPYI----DLMNVSATNMKSYLSWKVNPAGSITLMMSISAFVFLKSGIHFIL 260
F+E + RIP + S +Y+ KVN AG I ++ + S F
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQFAG 297

Query: 261 SMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRFLINTKQKSKDFLKSGNYFSGV 320
+ + D P+ I Y ++ + +F N ++ + + K G + G+
Sbjct: 298 GNSGWKSWVEQNLTKGDHPIYIVTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGI 357

Query: 321 KPGKDTERYLNYQARRVCWFGSALVTVIIGIPLYFTLFVPHLSTEIYFS-VQLIVLVYIS 379
+ G+ T YL+Y R+ W GS + +I +P L S F ++++V +
Sbjct: 358 RAGRPTAEYLSYVLNRITWPGSLYLGLIALVP-TMALVGFGASQNFPFGGTSILIIVGVG 416

Query: 380 INIAETIRTYLYFDKYKPFL 399
+ + I + L Y+ FL
Sbjct: 417 LETVKQIESQLQQRNYEGFL 436


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2678ICENUCLEATIN553e-09 Ice nucleation protein signature.
		>ICENUCLEATIN#Ice nucleation protein signature.

Length = 1258

Score = 55.1 bits (132), Expect = 3e-09
Identities = 237/1070 (22%), Positives = 425/1070 (39%), Gaps = 12/1070 (1%)

Query: 1098 SDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTSNSERTSTSVSD 1157
+ + ++ + S S + + T +T S ST ++ +
Sbjct: 106 LHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQTIEIATYG 165

Query: 1158 STSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQSASAFLSESLSE 1217
ST T +S I+ ST + + + S + ++ST + S ES
Sbjct: 166 STLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEESSQM 225

Query: 1218 STSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSE 1277
+ ST + S + S T+ S+ + ST + S+ T+ ST T +
Sbjct: 226 AGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKG 285

Query: 1278 SVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTSL 1337
S T+ ST T+ ++S+ ++ S T+ +S + ST + S + ST
Sbjct: 286 SDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGT 345

Query: 1338 SGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQ 1397
+G S + S+ + DS+ + S T+ S T+ S T+ + S +
Sbjct: 346 AGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYG 405

Query: 1398 SGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQ 1457
S + S + ST T++ S T+ Y S T+ +S+ + S T+ S+
Sbjct: 406 STQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLT 465

Query: 1458 SGSTSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSA 1517
+G ST + GS+ + S ST+ ES+ + S + S + ST + +
Sbjct: 466 AGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNE 525

Query: 1518 SASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSE 1577
S + STS + + S+ + S ++ S+ + ST + ST
Sbjct: 526 SDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGT 585

Query: 1578 SGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSD 1637
+GS S + ST T+ S T+ S + S T+ STS + + S +
Sbjct: 586 AGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYG 645

Query: 1638 SQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVM 1697
S + S T+ ST + SD T+ S ST+G+ S I+ ST T+ S +
Sbjct: 646 STQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGYNSILT 705

Query: 1698 SASISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESS 1757
+ S + S S S S + +DS ++G S + S T+ S +
Sbjct: 706 AGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGSTQTAREQ 765

Query: 1758 SLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTSTSTSGSLSTST 1817
S+ + S S + +DSS ++ S +++ S + S T+ S T+G STST
Sbjct: 766 SVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTTGYGSTST 825

Query: 1818 SLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQ 1877
+ + S ++ S + S T+ S + S + STS + DS ++
Sbjct: 826 AGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDSSLIAGYG 885

Query: 1878 SMSGSESTSTSVSDSQSSSTSNSQFDSMSISASESDSMSTSDSSNISGSNSTSTSLSTSD 1937
S + S + S+ T+ D + S S + S GS T++ ST
Sbjct: 886 STQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQTASFKSTLM 945

Query: 1938 SMSGSVSVSTSTSLSDSISGSTSVSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSIST 1997
+ GS + S + GSTS++ S+ + S + QST T+ GS T+ +
Sbjct: 946 AGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGYGSTQTAEHS 1005

Query: 1998 SMSMSASTSSSQSTSVSTSLSTSDSISDST----------SISISGSQSTVESESTSDST 2047
S + S++ + + S+ ++ S S S ISG +S + + S
Sbjct: 1006 STLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVLTAGYGSSLI 1065

Query: 2048 SISDSESLSTSDSDSTSTSTSDSTSGSTSTSIS--ESLSTSGSGSTSVSDSTSMSESDST 2105
S S + S+ ++ S +G ST I+ S+ +G GS+ + S S +
Sbjct: 1066 SGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNRSMLIAGKGSSQTAGYRSTLISGAD 1125

Query: 2106 SVSMSQDKSDSTSISDSESVSTSTSTSLSTSDSTSTSESLSTSMSGSQSI 2155
SV M+ ++ + +DS + S L+ ++S T+ S +G+ I
Sbjct: 1126 SVQMAGERGKLIAGADSTQTAGDRSKLLAGNNSYLTAGDRSKLTAGNDCI 1175



Score = 53.2 bits (127), Expect = 1e-08
Identities = 176/773 (22%), Positives = 305/773 (39%), Gaps = 2/773 (0%)

Query: 1408 SASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQSGSTSTSASL 1467
+ + +E + S + + T D+T S ST + + +
Sbjct: 106 LHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQTIEIATYG 165

Query: 1468 SGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSASASESDSSST 1527
S SQ I+ S T+ +ST ++ ST +G+ ST + S + +SS
Sbjct: 166 STLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEESSQM 225

Query: 1528 SLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTSESTSE 1587
+ ST M+ S+ + S + S+ + ST + S T+ GST +
Sbjct: 226 AGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKG 285

Query: 1588 SDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQSMSLSTST 1647
SD T+ S + + S+ +G ST T+ +S T+ ST SD + ST T
Sbjct: 286 SDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGT 345

Query: 1648 STSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVMSASISDSQSM 1707
+ S + S + DS+ + GS + SD T+ S + S +
Sbjct: 346 AGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYG 405

Query: 1708 SESVNDSESVSESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSD 1767
S ES + S + GS + GS + + S+ +G S
Sbjct: 406 STQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLT 465

Query: 1768 SVSTSDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGSESVSE 1827
+ S ++ S S S + S + GST T+ GS T+ S + +E
Sbjct: 466 AGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNE 525

Query: 1828 STSLSDSISMSDSTSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGSESTST 1887
S ++ S S + + S + GS + S+ T+ S + S +G ST T
Sbjct: 526 SDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGT 585

Query: 1888 SVSDSQSSSTSNSQFDSMSISASESDSMSTSDSSNISGSNSTSTSLSTSDSMSGSVSVST 1947
+ SDS + S + S+ + ST + S + S ST+ + S ++
Sbjct: 586 AGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYG 645

Query: 1948 STSLSDSISGSTSVSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSISTSMSMSASTSS 2007
ST + S T+ S+ T+ S + S ST+ + S ++ ST + S +
Sbjct: 646 STQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGYNSILT 705

Query: 2008 SQSTSVSTSLSTSDSISDSTSISISGSQSTVESESTSDSTSISDSESLSTSDSDSTSTST 2067
+ S T+ SD S S S +G+ S++ + S T+ S + S T+
Sbjct: 706 AGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGSTQTAREQ 765

Query: 2068 SDSTS--GSTSTSISESLSTSGSGSTSVSDSTSMSESDSTSVSMSQDKSDSTSISDSESV 2125
S T+ GSTST+ ++S +G GST + S+ + S +Q++SD T+ S S
Sbjct: 766 SVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTTGYGSTST 825

Query: 2126 STSTSTSLSTSDSTSTSESLSTSMSGSQSISDSTSTSMSGSTSTSESNSMHPS 2178
+ + S+ ++ ST T+ S +G S + S + S S + + S
Sbjct: 826 AGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDS 878



Score = 53.2 bits (127), Expect = 1e-08
Identities = 233/1050 (22%), Positives = 411/1050 (39%), Gaps = 2/1050 (0%)

Query: 759 TSGSTQQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSES 818
TS + A ++ + S + D+ S S +++
Sbjct: 99 TSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQT 158

Query: 819 NSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNSNSTEKSESLSTSTSDSLRTSTS 878
+++ ST QS + GS + S I+ ST + + ST + T T+
Sbjct: 159 IEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTA 218

Query: 879 LSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTSNAISTSTSLSESASTSDSISIS 938
+S M+ GS S +G ST + DS+ A ST + S+ + S
Sbjct: 219 GEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 278

Query: 939 NSIANSQSASTSKSDSQSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGSLSIAASQSVS 998
A S T+ S T+ + S+ + ST + +ST T+G GS A S
Sbjct: 279 TQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGY--GSTQTAQKGSDL 336

Query: 999 TSTSDSMSTSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSESLSDSQSTSDSDS 1058
T+ S T+ S I+ GS + S + ST + S+ + ST + +
Sbjct: 337 TAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGA 396

Query: 1059 KSLSLSTSQSGSTSTSTSTSASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSAS 1118
S ++ S T+ ST + S + GS + S + S + S
Sbjct: 397 DSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQ 456

Query: 1119 TASSESISQSASTSTSGSVSTSTSLSTSNSERTSTSVSDSTSLSTSESDSISESTSTSDS 1178
TA +S + ST + S + S T+ S + S + ST T+
Sbjct: 457 TAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGY 516

Query: 1179 ISEAISASESTSISLSESNSTSDSESQSASAFLSESLSESTSESTSESVSSSTSESTSLS 1238
S + +ES I+ S ST+ + S + + S + S T+ S+ T+ S
Sbjct: 517 GSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDL 576

Query: 1239 DSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSESVSTSLSMSTSTSLSNSTSLS 1298
+ S T+ S S+ +G S T++ S T+ + S + S+ T+ S ST+ +
Sbjct: 577 TAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGA 636

Query: 1299 TSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTSLSGSTSESESDSTSSSESKSDS 1358
S + S + S+ T+ ST + S T+ GSTS + +DS+ + S
Sbjct: 637 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQ 696

Query: 1359 TSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTS 1418
T+ S+ + GST T+ S S S S + + + S ++ +S+ T+
Sbjct: 697 TAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGY 756

Query: 1419 ESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQSGSTSTSASLSGSESESDSQS 1478
S + + S ST+ + S + S T+ S T+ S ++ S
Sbjct: 757 GSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDL 816

Query: 1479 ISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSASASESDSSSTSLSDSTSASMQ 1538
+ S ST+ + S+ ++ ST +G S T+ S ++ +S T+ STS +
Sbjct: 817 TTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGY 876

Query: 1539 SSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTSESTSESDSTSTSLSDS 1598
S + S + S T+ ST + S T+ GSTS + ES + S
Sbjct: 877 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQ 936

Query: 1599 QSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLS 1658
++ +ST +G S+ T+ S T+ STSM S + ST T+ S T+
Sbjct: 937 TASFKSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGY 996

Query: 1659 DSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVS 1718
S + ST + GS + + + S + S+ S + S ++ SV
Sbjct: 997 GSTQTAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVL 1056

Query: 1719 ESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLS 1778
+ S S S+ + GS +++ + ES+ ++G++SM + S ++
Sbjct: 1057 TAGYGSSLISGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNRSMLIAGKGSSQTAGY 1116

Query: 1779 VSTSLRSSESVSESDSLSDSKSTSGSTSTS 1808
ST + ++SV + + + ST T+
Sbjct: 1117 RSTLISGADSVQMAGERGKLIAGADSTQTA 1146



Score = 52.8 bits (126), Expect = 2e-08
Identities = 229/1007 (22%), Positives = 395/1007 (39%), Gaps = 10/1007 (0%)

Query: 1163 TSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQSASAFLSESLSESTSES 1222
TS I + + +E + S ++ ES S +++
Sbjct: 99 TSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQT 158

Query: 1223 TSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSESVSTS 1282
+ ST T S + GST T+ +ST + ST T+ ++ST S T+
Sbjct: 159 IEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTA 218

Query: 1283 LSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTSLSGSTS 1342
S+ + ST SD T+ S + S+ + S + S+ +G S
Sbjct: 219 GEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 278

Query: 1343 ESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDS 1402
+ S + ST + + S +G ST T+ S T+ S + S + +
Sbjct: 279 TQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTA 338

Query: 1403 NSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQSGSTS 1462
S + S+ + S T+ S T+ ST T+ SD T+ GST
Sbjct: 339 GYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTA------GYGSTG 392

Query: 1463 TSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSASASES 1522
T+ + S + S + S T+ ST + S +G ST T+ +S+ +
Sbjct: 393 TAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGY 452

Query: 1523 DSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTS 1582
S+ T+ DS+ + S +Q S + STST+ S++ ++ ST +G S
Sbjct: 453 GSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSL--IAGYGSTQTAGYGS 510

Query: 1583 ESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQSMS 1642
T+ ST T+ ++S + S S + + S+ + ST ++ S+ T+ S +
Sbjct: 511 TLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTA 570

Query: 1643 LSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVMSASIS 1702
S T+ ST + S S + S T+ S + ST T+ S + + S
Sbjct: 571 REGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGS 630

Query: 1703 DSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGS 1762
S + ++S + S + +S +G S + S T+ S S + + S +
Sbjct: 631 TSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIA 690

Query: 1763 QSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGS 1822
S + +S + S ++++ S+ S S ST+G+ S+ +G ST T+ S
Sbjct: 691 GYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHS 750

Query: 1823 ESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGS 1882
+ S + S T+ S S +G+ S + ST + S + S +
Sbjct: 751 SLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTA 810

Query: 1883 ESTSTSVSDSQSSSTSNSQFDSMSISASESDSMSTSDSSNISGSNSTSTSLSTSDSMSGS 1942
+ S + S+ST+ DS I+ S + +S +G ST T+ SD +G
Sbjct: 811 QERSDLTTGYGSTSTAG--ADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGY 868

Query: 1943 VSVSTSTSLSDSISGSTSVSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSISTSMSMS 2002
S ST+ S I+G S + S T+ S +Q S +G STS + S
Sbjct: 869 GSTSTAGYDSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSL 928

Query: 2003 ASTSSSQSTSVSTSLSTSDSISDSTSISISGSQSTVESESTSDSTSISDSESLSTSDSDS 2062
+ S T+ S + S T+ S + S S + S + ST +
Sbjct: 929 IAGYGSTQTASFKSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGY 988

Query: 2063 TSTSTSDSTSGSTSTSISESLSTSGSGSTSVSDSTSMSESDSTSVSMSQDKSDSTSISDS 2122
ST T+ S T+ S + GS +T+ +DS+ ++ S+ S + + S
Sbjct: 989 QSTLTAGYGSTQTAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTL 1048

Query: 2123 ESVSTSTSTSLSTSDSTSTSESLSTSMSGSQSISDSTSTSMSGSTST 2169
S S T+ S S S T+ GS I+ S+ ++G ST
Sbjct: 1049 ISGLRSVLTAGYGSSLISGRRSSLTAGYGSNQIASHRSSLIAGPEST 1095



Score = 52.1 bits (124), Expect = 3e-08
Identities = 193/856 (22%), Positives = 350/856 (40%), Gaps = 14/856 (1%)

Query: 1329 DSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTS 1388
S + ++ + + + S + + + + T +T S ST +
Sbjct: 97 TKTSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPT 156

Query: 1389 LSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDS 1448
++ + S + SQ + ST T+ S + Y S T+ ++ST + S
Sbjct: 157 QTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQ 216

Query: 1449 TSISKSTSQSGSTSTSASLSGSESESDSQSISTSASEST--SESASTSLSDSTSTSNSGS 1506
T+ +S+ +G ST + GS+ + S T+ +S+ + ST + S+ +G
Sbjct: 217 TAGEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGY 276

Query: 1507 ASTSTSLSNSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTI 1566
ST T+ S + S+ T+ +DS+ + S + S + ST T+ + S +
Sbjct: 277 GSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDL 336

Query: 1567 ASLSTSVSTSESGST------SESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDS 1620
+ S T+ S+ S T+ DS+ T+ S T++ S + ST T+ +
Sbjct: 337 TAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGA 396

Query: 1621 RSTSASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVS 1680
S+ + S +T+ +S + ST T+ S + S T+ S+ +G S
Sbjct: 397 DSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQ 456

Query: 1681 ISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSGS 1740
+ DS+ T+ S + SD + S + + S + S +G S +G
Sbjct: 457 TAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGY 516

Query: 1741 LSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSKS 1800
S T+ +S+ ++ S S + + S ++ S+ + S+ ++ S + S
Sbjct: 517 GSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDL 576

Query: 1801 TSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGSTS 1860
T+G ST T+GS S+ + GS + S + S T+ S +G S S + +
Sbjct: 577 TAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGA 636

Query: 1861 LST------SDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDSMSISASESDS 1914
S+ S + S+ ++ S + S + STS + DS I+ S
Sbjct: 637 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQ 696

Query: 1915 MSTSDSSNISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGSTSVSDSSSTSTSTSLS 1974
+ +S +G ST T+ SD SG S ST+ + S I+G S +S S+ T+
Sbjct: 697 TAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGY 756

Query: 1975 DSMSQSQSTSTSASGSLSTSISTSMSMSASTSSSQSTSVSTSLSTSDSISDSTSISISGS 2034
S ++ S +G STS + + S + S T+ S+ T+ S T+ S
Sbjct: 757 GSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDL 816

Query: 2035 QSTVESESTSDSTSISDSESLSTSDSDSTSTSTSDSTSGSTSTSISESLSTSGSGSTSVS 2094
+ S ST+ + S + ST + S T+ S T+ S+ + GS ST+
Sbjct: 817 TTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGY 876

Query: 2095 DSTSMSESDSTSVSMSQDKSDSTSISDSESVSTSTSTSLSTSDSTSTSESLSTSMSGSQS 2154
DS+ ++ ST + + S + S T+ S ST+ ES + GS
Sbjct: 877 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQ 936

Query: 2155 ISDSTSTSMSGSTSTS 2170
+ ST M+G S+
Sbjct: 937 TASFKSTLMAGYGSSQ 952



Score = 51.3 bits (122), Expect = 5e-08
Identities = 200/886 (22%), Positives = 350/886 (39%), Gaps = 6/886 (0%)

Query: 797 KSTSVSLSDSVSASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNS 856
++ + + SA + + ++ V+ + + S V+S + D +
Sbjct: 89 RAEVLHVGTKTSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATI 148

Query: 857 NSTEKSESLSTSTSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTS 916
S + + + T + S ++ GS + ST I+G ST + +DST
Sbjct: 149 ESGSTQPTQTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTL 208

Query: 917 NAISTSTSLSESASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSKSMSTSESLS 976
A ST + S+ + S S T+ S T+ S+ + ST +
Sbjct: 209 VAGYGSTQTAGEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGE 268

Query: 977 DSTSTSGSVSGSLSIAASQSVSTSTSDSMSTSEIVSDSISTSGSLSASDSKSMSVSSSMS 1036
DS+ T+G S + S + S + ++ + S + +S + S
Sbjct: 269 DSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQ 328

Query: 1037 TSQSGSTSESLSDSQSTSDSDSKSLSLSTSQSGSTSTSTSTSASVRTSESQSTSGSMSAS 1096
T+Q GS + S T+ DS + + GST T+ S+ S T+ S
Sbjct: 329 TAQKGSDLTAGYGSTGTAGDDSSLI----AGYGSTQTAGEDSSLTAGYGSTQTAQKGSDL 384

Query: 1097 QSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTSNSERTSTSVS 1156
+ S T+ +DS+ + ST ++ S + S + S T+ T T+
Sbjct: 385 TAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGD 444

Query: 1157 DSTSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQSASAFLSESLS 1216
DS+ ++ S + S+ + + ++ S + STS + +S+ S
Sbjct: 445 DSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQ 504

Query: 1217 ESTSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKS 1276
+ ST + ST + + SD + GSTST+ +NS+ + ST T+ S T
Sbjct: 505 TAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGY 564

Query: 1277 ESVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTS 1336
S T+ S T+ ST + S S + S ++ S+ + S + S
Sbjct: 565 GSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVL 624

Query: 1337 LSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMN 1396
+G S S + + SS + ST + S T+G ST T+ SD T+ S S +
Sbjct: 625 TTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGA 684

Query: 1397 QSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTS 1456
S + + S + S T+ S T+ S TS STST+ + S + ST
Sbjct: 685 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQ 744

Query: 1457 QSGSTSTSASLSGSESESDSQSISTS--ASESTSESASTSLSDSTSTSNSGSASTSTSLS 1514
+ S+ + GS + QS+ T+ S ST+ + S+ ++ ST +G S T+
Sbjct: 745 TASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGY 804

Query: 1515 NSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVS 1574
S ++ S T+ STS + S + S + S T+ ST + S
Sbjct: 805 GSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDL 864

Query: 1575 TSESGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTS 1634
T+ GSTS + +S + S + S +G ST T+ +S T+ STS
Sbjct: 865 TTGYGSTSTAGYDSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGY 924

Query: 1635 TSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVS 1680
S + ST T++ S + S + S+ + GS S++
Sbjct: 925 ESSLIAGYGSTQTASFKSTLMAGYGSSQTAREQSSLTAGYGSTSMA 970



Score = 49.0 bits (116), Expect = 3e-07
Identities = 206/894 (23%), Positives = 361/894 (40%), Gaps = 6/894 (0%)

Query: 733 TDASGNKTTTTFKYEVTRNSMSDSVSTSGSTQQSQSVSTSKADSQSASTSTSGSIVVSTS 792
T G+ T + T + S ++ GSTQ + ST A S T+ GS + +
Sbjct: 281 TAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGY 340

Query: 793 ASTSKSTSVSLSDSVSASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDS 852
ST + S + S + +S+ + ST S ++ GS + + S
Sbjct: 341 GSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSL 400

Query: 853 ISNSNSTEKSESLSTSTSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLS 912
I+ ST+ + ST T+ T T+ S + GS + S+ I+G ST +
Sbjct: 401 IAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGE 460

Query: 913 DSTSNAISTSTSLSESASTSDSISISNSIANSQSA------STSKSDSQSTSISLSTSDS 966
DS+ A ST ++ S + S S A +S+ ST + ST + S
Sbjct: 461 DSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQ 520

Query: 967 KSMSTSESLSDSTSTSGSVSGSLSIAASQSVSTSTSDSMSTSEIVSDSISTSGSLSASDS 1026
+ + S+ ++ STS + + S IA S T++ +S+ T+ S + GS +
Sbjct: 521 TAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGY 580

Query: 1027 KSMSVSSSMSTSQSGSTSESLSDSQSTSDSDSKSLSLSTSQSGSTSTSTSTSASVRTSES 1086
S + S S+ +G S + S+ + S + QS T+ STS + S
Sbjct: 581 GSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSL 640

Query: 1087 QSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTS 1146
+ GS + +S+ + S T+ S TA S S + + S+ + ST +
Sbjct: 641 IAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGY 700

Query: 1147 NSERTSTSVSDSTSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQS 1206
NS T+ S T+ S+ S STST+ + S I+ ST + S+ T+ S
Sbjct: 701 NSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGSTQ 760

Query: 1207 ASAFLSESLSESTSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTS 1266
+ S + S ST+ + SS + S + S T+ S T+ S T+
Sbjct: 761 TAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTTGY 820

Query: 1267 ISESTSTFKSESVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTS 1326
S ST+ S ++ S T+ S T+ S + +S + S ST+ S+
Sbjct: 821 GSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDSSL 880

Query: 1327 KSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTS 1386
+ ST T+ S + ST +++ SD T+ S S + S+ + S ++
Sbjct: 881 IAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQTASF 940

Query: 1387 TSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLS 1446
S ++ + S+ + STS + +S + T + QS T+ S
Sbjct: 941 KSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGYGSTQ 1000

Query: 1447 DSTSISKSTSQSGSTSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGS 1506
+ S T+ GST+T+ + S + S S S T+ ST +S S +G
Sbjct: 1001 TAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVLTAGY 1060

Query: 1507 ASTSTSLSNSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTI 1566
S+ S S+ + S+ + S+ + S + + S ++ S+ T+ ST+
Sbjct: 1061 GSSLISGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNRSMLIAGKGSSQTAGYRSTL 1120

Query: 1567 ASLSTSVSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDS 1620
S + SV + + ++S T+ S + + S +G S T+ +D
Sbjct: 1121 ISGADSVQMAGERGKLIAGADSTQTAGDRSKLLAGNNSYLTAGDRSKLTAGNDC 1174



Score = 47.8 bits (113), Expect = 6e-07
Identities = 241/1091 (22%), Positives = 433/1091 (39%), Gaps = 10/1091 (0%)

Query: 907 TSASLSDSTSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDS 966
TSA A + + ++ S ++ + N T D+ S S + +
Sbjct: 99 TSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQT 158

Query: 967 KSMSTSESLSDSTSTSGSVSGSLSIAASQSVSTSTSDSMSTSEIVSDSISTSGSLSASDS 1026
++T S T S ++G S + ST + ST +DS +G S +
Sbjct: 159 IEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTA 218

Query: 1027 KSMSVSSSMSTSQSGSTSESLSDSQSTSDSDSKSLSLSTSQSGSTSTSTSTSASVRTSES 1086
S + S S + S + S + GST T+ S+ S
Sbjct: 219 GEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 278

Query: 1087 QSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTS 1146
T+ S + S T+ +DS+ + ST ++ S + S + S T+
Sbjct: 279 TQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTA 338

Query: 1147 NSERTSTSVSDSTSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQS 1206
T T+ DS+ ++ S + S+ + + ++ S + ST + + S
Sbjct: 339 GYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADS 398

Query: 1207 ASAFLSESLSESTSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTS 1266
+ S + EST + ST + SD T+ GST T+ +S+ + ST T+
Sbjct: 399 SLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTA 458

Query: 1267 ISESTSTFKSESVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMS--TSDSIS 1324
+S+ T S T+ S T+ STS + S + S + S T+ S
Sbjct: 459 GEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGS 518

Query: 1325 TSKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTS------TS 1378
T + + S + GSTS + ++S+ + S T+ S+ + GST T+ T+
Sbjct: 519 TQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTA 578

Query: 1379 TSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSES 1438
S T+ S S + S ++ S + ST T+ S T+ Y S ST+ ++S
Sbjct: 579 GYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADS 638

Query: 1439 TSTSTSLSDSTSISKSTSQSGSTSTSASLSGSESESDSQSISTSASESTSESASTSLSDS 1498
+ + S T+ S +G ST + GS+ + S ST+ ++S+ + S +
Sbjct: 639 SLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTA 698

Query: 1499 TSTSNSGSASTSTSLSNSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTS 1558
S + ST + S S STS + + S+ + S ++ S + S
Sbjct: 699 GYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGS 758

Query: 1559 TSNRMSTIASLSTSVSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTS 1618
T + STS +G+ S + ST T+ S T+ S + S T+
Sbjct: 759 TQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTT 818

Query: 1619 DSRSTSASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMS 1678
STS + + S + S + S T+ ST + SD T+ S ST+G S
Sbjct: 819 GYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDS 878

Query: 1679 VSISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDS 1738
I+ ST T+ S + + S + S + S S + +S ++G S +
Sbjct: 879 SLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQTA 938

Query: 1739 GSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDS 1798
S + S + S + S S++ DSS ++ S +++ S + S
Sbjct: 939 SFKSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGYGS 998

Query: 1799 KSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGS 1858
T+ +ST T+G ST+T+ + S ++ S S S T+ S +SG S+ +
Sbjct: 999 TQTAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVLTA 1058

Query: 1859 TSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDSMSISASESDSMSTS 1918
S+ S S + S + S+ ++ +S+ + ++ SM I+ S +
Sbjct: 1059 GYGSSLISGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNR--SMLIAGKGSSQTAGY 1116

Query: 1919 DSSNISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGSTSVSDSSSTSTSTSLSDSMS 1978
S+ ISG++S + ++G+ S T+ S ++G+ S + S T+ +D +
Sbjct: 1117 RSTLISGADSVQMAGERGKLIAGADSTQTAGDRSKLLAGNNSYLTAGDRSKLTAGNDCIL 1176

Query: 1979 QSQSTSTSASG 1989
+ S +G
Sbjct: 1177 MAGDRSKLTAG 1187


30SaurJH9_0102SaurJH9_0114N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_01020112.727509myosin-cross-reactive antigen
SaurJH9_01031153.117400hypothetical protein
SaurJH9_01042163.416296GntR family transcriptional regulator
SaurJH9_01052163.297255hypothetical protein
SaurJH9_01061173.517889hypothetical protein
SaurJH9_01070152.662290L-lactate transport
SaurJH9_01080143.259486cell wall anchor domain-containing protein
SaurJH9_0109-1142.648824hypothetical protein
SaurJH9_0110-2131.913309SarA family transcriptional regulator
SaurJH9_0111-2111.275584transport system permease
SaurJH9_0112-111-0.018607transport system permease protein
SaurJH9_0113110-0.330502hypothetical protein
SaurJH9_0114112-1.115577periplasmic binding protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0102FERRIBNDNGPP707e-16 Ferrichrome-binding periplasmic protein signature.
		>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature.

Length = 296

Score = 70.4 bits (172), Expect = 7e-16
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 38/191 (19%)

Query: 53 PKRVVTLYQGATDVAVSLGVKPVGAVES-----WTQKPKFEYIKNDLKDTKI-VGQEPAP 106
P R+V L ++ ++LG+ P G ++ W +P L D+ I VG P
Sbjct: 35 PNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPP-------LPDSVIDVGLRTEP 87

Query: 107 NLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTVFKFKD----------TTKLMG 156
NLE ++++KP +V S + L++IAP F F D + M
Sbjct: 88 NLELLTEMKPSFMVWS-AGYGPSPEMLARIAPGR----GFNFSDGKQPLAMARKSLTEMA 142

Query: 157 KALGKEKEAEDLLKKYDDKVAAFQKDAKAKY--KDAWPLKASVVNF-RADHTRIYA-GGY 212
L + AE L +Y+D F + K ++ + A PL + H ++
Sbjct: 143 DLLNLQSAAETHLAQYED----FIRSMKPRFVKRGARPL--LLTTLIDPRHMLVFGPNSL 196

Query: 213 AGEILNDLGFK 223
EIL++ G
Sbjct: 197 FQEILDEYGIP 207


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0104SYCECHAPRONE310.002 Gram-negative bacterial type III secretion SycE cha...
		>SYCECHAPRONE#Gram-negative bacterial type III secretion SycE

chaperone signature.
Length = 130

Score = 31.2 bits (70), Expect = 0.002
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 25 VDALTEALTAHAHNDFVQ-PLKPYLRQDPENGH 56
+D E T +HN F Q LKP L D GH
Sbjct: 54 LDNNDEKETLLSHNIFSQDILKPILSWDEVGGH 86


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0105PF04183316e-103 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 316 bits (812), Expect = e-103
Identities = 119/527 (22%), Positives = 208/527 (39%), Gaps = 46/527 (8%)

Query: 79 RVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQLAKQLSELDLASHPFV-- 136
R + +P+ A + + +S +++ T L + L++ +
Sbjct: 66 RCADEPVLAQTLLMQLKQVL-SMSDATVAEHMQDLYATLLGDLQLLKARRGLSASDLINL 124

Query: 137 -MSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVAAVKKTHMIHGDTANI 195
L P K +RG + + Y E +F L AVK+ HMI +
Sbjct: 125 NADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHWLAVKREHMIWRCDNEM 184

Query: 196 DELENLTVPIKEQA----TDMLNDQGLSIDDYVLFPVHPWQYQHILPNVFATEISEKLVV 251
D + LT + Q + + + GL +++ PVHPWQ+Q + F + +E +V
Sbjct: 185 DIHQLLTAAMDPQEFARFSQVWQENGLD-HNWLPLPVHPWQWQQKIATDFIADFAEGRMV 243

Query: 252 LLPLKFGD-YLSSSSMRSLIDIGAPYN-HVKVPFAMQSLGALRLTPTRYMKNGEQAEQLL 309
L +FGD +L+ S+R+L + +K+P + + R P RY+ G A + L
Sbjct: 244 SLG-EFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRYIAAGPLASRWL 302

Query: 310 RQLIEKDEALAKYVMV-CDETA-------WWSYMGQDNDIFKDQLGHLTVQLRKYPEVLA 361
+Q+ D L + V E A ++ + + +++ LG V R+ P
Sbjct: 303 QQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEMLG---VIWRENPCRWL 359

Query: 362 KNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFM-QYGAL 420
K D + V MA L D + + S D T + +V + + +YG
Sbjct: 360 KPD-ESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQLFRVVVVPLYHLLCRYGVA 418

Query: 421 PELHGQNILLSFEDGRVQKCVLRD-HDTVRIYKPWLTAHQLSLPKYV--VREDTPNTLIN 477
HGQNI L+ ++G Q+ +L+D +R+ K SLP+ V V +
Sbjct: 419 LIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMD-SLPQEVRDVTSRLSADYLI 477

Query: 478 EDLETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQL 537
DL+T V + I + GV E LL +L + + Q+
Sbjct: 478 HDLQTGHF--------VTVLRFISPLMVRLGVPERRFYQLLAAVLSDYMK-----KHPQM 524

Query: 538 AVRHILFDKQTWPFKQILLP---LLY-QRDSGGGSMPSGLTTVPNPM 580
+ R LF +++L L + D G +P+ L + NP+
Sbjct: 525 SERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEDLQNPL 571


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0106TCRTETA802e-18 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 79.9 bits (197), Expect = 2e-18
Identities = 71/372 (19%), Positives = 149/372 (40%), Gaps = 24/372 (6%)

Query: 13 ILWLSQFIAIAGLTVLVPLLPIYMASLQNLSVVEIQLWSGIAIAAPAVTTMIASPIWGKL 72
++ + + G+ +++P+LP + L + ++ GI +A A+ +P+ G L
Sbjct: 9 VILSTVALDAVGIGLIMPVLPGLLRDL--VHSNDVTAHYGILLALYALMQFACAPVLGAL 66

Query: 73 GDKISRKWMVLRALLGLAVCLFLMALCTTPLQFVLVRLLQGLFGGVVDASSAFASAEAPA 132
D+ R+ ++L +L G AV +MA + R++ G+ G + A+ +
Sbjct: 67 SDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIADITDG 126

Query: 133 EDRGKVLGRLQSSVSAGSLVGPLIGGVTASILGFSALLMSIAVITFIVCIFGALKLIETT 192
++R + G + + G + GP++GG+ A + A + + + G L E+
Sbjct: 127 DERARHFGFMSACFGFGMVAGPVLGGLMGGF-SPHAPFFAAAALNGLNFLTGCFLLPESH 185

Query: 193 HMPKSQTPNINKGIRRSFQCLLCTQQTCRFIIVGVLANFAMYGMLTALSPLASSVNHTAI 252
+ SF+ + V A A++ ++ + + +++
Sbjct: 186 KGERRPLRREALNPLASFR--------WARGMTVVAALMAVFFIMQLVGQVPAALWVIFG 237

Query: 253 DDR-----SVIGFLQSAF-WTASILSAPLWGRFNDKSYVKSVYIFATIACGCSAILQGLA 306
+DR + IG +AF S+ A + G + + + IA G IL A
Sbjct: 238 EDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAFA 297

Query: 307 TNIEFLMAARILQGLTYSAL--IQSVMFVVVNACHQ-QLKGTFVGTTNSMLVVGQIIGSL 363
T +L + +Q+++ V+ Q QL+G+ T+ + I+G L
Sbjct: 298 TRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTS----LTSIVGPL 353

Query: 364 SGAAITSYTTPA 375
AI + +
Sbjct: 354 LFTAIYAASITT 365


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0107PF041833014e-97 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 301 bits (772), Expect = 4e-97
Identities = 118/540 (21%), Positives = 212/540 (39%), Gaps = 63/540 (11%)

Query: 3 NKELIQHAAYAAIERILNEYFREENLYQVPPQNHQWSIQLSELE-TLTGEFRYWSAMGHH 61
N + + ++L+E E+ + + ++ I L + E W G
Sbjct: 2 NHKDWDLVNRRLVAKMLSELEYEQVFHAESQGDDRYCINLPGAQWRFIAERGIW---GW- 57

Query: 62 MYHPEVWLIDGKSKKITTYKEAIARILQHMAQSADNQTA-VQQHMAQIMSDI--DNSIHR 118
ID ++ + +L + Q A V +HM + + + D + +
Sbjct: 58 ------LWIDAQTLRCADEPVLAQTLLMQLKQVLSMSDATVAEHMQDLYATLLGDLQLLK 111

Query: 119 TARYLQSNTIDYVEDRYIVSEQSLYLGHPFHPTPKSASGFSEADLEKYAPECHTSFQLHY 178
R L ++ + + Q L GHP K G+ + LE+YAPE +F+LH+
Sbjct: 112 ARRGLSASDL---INLNADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHW 168

Query: 179 LAVHQD-------------VLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPTHPY 225
LAV ++ LLT ++ +E ++Q +D +++ LP HP+
Sbjct: 169 LAVKREHMIWRCDNEMDIHQLLTAAMDPQEFARFSQVWQENGLD-----HNWLPLPVHPW 223

Query: 226 QINVLRQHPQYMQYSEQGLIKDLGVSGDLVYPTSSVRTVF--SKALNIYLKLPIHVKITN 283
Q ++ +G + LG GD S+RT+ S+ + +KLP+ + T+
Sbjct: 224 QWQQK-IATDFIADFAEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTS 282

Query: 284 FIRTNDLEQIERTIDAAQVIASVKDE-----------VETPHFKLMFEEGYRALLPNPLG 332
R I A++ + V + P + EGY AL P
Sbjct: 283 CYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYR 342

Query: 333 QTVEPEMDLLTNSAMIVREGIPNY-HADKDIHVLASLFETMPD-SPISKLAQVIEQSGLA 390
EM +I RE + D+ ++A+L E + P+ I++SGL
Sbjct: 343 YQ---EM-----LGVIWRENPCRWLKPDESPVLMATLMECDENNQPL--AGAYIDRSGLD 392

Query: 391 PEAWLECYLDRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEG-ICLSRT 449
E WL ++P+ L G++L AH QN + +K+G+P ++D +G + L +
Sbjct: 393 AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKE 452

Query: 450 IATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWQLVA 509
E +P V + + A D H L+ V L + + + E +QL+A
Sbjct: 453 EFPEMDSLPQEVRDVTSRLSA-DYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQLLA 511


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0108PF04183514e-179 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 514 bits (1324), Expect = e-179
Identities = 146/592 (24%), Positives = 257/592 (43%), Gaps = 40/592 (6%)

Query: 1 MNQTILNRVKTRVMHQLVSSLIYENIVVYKASYQDGVGHFTIEGHDSEYRFTAEKTHSFD 60
MN + V R++ +++S L YE + + A Q G + I +++RF AE+ +
Sbjct: 1 MNHKDWDLVNRRLVAKMLSELEYEQV--FHAESQ-GDDRYCINLPGAQWRFIAERG-IWG 56

Query: 61 RIRITSPIERVVGDEADTTTDYTQLLREAVFTFPKNDEKLEQFIVELLQTELKDTQSMQY 120
+ I + R AD LL + +D + + + +L T L D Q ++
Sbjct: 57 WLWIDAQTLRC----ADEPVLAQTLLMQLKQVLSMSDATVAEHMQDLYATLLGDLQLLKA 112

Query: 121 RESNPPATPETFN-DYEFYAMEGHQYHPSYKSRLGFTLSDNLKFGPDFVPNVKLQWLAID 179
R + N D + GH K R G+ ++ P++ +L WLA+
Sbjct: 113 RRGLSASDLINLNADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHWLAVK 172

Query: 180 KDKVETTVSRNVVVNEMLRQQVGDKTYEHFVQQIEASGKHVNDVEMIPVHPWQFEHVIQV 239
++ + + ++++L + + + F Q + +G N + +PVHPWQ++ I
Sbjct: 173 REHMIWRCDNEMDIHQLLTAAMDPQEFARFSQVWQENGLDHNWL-PLPVHPWQWQQKIAT 231

Query: 240 DLAEERLNGTVLWLGESDELYHPQQSIRTMSPIDTT-KYYLKVPISITNTSTKRVLAPHT 298
D + G ++ LGE + + QQS+RT++ +K+P++I NTS R +
Sbjct: 232 DFIADFAEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRY 291

Query: 299 IENAAQITDWLKQIQQQDMYLKDE----LKTVFLGEVLGQSYLNTQLSPYKQTQVYGALG 354
I + WL+Q+ D L L G V + Y +PY+ ++ LG
Sbjct: 292 IAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEM---LG 348

Query: 355 VIWRENIYHMLIDEEDAIPFNALYASDKDGLPFIEKWIKQYG--SEAWTKQFLAVAIRPM 412
VIWREN L +E + L D++ P +I + G +E W Q V + P+
Sbjct: 349 VIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLDAETWLTQLFRVVVVPL 408

Query: 413 IHMLYYHGIAFESHAQNMMLIHENGWPTRIALKDFHDGVRFKREHLSEAASHLTLKPMPE 472
H+L +G+A +H QN+ L + G P R+ LKDF +R +E E S +P+
Sbjct: 409 YHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMDS------LPQ 462

Query: 473 AHKKVNSNSFIETDDERLVRDFLH---DAFFFINIAEIILFIEKQYGIDEQRQWQWVKDI 529
+ V S RL D+L F+ + I + + G+ E+R +Q + +
Sbjct: 463 EVRDVTS---------RLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQLLAAV 513

Query: 530 IEAYQEAFPELNN-YQHFDLFEPTIQVEKLTTRRL-LSDSELRIHHVTNPLG 579
+ Y + P+++ + F LF P I L +L D + + N L
Sbjct: 514 LSDYMKKHPQMSERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLE 565


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0113DHBDHDRGNASE1284e-38 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig...
		>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

signature.
Length = 261

Score = 128 bits (323), Expect = 4e-38
Identities = 66/250 (26%), Positives = 113/250 (45%), Gaps = 2/250 (0%)

Query: 5 KVALVTGGAQGIGFKIAERLVEDGFKVAVVDFNEEGAKAAALKLSSDGTKAIAIKADVSN 64
K+A +TG AQGIG +A L G +A VD+N E + L ++ A A ADV +
Sbjct: 9 KIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLKAEARHAEAFPADVRD 68

Query: 65 RDDVFNAVRQTAAQFGDFHVMVNNAGLGPTTPIDTITEEQFKTVYGVNVAGVLWGIQAAH 124
+ + + G ++VN AG+ I ++++E+++ + VN GV ++
Sbjct: 69 SAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDEEWEATFSVNSTGVFNASRSVS 128

Query: 125 EQFKKFNHGGKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAP 184
+ G I+ S ++ Y S+K A T+ +LA I N +P
Sbjct: 129 KYMMD-RRSGSIVTVGSNPAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVSP 187

Query: 185 GIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLAGKDSDYI 244
G +T M S+ + E F + I L ++++P D+++ V FL + +I
Sbjct: 188 GSTETDMQWSLWADENGAEQVIKGSL-ETFKTGIPLKKLAKPSDIADAVLFLVSGQAGHI 246

Query: 245 TGQTIIVDGG 254
T + VDGG
Sbjct: 247 TMHNLCVDGG 256


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0114NUCEPIMERASE2179e-71 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 217 bits (554), Expect = 9e-71
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 33/327 (10%)

Query: 3 RVLITGGAGFIGSHLVDDL-QQDYDVYVLDNYRTG-----KRENIKSLADDHVF--ELDI 54
+ L+TG AGFIG H+ L + + V +DN K+ ++ LA ++D+
Sbjct: 2 KYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKIDL 61

Query: 55 REYDAVEQIMKTYQFDYVIHLAALVSVAESVEKPILSQEINVVATLRLLEIIKKYNSHIK 114
+ + + + + F+ V ++V S+E P + N+ L +LE + I+
Sbjct: 62 ADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNK--IQ 119

Query: 115 RFIFASSAAVYGDLPDLPKSDQSLI-LPLSPYAIDKYYGERTTLNYCSLYNIPTAVVKFF 173
++ASS++VYG +P S + P+S YA K E Y LY +P ++FF
Sbjct: 120 HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFF 179

Query: 174 NVFGPRQDPKSQYSGVISKMFDSFEHNKPFTFFGDGLQTRDFVYVYDVVQSVRLIMEH-- 231
V+GP P M K + G RDF Y+ D+ +++ + +
Sbjct: 180 TVYGPWGRPDMALFKFTKAML----EGKSIDVYNYGKMKRDFTYIDDIAEAIIRLQDVIP 235

Query: 232 ---------------KDAIGHGYNIGTGTFTNLLEVYRIIGELYGKSVEHEFKEARKGDI 276
A YNIG + L++ + + + G + + GD+
Sbjct: 236 HADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPLQPGDV 295

Query: 277 KHSYADISNL-KALGFVPKYTVETGLK 302
+ AD L + +GF P+ TV+ G+K
Sbjct: 296 LETSADTKALYEVIGFTPETTVKDGVK 322


31SaurJH9_0163SaurJH9_0167N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_01632141.533599hypothetical protein
SaurJH9_01643131.814955O-antigen polymerase
SaurJH9_01652142.515397hypothetical protein
SaurJH9_01662152.089918group 1 glycosyl transferase
SaurJH9_01671152.000196sugar transferase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0163TCRTETA320.004 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 32.1 bits (73), Expect = 0.004
Identities = 61/337 (18%), Positives = 127/337 (37%), Gaps = 33/337 (9%)

Query: 7 TLKVRLISNFLQLIITTAFIPFIALYLTDMLS----QSIVGIYLVGLVVLKFPLSIISGY 62
L V L + L + +P + L D++ + GI L +++F + + G
Sbjct: 6 PLIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGA 65

Query: 63 LIEIFPKKLLVLIYQATMVIMLVFMGVFGSHQLWQI-IGFCVAYAIFTIVWGLQFPVMDT 121
L + F ++ ++L+ A + M + LW + IG VA + G V
Sbjct: 66 LSDRFGRRPVLLVSLAGAAVDYAIMAT--APFLWVLYIGRIVAG-----ITGATGAVAGA 118

Query: 122 LIMDAITEDVEHYIYKISYWMTNLSVAIGALLGGLMYGYSMLLLFLIAACIFLIVLFILY 181
I D D + + G +LGGLM G+S F AA + +
Sbjct: 119 YIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTGC 178

Query: 182 IWLPQDRNQVKQSDDKRHASRYQKLQIMNIFRSYKLVLKDRNYMLLISGFSIIMMGEFSI 241
LP+ ++ + + + L+ F + ++G+
Sbjct: 179 FLLPESHKGERRPLRREALNPLASFRWARGMTVVAA--------LMAVFFIMQLVGQVPA 230

Query: 242 SSYIAIRLKDQF--ETISIGSYDITGAKMLAILLMINTVVVILLTYSISKVVLKIDFKKA 299
+ + I +D+F + +IG LA +++++ ++T ++ ++ ++A
Sbjct: 231 ALW-VIFGEDRFHWDATTIGI-------SLAAFGILHSLAQAMITGPVAA---RLGERRA 279

Query: 300 LITGLLIYIVGYSGLTYLNQFGLLVVFMIIATVGEII 336
L+ G++ GY L + + + M++ G I
Sbjct: 280 LMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIG 316


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0164NUCEPIMERASE538e-09 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 52.9 bits (127), Expect = 8e-09
Identities = 54/266 (20%), Positives = 101/266 (37%), Gaps = 55/266 (20%)

Query: 2046 NTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFS----EETVE 2101
L+TGA GF+G ++ + L H++ + D NLNDY+ + +E
Sbjct: 2 KYLVTGAAGFIGFHVSKRLLEAGHQV---VGID-----------NLNDYYDVSLKQARLE 47

Query: 2102 MM----LSNIEVIVGDFECMDDVVLPENMDTIIH----AGARTDHFGDDDEFEKVNVQGT 2153
++ ++ + D E M D+ + + + R + + N+ G
Sbjct: 48 LLAQPGFQFHKIDLADREGMTDLFASGHFERVFISPHRLAVR-YSLENPHAYADSNLTGF 106

Query: 2154 VDVIRLAQQHH-ARLIYVSTISV-GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSE 2211
++++ + + L+Y S+ SV G + FS D + S Y +K +E
Sbjct: 107 LNILEGCRHNKIQHLLYASSSSVYG-----LNRKMPFSTDDSVDHPV--SLYAATKKANE 159

Query: 2212 LKVLEAVNN-GLDGRIVRVGNLTSPYNGRWHM------RNIKTNRFSMVMNDLLQLDCIG 2264
L + GL +R + P+ GR M + + + V N
Sbjct: 160 LMAHTYSHLYGLPATGLRFFTVYGPW-GRPDMALFKFTKAMLEGKSIDVYNY-------- 210

Query: 2265 VSMAEMPVDFSFVDTTARQIVALAQV 2290
+M DF+++D A I+ L V
Sbjct: 211 ---GKMKRDFTYIDDIAEAIIRLQDV 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0165ENTSNTHTASED290.009 Enterobactin synthetase component D signature.
		>ENTSNTHTASED#Enterobactin synthetase component D signature.

Length = 234

Score = 29.2 bits (65), Expect = 0.009
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 84 GQP-----IYVSLSYSYPYIVCVVDKEPVGIDIEKISQRLDWRTLVTCFSTNEAHQI 135
QP ++ S+S+ + V+ ++ +GIDIEKI + L ++ QI
Sbjct: 76 RQPLWPDGLFGSISHCATTALAVISRQRIGIDIEKIMSQHTATELAPSIIDSDERQI 132


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0167CARBMTKINASE320.002 Bacterial carbamate kinase signature.
		>CARBMTKINASE#Bacterial carbamate kinase signature.

Length = 314

Score = 31.7 bits (72), Expect = 0.002
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 155 INADTLAYFIASSLKAPIYV-LSNIAGVLIN-----DVVIPQLPLVDIHQYIEHGD-IYG 207
I+ D +A + A I++ L+++ G + + + ++ + ++ +Y E G G
Sbjct: 213 IDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGHFKAG 272

Query: 208 GMIPKVLDAKNAIENGCPKVIIAS 231
M PKVL A IE G + IIA
Sbjct: 273 SMGPKVLAAIRFIEWGGERAIIAH 296


32SaurJH9_0206SaurJH9_0214N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_02061171.448746hypothetical protein
SaurJH9_02071140.372298ABC transporter
SaurJH9_02080150.421708hypothetical protein
SaurJH9_0209-2140.793583hypothetical protein
SaurJH9_0210-2142.142405hypothetical protein
SaurJH9_0211-3122.356027hypothetical protein
SaurJH9_0212-1132.766516hypothetical protein
SaurJH9_0213-1144.061516hypothetical protein
SaurJH9_0214-1134.142917hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0206TCRTETA379e-05 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 37.5 bits (87), Expect = 9e-05
Identities = 53/361 (14%), Positives = 121/361 (33%), Gaps = 40/361 (11%)

Query: 30 AFFVVFFVYMAMYLIRNNFKAAQPFLKEEIGLSTLELGYIGL---AFSITYGLGKTLLGY 86
V + + LI P L ++ S + G+ +++ +LG
Sbjct: 10 ILSTVALDAVGIGLI----MPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGA 65

Query: 87 FVDGRNTKRIISFLLILSAITVLIMGFVLSYFGSVMGLLIVLWGLNGVFQSVGGPASYST 146
D + ++ L +A+ IM + F V+ + ++ G+ G G + +
Sbjct: 66 LSDRFGRRPVLLVSLAGAAVDYAIMAT--APFLWVLYIGRIVAGITG----ATGAVAGAY 119

Query: 147 ISRWAPRTKRGRYLGFWNTSHNIGGAIAGGVALWGANVFFHGNVIGMFIFPSVIALLIGI 206
I+ +R R+ GF + G + H F + + L +
Sbjct: 120 IADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAP----FFAAAALNGLNFL 175

Query: 207 ATLFIGKDDPEELGWNRAEEIWEEPVDKENIDSQGMTKWEIFKKYILGNPVIWILCVSNV 266
F+ + + + P+ +E ++ +W V ++ V +
Sbjct: 176 TGCFLLPE---------SHKGERRPLRREALNPLASFRWARGMT-----VVAALMAVFFI 221

Query: 267 FVYIVRIGIDNWAPLYVSEHLHFSKGDAVNTIFYFEI-GALVASLLWGYVSDLLKGRRAI 325
+ ++ W ++ + H+ ++ F I +L +++ G V+ L RRA+
Sbjct: 222 MQLVGQVPAALWV-IFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRAL 280

Query: 326 VAIGCMFMITFVVLFYTNATSVMMVNISLFALGALIFGPQLLIGVSLTGFVPKNAISVAN 385
+ +++L + + + L A G I P +L + +
Sbjct: 281 MLGMIADGTGYILLAFATRGWMAFPIMVLLASGG-IGMP------ALQAMLSRQVDEERQ 333

Query: 386 G 386
G
Sbjct: 334 G 334


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0207HTHFIS812e-19 FIS bacterial regulatory protein HTH signature.
		>HTHFIS#FIS bacterial regulatory protein HTH signature.

Length = 484

Score = 80.6 bits (199), Expect = 2e-19
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 12/169 (7%)

Query: 3 KVVICDDERIIREGLKQIIPWGDYHFNTIYTAKDGVEALSLIQQHQPELVITDIRMPRKN 62
+++ DD+ IR L Q + Y + + I +LV+TD+ MP +N
Sbjct: 5 TILVADDDAAIRTVLNQALSRAGY---DVRITSNAATLWRWIAAGDGDLVVTDVVMPDEN 61

Query: 63 GVDLLNDI--ALLDCNVIILSSYDDFEYMKAGIQHHVLDYLLKPVDHAQLEVILGRLVRT 120
DLL I A D V+++S+ + F + DYL KP D L ++G + R
Sbjct: 62 AFDLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFD---LTELIGIIGRA 118

Query: 121 LLEQQSQNGRSLASCHDAFQPLLKVEYDDYYVNQIVDQIKQSYQTKVTV 169
L E + + + D PL+ + +I + + QT +T+
Sbjct: 119 LAEPKRRPSKLEDDSQD-GMPLVG---RSAAMQEIYRVLARLMQTDLTL 163


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0208PF065801476e-42 Sensor histidine kinase
		>PF06580#Sensor histidine kinase

Length = 349

Score = 147 bits (372), Expect = 6e-42
Identities = 55/226 (24%), Positives = 109/226 (48%), Gaps = 16/226 (7%)

Query: 288 YIYDLFESNEQLIHSIEHTERRLRDIQLKEIERQFQPHFLFNTMQTIQYLITLSPKLAQT 347
+ + F++ +Q ++ QL ++ Q PHF+FN + I+ LI P A+
Sbjct: 136 FGWHFFKNYKQAEIDQWKMASMAQEAQLMALKAQINPHFMFNALNNIRALILEDPTKARE 195

Query: 348 VVQQLSQMLRYSLR-TNSHTVELNEELNYIEQYVAIQNIRFDDMIKLHIESSEEARHQTI 406
++ LS+++RYSLR +N+ V L +EL ++ Y+ + +I+F+D ++ + + +
Sbjct: 196 MLTSLSELMRYSLRYSNARQVSLADELTVVDSYLQLASIQFEDRLQFENQINPAIMDVQV 255

Query: 407 GKMMLQPLIENAIKHGRDTESLDITIRLTLARQN--LHVLVCDNGIGMSSSRLQYVRQSL 464
M++Q L+EN IKHG I L + N + + V + G L+ ++S
Sbjct: 256 PPMLVQTLVENGIKHGIAQLPQGGKILLKGTKDNGTVTLEVENTGSLA----LKNTKES- 310

Query: 465 NNDVFDTKHLGLNHLHNKAMIQYGSHARLHIFSKRNQGTLICYKIP 510
GL ++ + + YG+ A++ + K+ + + IP
Sbjct: 311 -------TGTGLQNVRERLQMLYGTEAQIKLSEKQGKVNAMVL-IP 348


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0210SHAPEPROTEIN320.006 Bacterial cell shape determinant MreB/Mbl protein s...
		>SHAPEPROTEIN#Bacterial cell shape determinant MreB/Mbl protein

signature.
Length = 347

Score = 32.4 bits (74), Expect = 0.006
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 257 AYLAAIKEQNGAAMSLGRTSTFLDIYAERDLKAGVITESEV-QEIIDHFIMKLR 309
+AA+ A LGRT +I A R +K GVI + V ++++ HFI ++
Sbjct: 50 KSVAAVGHD--AKQMLGRTPG--NIAAIRPMKDGVIADFFVTEKMLQHFIKQVH 99


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0214IGASERPTASE320.009 IgA-specific serine endopeptidase (S6) signature.
		>IGASERPTASE#IgA-specific serine endopeptidase (S6) signature.

Length = 1541

Score = 32.0 bits (72), Expect = 0.009
Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 16/215 (7%)

Query: 249 ETKQNRPNSITKYDPTKHNFKEKSENKPNFDKLVEETKKAVKEADESWKNKTVKKYEETV 308
E+K N + T N + E K N + + A ++ T K TV
Sbjct: 1047 ESKTVEKNEQDATETTAQNREVAKEAKSNVKANTQTNEVAQSGSETKETQTTETKETATV 1106

Query: 309 TKSPVVKEEKKVEEPQLPKVGNQQEVKTTAGKAEETTQPVAQPLVKIPQETIYGETVKGP 368
K +E+ KVE + +V + + ET QP A+P TV
Sbjct: 1107 EK----EEKAKVETEKTQEVPKVTSQVSPKQEQSETVQPQAEP------ARENDPTVNIK 1156

Query: 369 EYPTMENKTLQGEIVQGPDFLTMEQNRPSLSDNYTQPTTPNPILEGLEGSSSKLEIKPQG 428
E + N + Q P T ++++ T T + + + + +P
Sbjct: 1157 EPQSQTNT--TADTEQ-PAKETSSNVEQPVTESTTVNTGNSVVENPENTTPA--TTQPTV 1211

Query: 429 TESTLKGIQGESSDIEVKPQATETTEASQYGPRPQ 463
+ + V+ A+
Sbjct: 1212 NSESSNKPK-NRHRRSVRSVPHNVEPATTSSNDRS 1245


33SaurJH9_0444SaurJH9_0456N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_0444-315-0.892599NADPH-dependent FMN reductase
SaurJH9_0445016-1.630580hypothetical protein
SaurJH9_0446114-1.962652hypothetical protein
SaurJH9_0447216-1.898430N-acetyltransferase GCN5
SaurJH9_0448116-2.957423hypothetical protein
SaurJH9_0449115-1.111585hypothetical protein
SaurJH9_0450114-1.740314Dyp-type peroxidase family protein
SaurJH9_0451113-1.797641hypothetical protein
SaurJH9_0452210-1.452425hypothetical protein
SaurJH9_0453210-1.039582Sec-independent periplasmic protein translocase
SaurJH9_045429-1.128106twin arginine-targeting protein translocase
SaurJH9_0455714-3.509799hypothetical protein
SaurJH9_0456712-3.275760XRE family transcriptional regulator
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0444NUCEPIMERASE300.009 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 30.1 bits (68), Expect = 0.009
Identities = 28/167 (16%), Positives = 61/167 (36%), Gaps = 32/167 (19%)

Query: 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD----------DWRGKVSVRQ 50
M ++TGA G +G H++ + + H +G+ N+ D + +
Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEA--GHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHK 58

Query: 51 LDYFNQESMVEAFK--GMDTVVFI-------PSIIHP-SFKRIPEV--ENLVYAAKQSGV 98
+D ++E M + F + V S+ +P ++ N++ + + +
Sbjct: 59 IDLADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKI 118

Query: 99 AHIIFIG---YYADQHNNPFHMS-----PYFGYASRLLSTSGIDYTY 137
H+++ Y PF P YA+ + + +TY
Sbjct: 119 QHLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTY 165


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0445TOXICSSTOXIN953e-26 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 95.5 bits (237), Expect = 3e-26
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 11/214 (5%)

Query: 18 TGVITSNVQSVQAKTEVKQQSESELKHYYNKPVLERKNVTGYKYTEKGKDYIDVIVDNQY 77
T V S+ Q ++ + +L +Y+ N + + + + +
Sbjct: 25 TPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNS---EVLDNSLGSMRIKNTDGS 81

Query: 78 SQISLVGSDKDKFKDGDNSNIDVFILREGDSRQATN-----YSIGGVTKTNSQPFIDYIH 132
+ + S +D+ R S+ + + I GVT T P I
Sbjct: 82 ISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLP--TPIE 139

Query: 133 TPILEIKKGKEEPQSSLYQIYKEDISLKELDYRLRERAIKQHGLYSNGLKQGQI-TITMK 191
P+ GK+ P + K+ +++ LD+ +R + + HGLY + K G ITM
Sbjct: 140 LPLKVKVHGKDSPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMN 199

Query: 192 DGKSHTIDLSQKLEKERMGDSIDGRQIQKILVEM 225
DG ++ DLS+K E I+ +I+ I E+
Sbjct: 200 DGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0446TOXICSSTOXIN875e-23 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 87.0 bits (215), Expect = 5e-23
Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 22/203 (10%)

Query: 37 ISENSKKLKAYYTQPSIEYKNVTGYISFIQPSIKFMNIIDGNSVNNLALIGKDKQHYHTG 96
++N K L +Y+ S + N + S+ M I + + +L +
Sbjct: 42 TNDNIKDLLDWYSSGSDTFTN----SEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFT 97

Query: 97 VHRNLNIFYVN-----EDKRFEGAKYSIGGITSANDKA--VDLIAEARVIKADHIGEYDY 149
+++ + I G+T+ ++L + +V D +Y
Sbjct: 98 KGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGP 157

Query: 150 DFFPFKIDKEAMSLKEIDFKLRKYLIDNYGLYGEMST----GKITVKKKYYGKYTFELDK 205
F DK+ +++ +DF++R L +GLY KIT+ Y +L K
Sbjct: 158 KF-----DKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDG--STYQSDLSK 210

Query: 206 KLQEDRMSDVINVTDIDRIEIKV 228
K + + IN+ +I IE ++
Sbjct: 211 KFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0447TOXICSSTOXIN942e-24 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 93.6 bits (232), Expect = 2e-24
Identities = 44/223 (19%), Positives = 78/223 (34%), Gaps = 21/223 (9%)

Query: 140 TPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSFEFEKQFGFLLKPWTTVRFM 199
TP P+ S + IK A+ +DL +Y+ S F L ++R
Sbjct: 25 TPVPLSSNQ-------IIKTAKASTNDNIKDLLDWYSSGSDTF-TNSEVLDNSLGSMRIK 76

Query: 200 NVIPNRFIYKIALVGKDEKKYKDGPYDNIDVF-----IVLEDNKYQLKKYSVGGITKTNS 254
N + + + + +D+ ++ + + G+T T
Sbjct: 77 NTDGSI---SLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEK 133

Query: 255 KKVDHKAELSVTKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNM--G 312
+ L V + K+++++ LDF++R QL + H LY +
Sbjct: 134 LPTPIELPLKVKVHGKDSPLKYG---PKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKT 190

Query: 313 SGTIVIKMKNGGKYTFELHKKLQEHRMADVIEGTNIDKIEVNI 355
G I M +G Y +L KK + + I I IE I
Sbjct: 191 GGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0448TOXICSSTOXIN1018e-28 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 101 bits (252), Expect = 8e-28
Identities = 45/216 (20%), Positives = 81/216 (37%), Gaps = 13/216 (6%)

Query: 82 TKVETPQSPTTKQVPTEINPKFKDLRAYYTKPSLEFKNEIGIILKKWTTIRFMNIVPDYF 141
T V + K N KDL +Y+ S F N ++ ++R N
Sbjct: 25 TPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTN-SEVLDNSLGSMRIKNTDGSI- 82

Query: 142 IYKIALVGKDDKKYDEGVHRNVDVFVVLEEKNKYGVE----RYSVGGITKSNSKKVDHKA 197
+ + VD+ +K+++ E + + G+T + +
Sbjct: 83 --SLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIEL 140

Query: 198 GVRITKEDNKGTISHDVSEFKITKEQISLKELDFKLRKQLIENHNLYGNV--GSGKIVIN 255
+++ + + K K+Q+++ LDF++R QL + H LY + G I
Sbjct: 141 PLKVKVHGKDSPLKYG---PKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKIT 197

Query: 256 MKNGGKYTFELHKKLQENRMADVIDGTNIDNIEVNI 291
M +G Y +L KK + N I+ I IE I
Sbjct: 198 MNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0449TOXICSSTOXIN1352e-41 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 135 bits (340), Expect = 2e-41
Identities = 49/201 (24%), Positives = 73/201 (36%), Gaps = 14/201 (6%)

Query: 39 NVTKDIFDLRDYYSGASKELKNVTGYRYSKGGKHYLIFDKNRKFTRVQIFGKDIERFKAR 98
+ +I DL D+YS S N S G + + IF
Sbjct: 41 STNDNIKDLLDWYSSGSDTFTNSEVLDNSLGS---MRIKNTDGSISLIIFPSPYYSPAFT 97

Query: 99 KNPGLDI-----FVVKEAENRNGTVFSYGGVTKKNQDAYYDYINAPRFQIKRDEGDGIAT 153
K +D+ + F GVT + I P +K D
Sbjct: 98 KGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLP--TPIELPLK-VKVHGKDSPLK 154

Query: 154 YGRVHYIYKEEISLKELDFKLRQYLIQNFDLYKKFPKDSKI-KVIMKDGGYYTFELNKKL 212
YG K+++++ LDF++R L Q LY+ K K+ M DG Y +L+KK
Sbjct: 155 YG--PKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKF 212

Query: 213 QTNRMSDVIDGRNIEKIEANI 233
+ N I+ I+ IEA I
Sbjct: 213 EYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0450TOXICSSTOXIN1921e-63 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 192 bits (488), Expect = 1e-63
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 16/197 (8%)

Query: 42 DIKDLYRYYSSESFEFSNI--------SGKVENYNGSNVVRFNQEKQNHQLFLLGKDKDK 93
+IKDL +YSS S F+N S +++N +GS + F G+
Sbjct: 45 NIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGE---- 100

Query: 94 YKKGLEGQNVFVVKELIDPNGRLSTVGGVTKKNNKSSETNTHLFVNKVYGGNLDASIDSF 153
K L + + + + GVT + L V KV+G +
Sbjct: 101 -KVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELPLKV-KVHGKDSPLKYGP- 157

Query: 154 LINKEEVSLKELDFKIRKQLVEKYGLYKGTTKYGKI-TINLKDEKKEVIDLGDKLQFERM 212
+K+++++ LDF+IR QL + +GLY+ + K G I + D DL K ++
Sbjct: 158 KFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTE 217

Query: 213 GDVLNSKDIQNIAVTIN 229
+N +I+ I IN
Sbjct: 218 KPPINIDEIKTIEAEIN 234


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0451TOXICSSTOXIN1252e-37 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 125 bits (314), Expect = 2e-37
Identities = 47/199 (23%), Positives = 73/199 (36%), Gaps = 19/199 (9%)

Query: 42 DTNKLHQYYSGPSYELTNV--------SGQSQGYYDSNVLLFNQQNQKFQVFLLGKDENK 93
+ L +YS S TN S + + S L+ F G+
Sbjct: 45 NIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGE---- 100

Query: 94 YKEKTHGLDVFAVPELVDLDGRIFSVSGVTKKNVKSIFESLRTPNLLVKKIDDKDGFSID 153
K + + F +SGVT L L K+ KD +
Sbjct: 101 -KVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELP----LKVKVHGKDSP-LK 154

Query: 154 EFFFIQKEEVSLKELDFKIRKLLIKKYKLYEGSA-DKGRIVINMKDENKYEIDLSDKLDF 212
K+++++ LDF+IR L + + LY S G I M D + Y+ DLS K ++
Sbjct: 155 YGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEY 214

Query: 213 ERMADVINSEQIKNIEVNL 231
IN ++IK IE +
Sbjct: 215 NTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0452TOXICSSTOXIN1301e-39 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 130 bits (329), Expect = 1e-39
Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 15/197 (7%)

Query: 43 INMLHQYYSEESFESTNISVKSEDYYGSNVLNFNQRNKTFKVFLLGDDKNKY------KE 96
I L +YS S TN V + + + + + K
Sbjct: 46 IKDLLDWYSSGSDTFTNSEVLD---NSLGSMRIKNTDGSISLIIFPSPYYSPAFTKGEKV 102

Query: 97 KTHGLDVFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKHGFSINELF 156
+ + + + G+T + P L+VK F
Sbjct: 103 DLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLP--TPIELP-LKVKVHGKDSPLKYGPKF 159

Query: 157 FIQKEEVSLKELDFKIRKMLVEKYRLYKGAS-DKGRIVINMKDEKKYVIDLSEKLSFDRM 215
K+++++ LDF+IR L + + LY+ + G I M D Y DLS+K ++
Sbjct: 160 --DKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYNTE 217

Query: 216 FDVMDSKQIKNIEVNLN 232
++ +IK IE +N
Sbjct: 218 KPPINIDEIKTIEAEIN 234


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0453TOXICSSTOXIN1934e-64 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 193 bits (491), Expect = 4e-64
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 10/202 (4%)

Query: 31 KQNQKSVNKHDKEALYRYYTGKTMEMKNISALKHGKNNLRFKFRGIKIQVLLPGNDKSKF 90
K + S N + K+ L Y +G + N L + ++R K I +++ +
Sbjct: 36 KTAKASTNDNIKDLLDWYSSG-SDTFTNSEVLDNSLGSMRIKNTDGSISLIIFPSPYYSP 94

Query: 91 QQRSYEGLDVFFVQEKRDKHD-----IFYTVGGVIQNNKTSGVVSAPILNISKEKGEDAF 145
E +D+ + K+ +H I + + GV K + P L + K G+D+
Sbjct: 95 AFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTEKLPTPIELP-LKV-KVHGKDSP 152

Query: 146 VKGYPYYIKKEKITLKELDYKLRKHLIEKYGLYKTISKDGRV-KISLKDGSFYNLDLRSK 204
+K Y K+++ + LD+++R L + +GLY++ K G KI++ DGS Y DL K
Sbjct: 153 LK-YGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKK 211

Query: 205 LKFKYMGEVIESKQIKDIEVNL 226
++ I +IK IE +
Sbjct: 212 FEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_0456TOXICSSTOXIN1084e-31 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 108 bits (270), Expect = 4e-31
Identities = 47/225 (20%), Positives = 86/225 (38%), Gaps = 19/225 (8%)

Query: 16 LTTGMITTTAQPVKASTLEVRSQAT-------QDLSEYYKGRGFELTNVTGYKYG-NKVT 67
L T PV S+ ++ A +DL ++Y TN +
Sbjct: 15 LLLATTATDFTPVPLSSNQIIKTAKASTNDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMR 74

Query: 68 FIDNSQQIDVTLTGNE----KLTVKDDDEVSNVDVFVVREGSDKSAITTSIGGITKTNGT 123
+ I + + + T + +++ + S+ + I I G+T T
Sbjct: 75 IKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQISGVTNTE-- 132

Query: 124 QHKDTVQNVNLSVSKSTGQHTTSVTSEYYSIYKEEISLKELDFKLRKHLIDKHDLYKTEP 183
T + L V K G+ S K+++++ LDF++R L H LY++
Sbjct: 133 -KLPTPIELPLKV-KVHGK--DSPLKYGPKFDKKQLAISTLDFEIRHQLTQIHGLYRSSD 188

Query: 184 KDSKI-RITMKNGGYYTFELNKKLQPHRMGDTIDSRNIEKIEVNL 227
K +ITM +G Y +L+KK + + I+ I+ IE +
Sbjct: 189 KTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


34SaurJH9_1222SaurJH9_1228N        Y        YPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1222013-1.845794phage phi LC3 family holin
SaurJH9_1223013-1.993795N-acetylmuramoyl-L-alanine amidase
SaurJH9_1224111-0.704166peptidase S1 and S6, chymotrypsin/Hap
SaurJH9_1225110-0.587948H(+)-transporting two-sector ATPase
SaurJH9_1226011-0.2980935'-nucleotidase domain-containing protein
SaurJH9_12271120.138861**ComK family protein
SaurJH9_12282140.361973hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1222BICOMPNTOXIN313e-109 Staphylococcal bi-component toxin signature.
		>BICOMPNTOXIN#Staphylococcal bi-component toxin signature.

Length = 315

Score = 313 bits (803), Expect = e-109
Identities = 72/318 (22%), Positives = 144/318 (45%), Gaps = 24/318 (7%)

Query: 9 VTTTLLLGSILMNPVANAADSDINIKTGTTDIGSNTTVKTGDLVTYDKEN--GMHKKVFY 66
+TTTL + L+ P+AN + T DIG + ++ N G+ + + +
Sbjct: 7 LTTTLSVS--LLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQNIQF 64

Query: 67 SFIDDKNHNKKLLVIRTKGTIAGQYRVYSEEGANKS-GLAWPSAFKVQLQLPDNEVAQIS 125
F+ DK +NK L+++ +G I+ + Y+ + N + WP + + L+ D V+ I
Sbjct: 65 DFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTNDKYVSLI- 123

Query: 126 DYYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQPDFKTILES 185
+Y P+N I++ TL Y GN + +GG N S ++ Y Q ++ + +E
Sbjct: 124 NYLPKNKIESTNVSQTLGYNIGGNFQSAPS--LGGNGSFNYS--KSISYTQQNYVSEVEQ 179

Query: 186 PTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTRNGSMKAAENFLDPNKASSL 245
K V W V N+ ++ + + LF+ + S + F+ ++ L
Sbjct: 180 QNSKSVLWGVKANSFATESG-------QKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPL 232

Query: 246 LSSGFSPDFATVITMDRKASKQQTNIDVIYERVRD-----DYQLHWTSTNWKGTNTKDKW 300
+ SGF+P F ++ + K S + ++ Y R D H+ ++ G + +
Sbjct: 233 VQSGFNPSFIATVSHE-KGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAF 291

Query: 301 TDRS-SERYKIDWEKEEM 317
+R+ + +Y+++W+ E+
Sbjct: 292 VNRNYTVKYEVNWKTHEI 309


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1224TOXICSSTOXIN502e-09 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 49.7 bits (118), Expect = 2e-09
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 12/223 (5%)

Query: 1 MSKNITKNIILTTTLLLLGTVLPQNQKPVFSFYSEAKAYSIGQDETNINELIKYYTQPHF 60
M+K + N + + LLL T P+ S A + D NI +L+ +Y+
Sbjct: 1 MNKKLLMNFFIVSPLLLATTATDFTPVPLSSNQIIKTAKASTND--NIKDLLDWYSSGSD 58

Query: 61 SFSNKWLYQYDNGNIYVELKRYSWSAHISLWGAESWGNINQLKDRYVDVFGLKD-KDTDQ 119
+F+N DN + +K S + ++ + + + K VD+ + K
Sbjct: 59 TFTN--SEVLDNSLGSMRIKNTDGSISLIIFPSP-YYSPAFTKGEKVDLNTKRTKKSQHT 115

Query: 120 LWWSYRETFTGGVTPAAK-PSDKTYNLFVQYKDKLQTIIGAHKIYQGNKPVLTLKEIDFR 178
+Y GVT K P+ L V+ K + K +K L + +DF
Sbjct: 116 SEGTYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGPKF---DKKQLAISTLDFE 172

Query: 179 AREALIKNKILY-TENRNKGKLKIT-GGGNNYTIDLSKRLHSD 219
R L + LY + ++ G KIT G+ Y DLSK+ +
Sbjct: 173 IRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFEYN 215


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1225TOXICSSTOXIN577e-12 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 56.6 bits (136), Expect = 7e-12
Identities = 55/228 (24%), Positives = 91/228 (39%), Gaps = 15/228 (6%)

Query: 16 LLLGTAFTQFPNTPINSSSEAKAYYINQNETNVNELTKYYSQKYLTFSNSTLWQKDNGTI 75
LLL T T F P++S+ K + N+ N+ +L +YS TF+NS + G++
Sbjct: 15 LLLATTATDFTPVPLSSNQIIKTAKASTND-NIKDLLDWYSSGSDTFTNSEVLDNSLGSM 73

Query: 76 HATLLQFSWYSHIQVYGPESWGNINQLRNKSVDIFGI---KDQETIDSFALSQETFTGGV 132
++ + S + P + + + + VD+ K Q T + + + GV
Sbjct: 74 R---IKNTDGSISLIIFPSPYYSPAFTKGEKVDLNTKRTKKSQHTSEGTYIHFQI--SGV 128

Query: 133 TPA-ATSNDKHYKLNVTYKDKAETFTGGFPVYEGNKPVLTLKELDFRIRQTLIKSKKLYN 191
T L V K + + + +K L + LDF IR L + LY
Sbjct: 129 TNTEKLPTPIELPLKV--KVHGKDSPLKYG-PKFDKKQLAISTLDFEIRHQLTQIHGLYR 185

Query: 192 NSYNKGQI-KITGTDNN-YTIDLSKRLPSTDANRYVKKPQNAKIEVIL 237
+S G KIT D + Y DLSK+ + + IE +
Sbjct: 186 SSDKTGGYWKITMNDGSTYQSDLSKKFEYNTEKPPINIDEIKTIEAEI 233


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1226TOXICSSTOXIN621e-13 Staphylococcal toxic shock syndrome toxin signature.
		>TOXICSSTOXIN#Staphylococcal toxic shock syndrome toxin signature.

Length = 234

Score = 61.6 bits (149), Expect = 1e-13
Identities = 62/222 (27%), Positives = 96/222 (43%), Gaps = 17/222 (7%)

Query: 2 KKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHFS 61
KK +MN ++S LLL TT+T P+S + K S N+ NI +L+ +Y+ +
Sbjct: 3 KKLLMNFFIVSP--LLLATTATDFTPVPLSSNQIIKTAKASTND-NIKDLLDWYSSGSDT 59

Query: 62 LSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGT---KDEDTV 118
+ + GS+ ++ + +F S + + + + VD+ K + T
Sbjct: 60 FTNSEVLDNSLGSMR--IKNTDGSISLIIFPSP-YYSPAFTKGEKVDLNTKRTKKSQHTS 116

Query: 119 EGYWTYDETFTGGVTPA-ATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDF 177
EG TY GVT + L +K K + G +F +K L + LDF
Sbjct: 117 EG--TYIHFQISGVTNTEKLPTPIELPLKVKVHGKDSPLKYGPKF---DKKQLAISTLDF 171

Query: 178 RIRQTLIKNKKLYNGEFNKGQI-KIT-ADGNNYTIDLSKKLK 217
IR L + LY G KIT DG+ Y DLSKK +
Sbjct: 172 EIRHQLTQIHGLYRSSDKTGGYWKITMNDGSTYQSDLSKKFE 213


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1228CARBMTKINASE389e-139 Bacterial carbamate kinase signature.
		>CARBMTKINASE#Bacterial carbamate kinase signature.

Length = 314

Score = 389 bits (1001), Expect = e-139
Identities = 145/314 (46%), Positives = 211/314 (67%), Gaps = 7/314 (2%)

Query: 1 MMAKIVVALGGNALGK-----SPQEQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSI 55
M ++V+ALGGNAL + S +E ++ V+ TA+ + +I +G+E+VI+HGNGPQVGS+
Sbjct: 1 MGKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSL 60

Query: 56 NLGLNYAAEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVD 115
L ++ PA P GAMSQ +IGY +Q++L+NEL GM+K+VVT++TQ VD
Sbjct: 61 LLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVD 120

Query: 116 ENDPAFNNPSKPIGLFYNKEEAEQIQKEKGFIFVEDAGRGYRRVVPSPQPISIIELESIK 175
+NDPAF NP+KP+G FY++E A+++ +EKG+I ED+GRG+RRVVPSP P +E E+IK
Sbjct: 121 KNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIK 180

Query: 176 TLIKNDTLVIAAGGGGIPVIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDY 235
L++ +VIA+GGGG+PVI E KG++AVIDKD L + D +ILT ++
Sbjct: 181 KLVERGVIVIASGGGGVPVILE-DGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNG 239

Query: 236 VYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLN 295
+ + TE +Q L+ V+EL++Y +E F GSM PK+ AAI FIE + ++ I L
Sbjct: 240 AALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAI-IAHLE 298

Query: 296 ELDAALEGKVGTVI 309
+ ALEGK GT +
Sbjct: 299 KAVEALEGKTGTQV 312


35SaurJH9_1290SaurJH9_1295N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1290111-0.400163hypothetical protein
SaurJH9_1291111-0.471773hypothetical protein
SaurJH9_1292111-0.391091hypothetical protein
SaurJH9_1293112-0.572103hypothetical protein
SaurJH9_1294-1140.440162hypothetical protein
SaurJH9_12951150.682299phosphocarrier protein HPr
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1290DHBDHDRGNASE1451e-44 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig...
		>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

signature.
Length = 261

Score = 145 bits (366), Expect = 1e-44
Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 13/250 (5%)

Query: 5 KSALVTGASRGIGRSIALQLAEEGYNV-AVNYAGSKEKAEAVVEEIKAKGVDSFAIQANV 63
K A +TGA++GIG ++A LA +G ++ AV+Y + EK E VV +KA+ + A A+V
Sbjct: 9 KIAFITGAAQGIGEAVARTLASQGAHIAAVDY--NPEKLEKVVSSLKAEARHAEAFPADV 66

Query: 64 ADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQK 123
D+ + + + + G +D+LVN AG+ R L+ + ++EW+ N GVFN +
Sbjct: 67 RDSAAIDEITARIEREMGPIDILVNVAGVLRPGLIHSLSDEEWEATFSVNSTGVFNASRS 126

Query: 124 ATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 183
+ M+ +RSG+I+ + S V A Y ++KA + TK ELA I N V+
Sbjct: 127 VSKYMMDRRSGSIVTVGSNPAGVPRTSMAAYASSKAAAVMFTKCLGLELAEYNIRCNIVS 186

Query: 184 PGFIVSDMTDAL--SDELKEQML--------TQIPLARFGQDTDIANTVAFLASDKAKYI 233
PG +DM +L + EQ++ T IPL + + +DIA+ V FL S +A +I
Sbjct: 187 PGSTETDMQWSLWADENGAEQVIKGSLETFKTGIPLKKLAKPSDIADAVLFLVSGQAGHI 246

Query: 234 TGQTIHVNGG 243
T + V+GG
Sbjct: 247 TMHNLCVDGG 256


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1291ACRIFLAVINRP260.012 Acriflavin resistance protein family signature.
		>ACRIFLAVINRP#Acriflavin resistance protein family signature.

Length = 1034

Score = 26.3 bits (58), Expect = 0.012
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 33 GADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINS 74
GA++LD A+ + E P + K+ D F+
Sbjct: 296 GANALDTAKAIKAKLAELQPFFP--QGMKVLYPYDTTPFVQL 335


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1293GPOSANCHOR552e-09 Gram-positive coccus surface protein anchor signature.
		>GPOSANCHOR#Gram-positive coccus surface protein anchor signature.

Length = 539

Score = 54.7 bits (131), Expect = 2e-09
Identities = 53/326 (16%), Positives = 119/326 (36%), Gaps = 23/326 (7%)

Query: 170 KYKKRKAESLNKLDQTEDNLTRVEDILYDLEGRV-EPLKEEAAIAKEYKTLSHQMKHSDI 228
K K +E +K+ + E +E L + + E L+ + +
Sbjct: 103 KNDKSLSEKASKIQELEARKADLEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLE- 161

Query: 229 VVTVHDIDQYTNDNRQLDQRLNDLQGQQANKEADKQRLSQQIQQYKG-------KRHQLD 281
++ N + ++ L+ ++A EA + L + ++ K L+
Sbjct: 162 ----KALEGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLE 217

Query: 282 NDVESLNYQLVKATEAFEKYTGQLNVLEERKKNQSETNARYEEEQENLMELLENISNEIS 341
+ +L + +A E + K A E Q L + LE N +
Sbjct: 218 AEKAALAARKADLEKALEGAMNFSTADSAKIKTLEAEKAALEARQAELEKALEGAMNFST 277

Query: 342 EAQDTYKSLKSKQKELNAVIRELEEQLYVSD----------EAHDEKLEEIKNEYYTLMS 391
K+L++++ L A +LE Q V + +A E ++++ E+ L
Sbjct: 278 ADSAKIKTLEAEKAALEAEKADLEHQSQVLNANRQSLRRDLDASREAKKQLEAEHQKLEE 337

Query: 392 EQSDVNNDIRFLKHTIEENEAKKSRLDSRLVEVFEQLKDIQGQIKTTKKEYQQTNKELSA 451
+ + L+ ++ + K +L++ ++ EQ K + ++ +++ + +
Sbjct: 338 QNKISEASRQSLRRDLDASREAKKQLEAEHQKLEEQNKISEASRQSLRRDLDASREAKKQ 397

Query: 452 VDKEIKNIEKDLTDTKKAQNEYEEKL 477
V+K ++ L +K E EE
Sbjct: 398 VEKALEEANSKLAALEKLNKELEESK 423



Score = 53.1 bits (127), Expect = 5e-09
Identities = 31/315 (9%), Positives = 94/315 (29%), Gaps = 18/315 (5%)

Query: 177 ESLNKLDQTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYKTLSHQMKHSDIVVTVHDID 236
E +K + + L L ++ +E + + I
Sbjct: 57 ERADKFEIENNTLKLKNSDLSFNNKALKDHNDELTEELSNAKEKLRKNDKSLSEKASKIQ 116

Query: 237 QYTNDNRQLDQRLNDLQGQQANKEADKQRLSQQIQQYKGKRHQLDNDVESLNYQLVKATE 296
+ L++ L A + L + ++ L+ +E +
Sbjct: 117 ELEARKADLEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLEKALEGAMNFSTADSA 176

Query: 297 AFEKYTGQLNVLEERKKNQSETNARYEEEQENLMELLENISNEISEAQDTYKSLKSKQKE 356
+ + LE R+ + ++ + E + L+ +
Sbjct: 177 KIKTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAALAARKADLEKALEG 236

Query: 357 LNAVIRELEEQLYVSDEAHDEKLEEIKNEYYTLMSEQSDVNNDIRFLKHTIEENEAKKSR 416
++ + + + ++ L N I+ EA+K+
Sbjct: 237 AMNFSTADSAKI----KTLEAEKAALEARQAELEKALEGAMNFSTADSAKIKTLEAEKAA 292

Query: 417 LDSRLVEVFEQLKDIQGQIKTTKK--------------EYQQTNKELSAVDKEIKNIEKD 462
L++ ++ Q + + ++ ++ E+Q+ ++ + +++ +D
Sbjct: 293 LEAEKADLEHQSQVLNANRQSLRRDLDASREAKKQLEAEHQKLEEQNKISEASRQSLRRD 352

Query: 463 LTDTKKAQNEYEEKL 477
L +++A+ + E +
Sbjct: 353 LDASREAKKQLEAEH 367


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1294SUBTILISIN363e-04 Subtilisin serine protease family (S8) signature.
		>SUBTILISIN#Subtilisin serine protease family (S8) signature.

Length = 326

Score = 35.6 bits (82), Expect = 3e-04
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 11/79 (13%)

Query: 192 VGVNGVGKTTTIGKLAYRYKMEGKKVMLAAGDTFRAGAIDQLKVWGERVGVDVISQSEG- 250
GV GV + L + +L + + I Q + VD+IS S G
Sbjct: 101 NGVVGVAPEADL--LIIK--------VLNKQGSGQYDWIIQGIYYAIEQKVDIISMSLGG 150

Query: 251 SDPAAVMYDAINAAKNKGV 269
+ +++A+ A +
Sbjct: 151 PEDVPELHEAVKKAVASQI 169


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1295BONTOXILYSIN260.037 Bontoxilysin signature.
		>BONTOXILYSIN#Bontoxilysin signature.

Length = 1196

Score = 26.0 bits (57), Expect = 0.037
Identities = 11/42 (26%), Positives = 23/42 (54%)

Query: 10 LRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVS 51
L +NY + S++ ++ N L+ FY + Y + D +N++
Sbjct: 334 LNLNYFCQSFNSIIPDRFSNALKHFYRKQYYTMDYTDNYNIN 375


36SaurJH9_1475SaurJH9_1481N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1475012-2.560060signal recognition particle protein
SaurJH9_1476-112-1.87393030S ribosomal protein S16
SaurJH9_1477015-1.84004316S rRNA-processing protein RimM
SaurJH9_1478117-1.884267tRNA (guanine-N(1)-)-methyltransferase
SaurJH9_1479115-0.75917250S ribosomal protein L19
SaurJH9_1480113-1.119601hypothetical protein
SaurJH9_1481214-0.231559ribosomal biogenesis GTPase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1475PF06580371e-04 Sensor histidine kinase
		>PF06580#Sensor histidine kinase

Length = 349

Score = 37.2 bits (86), Expect = 1e-04
Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 35/185 (18%)

Query: 277 IEEMNRIIKLVEELLELTKGDVNDISSEAQTVHINDE---IRSRIHSLKQLHPD-YQFDT 332
+E+ + +++ L EL + + S A+ V + DE + S + D QF+
Sbjct: 187 LEDPTKAREMLTSLSELMRYSLRY--SNARQVSLADELTVVDSYLQLASIQFEDRLQFEN 244

Query: 333 DLTSKNLEIKMKPHQFEQLFLIFIDNAIKYDVKNKK----IKVKTRLKNKQKIIEITDHG 388
+ +++++ P L ++N IK+ + I +K N +E+ + G
Sbjct: 245 QINPAIMDVQVPPM----LVQTLVENGIKHGIAQLPQGGKILLKGTKDNGTVTLEVENTG 300

Query: 389 IGIPEEDQDFIFDRFYRVDKSRSRSQGGNGLGLSIAQKIIQL---NGGSIKIKSEINKGT 445
+ ++ G GL ++ +Q+ IK+ + K
Sbjct: 301 SLALKNTKE------------------STGTGLQNVRERLQMLYGTEAQIKLSEKQGKVN 342

Query: 446 TFKII 450
+I
Sbjct: 343 AMVLI 347


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1476HTHFIS935e-24 FIS bacterial regulatory protein HTH signature.
		>HTHFIS#FIS bacterial regulatory protein HTH signature.

Length = 484

Score = 92.6 bits (230), Expect = 5e-24
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 4/125 (3%)

Query: 2 TQILIVEDEQNLARFLELELTHENYNVDTEYDGQDGLDKALSHYYDLIILDLMLPSINGL 61
IL+ +D+ + L L+ Y+V + + DL++ D+++P N
Sbjct: 4 ATILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDGDLVVTDVVMPDENAF 63

Query: 62 EICRKIRQQQS-TPIIIITAKSDTYDKVAGLDYGADDYIVKPFDIEELLARIRAIL---R 117
++ +I++ + P+++++A++ + + GA DY+ KPFD+ EL+ I L +
Sbjct: 64 DLLPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIGIIGRALAEPK 123

Query: 118 RQPQK 122
R+P K
Sbjct: 124 RRPSK 128


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1479SACTRNSFRASE325e-04 Streptothricin acetyltransferase signature.
		>SACTRNSFRASE#Streptothricin acetyltransferase signature.

Length = 173

Score = 32.2 bits (73), Expect = 5e-04
Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 19/140 (13%)

Query: 30 EQWDDQYPLLEHFEEDIAKDYLYVLEENDKIYGFIVVDQDQAEWYDDIDWPVNREGAFVI 89
+Q++D + + EE+ +LY LE + G I + N G +I
Sbjct: 48 KQYEDDDMDVSYVEEEGKAAFLYYLE--NNCIGRIKIRS-------------NWNGYALI 92

Query: 90 HRLTGSKEY--KGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGFHKVGEQ 147
+ +K+Y KG T L + I+ K ++ +T +N A +AK F
Sbjct: 93 EDIAVAKDYRKKGVGTALLHKAIEWAKENHFCGLMLETQDINISACHFYAKHHFIIGAVD 152

Query: 148 LMEYP--PYDKGEPFYAYYK 165
M Y P + YYK
Sbjct: 153 TMLYSNFPTANEIAIFWYYK 172


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1481RTXTOXINA250.022 Gram-negative bacterial RTX toxin determinant A family...
		>RTXTOXINA#Gram-negative bacterial RTX toxin determinant A family

signature.
Length = 1024

Score = 25.3 bits (55), Expect = 0.022
Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 15 GRHDDKGRLAEEIFDDLAFPKHDDD 39
G +DK LA+ F D+AF + +D
Sbjct: 866 GGKEDKLSLADIDFRDVAFKREGND 890


37SaurJH9_1599SaurJH9_1607N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1599017-4.167855hypothetical protein
SaurJH9_1600114-2.600954DNA topoisomerase IV subunit B
SaurJH9_1601115-2.684158DNA topoisomerase IV subunit A
SaurJH9_1602-112-2.872264amino acid carrier protein
SaurJH9_1603014-3.224574transcription antiterminator
SaurJH9_1604-112-3.408846hypothetical protein
SaurJH9_1605-111-2.234166hypothetical protein
SaurJH9_1606012-2.420734methionine sulfoxide reductase A
SaurJH9_1607-112-2.432181cell envelope-related transcriptional
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1599BCTERIALGSPH405e-07 Bacterial general secretion pathway protein H signa...
		>BCTERIALGSPH#Bacterial general secretion pathway protein H

signature.
Length = 170

Score = 40.3 bits (94), Expect = 5e-07
Identities = 14/79 (17%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 5 KQSAFTMIEMLVVMMLISIFLLLTMTSKGLSNLRVIDDEA-NIISFITELNYIKSQAIAN 63
+Q FT++EM+++++L+ + + + + S D A + F +L +++ + +
Sbjct: 2 RQRGFTLLEMMLILLLMGVSAGMVLLAFPAS---RDDSAAQTLARFEAQLRFVQQRGLQT 58

Query: 64 QGYINVRFYENSDTIKVIE 82
+ V + + V+E
Sbjct: 59 GQFFGVSVHPDRWQFLVLE 77


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1600BCTERIALGSPG469e-10 Bacterial general secretion pathway protein G signa...
		>BCTERIALGSPG#Bacterial general secretion pathway protein G

signature.
Length = 145

Score = 46.4 bits (110), Expect = 9e-10
Identities = 19/76 (25%), Positives = 44/76 (57%), Gaps = 4/76 (5%)

Query: 3 KFLKKTQAFTLIEMLLVLLIISLLLILIIPNI--AKQTAHIQSTGCNAQVKMVNSQIEAY 60
+ K + FTL+E+++V++II +L L++PN+ K+ A Q + + + + ++ Y
Sbjct: 2 RATDKQRGFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKA--VSDIVALENALDMY 59

Query: 61 ALKHNRNPSSIEDLIA 76
L ++ P++ + L +
Sbjct: 60 KLDNHHYPTTNQGLES 75


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1601BCTERIALGSPF844e-20 Bacterial general secretion pathway protein F signa...
		>BCTERIALGSPF#Bacterial general secretion pathway protein F

signature.
Length = 408

Score = 84.1 bits (208), Expect = 4e-20
Identities = 65/347 (18%), Positives = 137/347 (39%), Gaps = 6/347 (1%)

Query: 14 KKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKN-KQLGTTILSEISNGAPC 72
+K +LS + L L L+ L ++ + Q + QL + S++ G
Sbjct: 61 RKIRLSTSDLALLTRQLATLVAASMPLEEALDAVAKQSEKPHLSQLMAAVRSKVMEGHSL 120

Query: 73 NQIL-SLIGYSDTI-VMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILV 130
+ G + + V E G++ VL +Y + ++ R+ + + YP +L
Sbjct: 121 ADAMKCFPGSFERLYCAMVAAGETSGHLDAVLNRLADYTEQRQQMRSRIQQAMIYPCVLT 180

Query: 131 SIFIAMIIILNLTVIPQFQQLYTSMNIQLSSFQKTLSFFITSLPTIIVVMLIIVSMLAII 190
+ IA++ IL V+P+ + + M L + L ++ T ML+ + +
Sbjct: 181 VVAIAVVSILLSVVVPKVVEQFIHMKQALPLSTRVLMGMSDAVRTFGPWMLLALLAGFMA 240

Query: 191 MKLIYNNLNMLNKIN-FVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQSIVDVYINH 249
+++ + ++ LPLI + T L + + + L + + +
Sbjct: 241 FRVMLRQEKRRVSFHRRLLHLPLIGRIARGLNTARYARTLSILNASAVPLLQAMRISGDV 300

Query: 250 SS-DPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQ 308
S D R L E G L + LE+ F P + + GE+ G+L+ L+ +
Sbjct: 301 MSNDYARHRLSLATDAVRE-GVSLHKALEQTALFPPMMRHMIASGERSGELDSMLERAAD 359

Query: 309 ILVKQIEDKAIKQTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSI 355
++ + +P+L + + ++ I L I+ P+ Q+ +
Sbjct: 360 NQDREFSSQMTLALGLFEPLLVVSMAAVVLFIVLAILQPILQLNTLM 406


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1603SHIGARICIN270.039 Ribosome inactivating protein family signature.
		>SHIGARICIN#Ribosome inactivating protein family signature.

Length = 289

Score = 27.5 bits (61), Expect = 0.039
Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 82 DFLKDPVKNGADKFKQYGLPIITSKVTPEK-------LNEGSTEIE-GFKFNVLHTPGHS 133
F+ + K + K Y +P++ S + + N I ++ G+
Sbjct: 39 VFISNLRKALPYERKLYDIPLLRSTLPGSQRYALIHLTNYADETISVAIDVTNVYVMGYR 98

Query: 134 PGSLTYVFDEFAVVG--DTLFNNGIGRTDL-YKGDYETL 169
G +Y F+E + +F + + L Y G+YE L
Sbjct: 99 AGDTSYFFNEASATEAAKYVFKDAKRKVTLPYSGNYERL 137


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1605PF03309300.012 Bvg accessory factor
		>PF03309#Bvg accessory factor

Length = 271

Score = 29.7 bits (67), Expect = 0.012
Identities = 32/154 (20%), Positives = 51/154 (33%), Gaps = 37/154 (24%)

Query: 5 ILAADVGGTTCKLGIFTPELEQ---LHKWSIHTD---TSDSTGYTLLKGIYDSFVEKVNE 58
+LA DV T +G+ + + + +W I T+ T+D + G+
Sbjct: 2 LLAIDVRNTHTVVGLISGSGDHAKVVQQWRIRTEPEVTADELA-LTIDGLI--------- 51

Query: 59 NNYNFSNVLGVGIG--VPGPVDFEKGTVNGAVNLYWPE------KVNVREIFEQFVDCPV 110
+ + G VP V E V + YWP + VR VD P
Sbjct: 52 -GDDAERLTGASGLSTVP-SVLHE---VRVMLEQYWPNVPHVLIEPGVRTGIPLLVDNPK 106

Query: 111 YVDND--ANIAALGEKHKGAGEGADDVVAITLGT 142
V D N A K+ + + G+
Sbjct: 107 EVGADRIVNCLAAYHKYGT------AAIVVDFGS 134


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1607TCRTETA330.002 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 33.3 bits (76), Expect = 0.002
Identities = 29/170 (17%), Positives = 54/170 (31%), Gaps = 51/170 (30%)

Query: 241 MLTVYFIAGLFGN--------FVSLSFNTTTISVGASGAIFGLIGSIFAMMY---VSKTF 289
++ V+FI L G F F+ ++G S A FG++ S+ M V+
Sbjct: 215 LMAVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARL 274

Query: 290 NKK----------MLGQLLIA-----------LVILVGVSLFMS------NINIVAHIGG 322
++ G +L+A +V+L + M + + G
Sbjct: 275 GERRALMLGMIADGTGYILLAFATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQG 334

Query: 323 FIGGLLITL-----------IGYYYKVNRNIF--WILLIGMLVIFIALQI 359
+ G L L Y + + W + G + + L
Sbjct: 335 QLQGSLAALTSLTSIVGPLLFTAIYAASITTWNGWAWIAGAALYLLCLPA 384


38SaurJH9_1861SaurJH9_1864N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1861211-1.671275HAD family phosphatase
SaurJH9_1862113-2.222932adenosylhomocysteine nucleosidase
SaurJH9_1863013-3.403478hypothetical protein
SaurJH9_1864115-4.653037toxin OB-fold domain-containing protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1861V8PROTEASE1159e-33 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 115 bits (289), Expect = 9e-33
Identities = 59/227 (25%), Positives = 102/227 (44%), Gaps = 26/227 (11%)

Query: 30 IQQTAKA-----ENSVKLITNTNVAPYSGVTWMGA--------GTGFVVGNHTIITNKHV 76
++Q A N IT+T Y+ VT++ +G VVG T++TNKHV
Sbjct: 61 LEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHV 120

Query: 77 TYHM-KVGDEIKAHPNGFY--NNGGGLYKVTKIVDYPGKEDIAVVQVEEKSTQPKGRKFK 133
+KA P+ N G + +I Y G+ D+A+V+ + +
Sbjct: 121 VDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSP---NEQNKHIG 177

Query: 134 DFTSKFNIA--SEAKENEPISVIGYPNPNGNKLQMYESTGKVLSVNGNIVSSDAIIQPGS 191
+ ++ +E + N+ I+V GYP + M+ES GK+ + G + D G+
Sbjct: 178 EVVKPATMSNNAETQVNQNITVTGYP-GDKPVATMWESKGKITYLKGEAMQYDLSTTGGN 236

Query: 192 SGSPILNSKHEAIGVIYAGNKPSGESTRGFAVYFSPEIKKFIADNLD 238
SGSP+ N K+E IG+ + G AV+ + ++ F+ N++
Sbjct: 237 SGSPVFNEKNEVIGIHWGGVPNEF----NGAVFINENVRNFLKQNIE 279


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1862V8PROTEASE1787e-57 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 178 bits (452), Expect = 7e-57
Identities = 64/217 (29%), Positives = 106/217 (48%), Gaps = 23/217 (10%)

Query: 37 EKNVTQVKDTNNFPYNGVVSFK--------DATGFVIGKNTIITNKHV-SKDYKVGDRIT 87
+ Q+ DT N Y V + A+G V+GK+T++TNKHV + +
Sbjct: 73 NNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALK 132

Query: 88 AHP---NGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK 144
A P N D G + + I+ Y G+ D++++ + + E V+ +
Sbjct: 133 AFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK-----HIGEVVKPATMSN 187

Query: 145 DA--KVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPGNSGSPVLNSNN 202
+A +V+ I V GYP +ES G I +K + +D GNSGSPV N N
Sbjct: 188 NAETQVNQNITVTGYPGDK-PVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKN 246

Query: 203 EVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIEQ 239
EVIG+ +GG + +E+NGAV+ +++F++++IE
Sbjct: 247 EVIGIHWGG---VPNEFNGAVFINENVRNFLKQNIED 280


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1863V8PROTEASE1824e-58 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 182 bits (462), Expect = 4e-58
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 29/230 (12%)

Query: 43 EVQQTAKA-----ENNVTKIQDTNIFPYTGVVAFKS--------ATGFVVGKNTILTNKH 89
++Q A N+ +I DT Y V + A+G VVGK+T+LTNKH
Sbjct: 60 PLEQREHANVILPNNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKH 119

Query: 90 V-SKNYKVGDRITAHP---NSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGF 145
V + + A P N D G ++ ++I Y G+ D+++++ +
Sbjct: 120 VVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNK----- 174

Query: 146 NFNDNVTPFKYAAGA--KAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGSSIVYSAHTE 203
+ + V P + A + + I V GYP K ++ES G + ++G ++ Y T
Sbjct: 175 HIGEVVKPATMSNNAETQVNQNITVTGYPGD-KPVATMWESKGKITYLKGEAMQYDLSTT 233

Query: 204 SGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENID 253
GNSGSPV N NE++GIH+ V N+ N V+ ++ F+ +NI+
Sbjct: 234 GGNSGSPVFNEKNEVIGIHWGG-VPNEFNG---AVFINENVRNFLKQNIE 279


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1864V8PROTEASE1381e-41 V8 serine protease family signature.
		>V8PROTEASE#V8 serine protease family signature.

Length = 336

Score = 138 bits (349), Expect = 1e-41
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)

Query: 36 EKNVKEITDATKAPYNSVVAFA--------GGTGVVVGKNTIVTNKHIAKSNDIFKNRVA 87
+ +ITD T Y V +GVVVGK+T++TNKH+ + + +
Sbjct: 73 NNDRHQITDTTNGHYAPVTYIQVEAPTGTFIASGVVVGKDTLLTNKHVVDATHGDPHALK 132

Query: 88 AHYS---SKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSYTKFAEGA-- 142
A S G + + I +Y G+ DLAIV + + + + V + A
Sbjct: 133 AFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVK-FSPNEQNKHIGEVVKPATMSNNAET 191

Query: 143 KAKDRISVIGYPKGAQTKYKMFESTGTINHISGTFIEFDAYAQPGNSGSPVLNSKHELIG 202
+ I+V GYP G + M+ES G I ++ G +++D GNSGSPV N K+E+IG
Sbjct: 192 QVNQNITVTGYP-GDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIG 250

Query: 203 ILYAGSGKDESEKNFGVYFTPQLKEFIQNNIE 234
I + G +E N V+ ++ F++ NIE
Sbjct: 251 IHWGGVP---NEFNGAVFINENVRNFLKQNIE 279


39SaurJH9_1878SaurJH9_1883N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_1878719-6.179078hypothetical protein
SaurJH9_1879315-4.013074Holliday junction resolvase-like protein
SaurJH9_1881112-2.693067hypothetical protein
SaurJH9_1882113-1.279029alanyl-tRNA synthetase
SaurJH9_1883113-0.837904recombinase D
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1878BACTRLTOXIN1954e-64 Bacterial toxin signature.
		>BACTRLTOXIN#Bacterial toxin signature.

Length = 266

Score = 195 bits (497), Expect = 4e-64
Identities = 109/261 (41%), Positives = 155/261 (59%), Gaps = 11/261 (4%)

Query: 4 LSTVIIILILEIVFHNMN-YVNAQPDPKLDELNKVSDYKNNKGTMGNVMNLYTSPPVEGR 62
+S VI+I L +V N +QPDP D+L+K S++ GTMGN+ LY V
Sbjct: 7 ISRVILIFALILVISTPNVLAESQPDPMPDDLHKSSEFT---GTMGNMKYLYDDHYVSAT 63

Query: 63 GVINSRQFLSHDLIFPI---EYKSYNEVKTELENTELANNYKDKKVDIFGVPYFYTCIIP 119
V + +FL+HDLI+ I + K+Y++VKTEL N +LA YKD+ VD++G Y+ C
Sbjct: 64 KVKSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKDEVVDVYGSNYYVNCYFS 123

Query: 120 KSEPDINQNFGGCCMYGGLTF---NSSENERDKLITVQVTIDNRQSLGFTITTNKNMVTI 176
+ G CMYGG+T N +N + + V+V + R ++ F + T+K VT
Sbjct: 124 SKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENKRNTISFEVQTDKKSVTA 183

Query: 177 QELDYKARHWLTKEKKLYEFDGSAFESGYIKFTEKNNTSFWFDLFPKKELVPFVPYKFLN 236
QELD KAR++L +K LYEF+ S +E+GYIKF E N +FW+D+ P F K+L
Sbjct: 184 QELDIKARNFLINKKNLYEFNSSPYETGYIKFIENNGNTFWYDMMPAPGDK-FDQSKYLM 242

Query: 237 IYGDNKVVDSKSIKMEVFLNT 257
+Y DNK VDSKS+K+EV L T
Sbjct: 243 MYNDNKTVDSKSVKIEVHLTT 263


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1879BACTRLTOXIN1559e-49 Bacterial toxin signature.
		>BACTRLTOXIN#Bacterial toxin signature.

Length = 266

Score = 155 bits (394), Expect = 9e-49
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 21/265 (7%)

Query: 2 RLFYIAAIII-TLLCLINNNYVNAEV----DKKDLKKKSDLDSSKLFNLTSYYTDITWQL 56
RLF I+I L+ +I+ V AE DL K S+ + + N+ Y D +
Sbjct: 4 RLFISRVILIFALILVISTPNVLAESQPDPMPDDLHKSSEF-TGTMGNMKYLYDDH--YV 60

Query: 57 DESNKISTDQLLNNTIILKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFGNKC 116
+ S D+ L + +I D + +K E + DLA ++K + +D+YG + C
Sbjct: 61 SATKVKSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKDEVVDVYGSNYYVNC 120

Query: 117 -------VGLTEEKTSCLYGGVTIHDGNQLDEEKV--IGVNVFKDGVQQEGFVIKTKKAK 167
VG +C+YGG+T H+GN D + + V V+++ F ++T K
Sbjct: 121 YFSSKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENKRNTISFEVQTDKKS 180

Query: 168 VTVQELDTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVG--A 225
VT QELD K R L N +Y ++ + G I F +N +F+YD+ G +
Sbjct: 181 VTAQELDIKARNFLINKKNLYEFNSSPYETGYIKFIENN--GNTFWYDMMPAPGDKFDQS 238

Query: 226 EFFQFYSDNRTVSSSNYHIDVFLYK 250
++ Y+DN+TV S + I+V L
Sbjct: 239 KYLMMYNDNKTVDSKSVKIEVHLTT 263


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1881BACTRLTOXIN1082e-30 Bacterial toxin signature.
		>BACTRLTOXIN#Bacterial toxin signature.

Length = 266

Score = 108 bits (270), Expect = 2e-30
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 37/227 (16%)

Query: 30 VGNLRNFYTKHDYIDLKGVTDKNLPIANQLEFS------TGTNDLISESNNWDEISKFKG 83
+GN++ Y H K + +A+ L ++ + + +E N D K+K
Sbjct: 48 MGNMKYLYDDHYVSATKVKSVDKF-LAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKD 106

Query: 84 KKLDIFGIDY-------------NGPCKSKYMYGGATL-SGQYLNSARKIPINLWVNGKH 129
+ +D++G +Y MYGG T G + ++ + + V
Sbjct: 107 EVVDVYGSNYYVNCYFSSKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENK 166

Query: 130 KTISTDKIATNKKLVTAQEIDVKLRRYLQEEYNIYGHNNTGKGKEYGYKSKFYSGFNNGK 189
+ + ++ T+KK VTAQE+D+K R +L + N+Y N+ + G
Sbjct: 167 RNTISFEVQTDKKSVTAQELDIKARNFLINKKNLY-EFNSSP-------------YETGY 212

Query: 190 VLFHLNNEKSFSYDLF-YTGDGLPVS-FLKIYEDNKIIESEKFHLDV 234
+ F NN +F YD+ GD S +L +Y DNK ++S+ ++V
Sbjct: 213 IKFIENNGNTFWYDMMPAPGDKFDQSKYLMMYNDNKTVDSKSVKIEV 259


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1882BACTRLTOXIN1232e-36 Bacterial toxin signature.
		>BACTRLTOXIN#Bacterial toxin signature.

Length = 266

Score = 123 bits (310), Expect = 2e-36
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 36/231 (15%)

Query: 28 NLRNYYGSYPIEDHQSINPENNHLSHQLVFSMDNST------VTAEFKNVDDVKKFKNHA 81
N++ Y + + + + L+H L++++ + V E N D KK+K+
Sbjct: 50 NMKYLYDDHYVS-ATKVKSVDKFLAHDLIYNISDKKLKNYDKVKTELLNEDLAKKYKDEV 108

Query: 82 VDVYGLSYSGYCLKNKY------------IYGGVTLA-GDYLEKSRRIPINLWVNGEHQT 128
VDVYG +Y C + +YGG+T G++ + + + V +
Sbjct: 109 VDVYGSNYYVNCYFSSKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENKRN 168

Query: 129 ISTDKVSTNKKLVTAQEIDTKLRRYLQEEYNIYGFNDTNKGRNYGNKSKFSSGFNAGKIL 188
+ +V T+KK VTAQE+D K R +L + N+Y FN SS + G I
Sbjct: 169 TISFEVQTDKKSVTAQELDIKARNFLINKKNLYEFN--------------SSPYETGYIK 214

Query: 189 FHLNDGSSFSYDLFDT-GTGQAES-FLKIYNDNKTVETEKFHLDVEISYKD 237
F N+G++F YD+ G +S +L +YNDNKTV+++ ++V ++ K+
Sbjct: 215 FIENNGNTFWYDMMPAPGDKFDQSKYLMMYNDNKTVDSKSVKIEVHLTTKN 265


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_1883BACTRLTOXIN1701e-54 Bacterial toxin signature.
		>BACTRLTOXIN#Bacterial toxin signature.

Length = 266

Score = 170 bits (433), Expect = 1e-54
Identities = 91/262 (34%), Positives = 136/262 (51%), Gaps = 20/262 (7%)

Query: 5 LLLILNLIAICSVNNAYANEE-DPKIESLCKKSSVDPIALHNINDDYINNRFTTVKSIVS 63
++LI LI + S N A + DP + L K S + N+ Y ++ + K V
Sbjct: 10 VILIFALILVISTPNVLAESQPDPMPDDLHKSSEFTG-TMGNMKYLYDDHYVSATK--VK 66

Query: 64 TTEKFLDFDLLFKSINWLDGISAEFKDLKVEFSSSAISKEFLGKTVDIYGVYYKAHCH-- 121
+ +KFL DL++ D + +K E + ++K++ + VD+YG Y +C+
Sbjct: 67 SVDKFLAHDLIYNI---SDKKLKNYDKVKTELLNEDLAKKYKDEVVDVYGSNYYVNCYFS 123

Query: 122 -----GEHQVDTACTYGGVTPHENNKLSEP--KNIGVAVYKDNVNVNTFIVTTDKKKVTA 174
G+ C YGG+T HE N +N+ V VY++ N +F V TDKK VTA
Sbjct: 124 SKDNVGKVTGGKTCMYGGITKHEGNHFDNGNLQNVLVRVYENKRNTISFEVQTDKKSVTA 183

Query: 175 QELDIKVRTKLNNAYKLYDRMTSDVQKGYIKFHSHSEHKESFYYDLFYIKGNLPDQ--YL 232
QELDIK R L N LY+ +S + GYIKF ++ +F+YD+ G+ DQ YL
Sbjct: 184 QELDIKARNFLINKKNLYEFNSSPYETGYIKFIENNG--NTFWYDMMPAPGDKFDQSKYL 241

Query: 233 QIYNDNKTIDSSDYHIDVYLFT 254
+YNDNKT+DS I+V+L T
Sbjct: 242 MMYNDNKTVDSKSVKIEVHLTT 263


40SaurJH9_2208SaurJH9_2213N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_2208-38-1.713691anion transporter
SaurJH9_2209-38-1.617784parallel beta-helix repeat-containing protein
SaurJH9_2210-38-1.344792isochorismatase hydrolase
SaurJH9_2211-38-0.564094manganese-dependent inorganic pyrophosphatase
SaurJH9_2212-29-0.280937hypothetical protein
SaurJH9_22130111.059932aldehyde dehydrogenase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2208FERRIBNDNGPP965e-25 Ferrichrome-binding periplasmic protein signature.
		>FERRIBNDNGPP#Ferrichrome-binding periplasmic protein signature.

Length = 296

Score = 96.2 bits (239), Expect = 5e-25
Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 24/257 (9%)

Query: 53 DAKRIVVLEYSFADALAALDVKPVGIADDGKKKRIIK--PVREKIGDYTSVGTRKQPNLE 110
D RIV LE+ + L AL + P G+AD + + P+ + + D VG R +PNLE
Sbjct: 34 DPNRIVALEWLPVELLLALGIVPYGVADTINYRLWVSEPPLPDSVID---VGLRTEPNLE 90

Query: 111 EISKLKPDLIIADSSRHKGINKELNKIAPTLSLKSFDGDYKQNI--NSFKTIAKALNKEK 168
++++KP ++ S+ + + L +IAP DG + S +A LN +
Sbjct: 91 LLTEMKPSFMVW-SAGYGPSPEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQS 149

Query: 169 EGEKRLAEHDKLINKYKDEIKFDRNQKVLPAVV---AKAGLLAHPNYSYVGQFLNELGFK 225
E LA+++ I K R + L + L+ PN S + L+E G
Sbjct: 150 AAETHLAQYEDFIRSMKPRF-VKRGARPLLLTTLIDPRHMLVFGPN-SLFQEILDEYGIP 207

Query: 226 NALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKK 285
NA +G + + + + LA ++ DH +S + L W+
Sbjct: 208 NAW-----QGETNFWG--STAVSIDRLAAYKDVDVLCF-DHD--NSKDMDALMATPLWQA 257

Query: 286 LNAVKNNRVDIVDRDVW 302
+ V+ R V VW
Sbjct: 258 MPFVRAGRFQRVP-AVW 273


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2209ALARACEMASE391e-05 Alanine racemase signature.
		>ALARACEMASE#Alanine racemase signature.

Length = 356

Score = 39.4 bits (92), Expect = 1e-05
Identities = 59/325 (18%), Positives = 119/325 (36%), Gaps = 33/325 (10%)

Query: 4 VNINISKIKYNAKVLQTVFQSKNIQFTPVIKCIAGDRTIVESLKALG-INHVAESRLDNI 62
++++ +K N +++ + + + V+K A I A+G + A L+
Sbjct: 7 ASLDLQALKQNLSIVRQA--ATHARVWSVVKANAYGHGIERIWSAIGATDGFALLNLEEA 64

Query: 63 ISIADQDLTYTLLRTPAKKEISDMIEKVDMSIQTELSTIHQINEVAEV-LGKKHKILLMV 121
I++ ++ +L D+ + T + + Q+ + L I L V
Sbjct: 65 ITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKV 124

Query: 122 DWKDGREGVLTYDVLDYIKEIIHLKNIHFVGLAFNFMCFKSDAPSDDDIFMINRFVSAVE 181
+ R G VL +++ + N+ + L +F ++ P D + R A E
Sbjct: 125 NSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAE--AEHP-DGISGAMARIEQAAE 181

Query: 182 REIGYRLKIISGGNSSMLPQLLYNDLGKINELRIGETLFRGVDTTTNQAIAML-YQDAIT 240
+ R + + + P+ ++ +R G L+ + + IA + +T
Sbjct: 182 -GLECRRSLSNSAATLWHPEAHFD------WVRPGIILYGASPSGQWRDIANTGLRPVMT 234

Query: 241 LEAEILEIK-----PRVN-----TQTHESFLQAIVDIGYLD---TKVDNISPM---DQHI 284
L +EI+ ++ RV T E + IV GY D +P+
Sbjct: 235 LSSEIIGVQTLKAGERVGYGGRYTARDEQRI-GIVAAGYADGYPRHAPTGTPVLVDGVRT 293

Query: 285 NILGA-SSDHLMLDLNGQGHYQVGD 308
+G S D L +DL +G
Sbjct: 294 MTVGTVSMDMLAVDLTPCPQAGIGT 318


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2210PF041832581e-80 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 258 bits (661), Expect = 1e-80
Identities = 92/456 (20%), Positives = 176/456 (38%), Gaps = 56/456 (12%)

Query: 166 EGHPTHPLTKTKLPLTMEEVRAYAPEFEKEIPLQIMMIEKDHVVCTAMDGND--QFIIDE 223
GHP K + E + YAPE+ L + ++++H++ + D Q +
Sbjct: 134 SGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHWLAVKREHMIWRCDNEMDIHQLLTAA 193

Query: 224 IIPEYYNQIRVFLKSLGLKSEDYRAILVHPWQYDHTIGKYFEAWIAKKILIPT-PFTILS 282
+ P+ + + + GL ++ + VHPWQ+ I F A A+ ++ F
Sbjct: 194 MDPQEFARFSQVWQENGL-DHNWLPLPVHPWQWQQKIATDFIADFAEGRMVSLGEFGDQW 252

Query: 283 KATLSFRTMSLIDKP--YHVKLPVDAQATSAVRTVSTVTTVDGPKLSYALQN-------- 332
A S RT++ + +KLP+ TS R + GP S LQ
Sbjct: 253 LAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATL 312

Query: 333 ------MLNQYPGFKVAMEPFGEYANVDKDRARQLACIIRQKPE--IDGKGATVVSASLV 384
+L + V+ E + A L I R+ P + + V+ A+L+
Sbjct: 313 VQSGAVILGEPAAGYVSHEGYAALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLM 372

Query: 385 NKNPIDQKVIVDSYLEWLNQGITKESITTFIERYAQALIPPLIAFIQNYGIALEAHMQNT 444
+ +Q + +Y++ G+ E+ ++ + + ++ PL + YG+AL AH QN
Sbjct: 373 ECDENNQPLA-GAYID--RSGLDAET---WLTQLFRVVVVPLYHLLCRYGVALIAHGQNI 426

Query: 445 VVNLGPHFDIQFLVRDLGGS-RI------DLETLQHRVSDI--KITNDSLIADSIDAVIA 495
+ + + L++D G R+ ++++L V D+ +++ D LI D
Sbjct: 427 TLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMDSLPQEVRDVTSRLSADYLIHDLQTGHFV 486

Query: 496 KFQHAVIQNQMAELIHHFNQYDCVEETELFNIVQQVVA--HAINPTLPHANELKDILFGP 553
I V E + ++ V++ +P + L LF P
Sbjct: 487 TV---------LRFISPLMVRLGVPERRFYQLLAAVLSDYMKKHPQMSERFALFS-LFRP 536

Query: 554 TITVKALLNMRM-----ENKVKQYLNI--ELDNPIK 582
I L +++ + + N +L NP+
Sbjct: 537 QIIRVVLNPVKLTWPDLDGGSRMLPNYLEDLQNPLW 572


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2211TCRTETA423e-06 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 41.7 bits (98), Expect = 3e-06
Identities = 53/340 (15%), Positives = 106/340 (31%), Gaps = 26/340 (7%)

Query: 6 FSSSFLLFLGNWIGQIGLNWFVLTTYHN--------AVYLGIVNFCRLVPILLLSVWAGA 57
S+ L +G IGL VL + GI+ + + GA
Sbjct: 11 LSTVALDAVG-----IGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGA 65

Query: 58 IADKYDKGRLLRITISSSFLVTAILCVLTYSFTAIPISVIIIYAT-LRGILSAVETPLRQ 116
++D++ + R + S A+ Y+ A + ++Y + ++ +
Sbjct: 66 LSDRFGR----RPVLLVSLAGAAV----DYAIMATAPFLWVLYIGRIVAGITGATGAVAG 117

Query: 117 AILPDLSDKISTTQAVSFHSFIINICRSIGPAIAGVILAVYHAPTTFLAQA--ICYFIAA 174
A + D++D + F S GP + G++ F A A F+
Sbjct: 118 AYIADITDGDERARHFGFMSACFGFGMVAGPVLGGLMGGFSPHAPFFAAAALNGLNFLTG 177

Query: 175 LLCLPLHFKVTKIPEDATRYMPLKVIIDYFKLHMEGRQIFITSLLIMATGFSYTTLLPVL 234
LP K + P PL + + + ++ G L +
Sbjct: 178 CFLLPESHKGERRPLRREALNPLASFRWARGMTVVA-ALMAVFFIMQLVGQVPAALWVIF 236

Query: 235 TNKVFPGKSEIFGIAMTMCAIGGIIATLVL-PKVLKYIGMVNMYYLSSLLFGIALLGVVF 293
F + GI++ I +A ++ V +G L + G + + F
Sbjct: 237 GEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGERRALMLGMIADGTGYILLAF 296

Query: 294 HNIVIMFICITLIGLFSQWARTTNRVYFQNNVKDYERGKV 333
M I ++ + V + +G++
Sbjct: 297 ATRGWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQL 336



Score = 30.6 bits (69), Expect = 0.012
Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 21/180 (11%)

Query: 10 FLLFLGNWIGQIGLNWFVLTTYH----NAVYLGI-VNFCRLVPILLLSVWAGAIADKYDK 64
+ F+ +GQ+ +V+ +A +GI + ++ L ++ G +A + +
Sbjct: 217 AVFFIMQLVGQVPAALWVIFGEDRFHWDATTIGISLAAFGILHSLAQAMITGPVAARLGE 276

Query: 65 GRLLRITISSSFLVTAILCVLTYSFTAIPISVIIIYATLRGILSAVETPLRQAILPDLSD 124
R L + + + +L T + A PI V++ + P QA+L D
Sbjct: 277 RRALMLGMIADGTGYILLAFATRGWMAFPIMVLLA-------SGGIGMPALQAMLSRQVD 329

Query: 125 KISTTQAVSFHSFIINICRSIGPAIAGVILAVYHAPT----TFLAQAICYFIAALLCLPL 180
+ Q + + ++ +GP + I A T ++A A Y LLCLP
Sbjct: 330 EERQGQLQGSLAALTSLTSIVGPLLFTAIYA-ASITTWNGWAWIAGAALY----LLCLPA 384


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2212PF041832702e-84 IucA / IucC family
		>PF04183#IucA / IucC family

Length = 580

Score = 270 bits (692), Expect = 2e-84
Identities = 93/475 (19%), Positives = 181/475 (38%), Gaps = 45/475 (9%)

Query: 195 SEQAVIEGHPLHPGAKLRKGLNALQTFLYSSEFNQPIKLKIVLIHSKLSRTMSLSKDYDT 254
Q ++ GHP K R+G Y+ E+ +L + + + M D +
Sbjct: 128 RLQCLLSGHPKFVFNKGRRGWGKEALERYAPEYANTFRLHWLAVKRE---HMIWRCDNEM 184

Query: 255 TVHQLF-----PDLIKQLENEFTPNFNFNDYHIMIVHPWQLDDVLHSDYQAEVDKELIIE 309
+HQL P + + N +++ + VHPWQ + +D+ A+ + ++
Sbjct: 185 DIHQLLTAAMDPQEFARFSQVWQENGLDHNWLPLPVHPWQWQQKIATDFIADFAEGRMVS 244

Query: 310 AKHTLD-YYAGLSFRTLVPKYPAMSPHIKLSTNVHITGEIRTLSEQTTHNGPLMTRILND 368
D + A S RTL IKL ++ T R + + GPL +R L
Sbjct: 245 LGEFGDQWLAQQSLRTLTNASRRGGLDIKLPLTIYNTSCYRGIPGRYIAAGPLASRWLQQ 304

Query: 369 ILEKDVIFKSYASTIIDEVAGIHFYNEQDEVDYQTER--SEQLGTLFRKNIYQMIPQEVT 426
+ D + I+ E A + +E + E LG ++R+N + + + +
Sbjct: 305 VFATDATLVQSGAVILGEPAAGYVSHEGYAALARAPYRYQEMLGVIWRENPCRWLKPDES 364

Query: 427 PMIPSSLVATYPFNNESPIVTLIKRYQSAASLSDFESSAKSWIETYSKALLGLVIPLVTK 486
P++ ++L+ N P+ A + A++W+ + ++ + L+ +
Sbjct: 365 PVLMATLMECDE--NNQPLA--------GAYIDRSGLDAETWLTQLFRVVVVPLYHLLCR 414

Query: 487 YGIALEAHLQNAIATFRKDGLLDTMYIRDFEG-LRIDKAQLNEMGYSTSHFHEKSRILTD 545
YG+AL AH QN I K+G+ + ++DF+G +R+ K + EM S E + +
Sbjct: 415 YGVALIAHGQN-ITLAMKEGVPQRVLLKDFQGDMRLVKEEFPEMD---SLPQEVRDVTSR 470

Query: 546 SKTSVFNKAFYSTVQNHLGELILTISKASNDSNLERHMWYIVRDVLDNIFDQLVLSTHKS 605
+ + I + ER + ++ VL + + H
Sbjct: 471 LSADYLIHDLQTGHFVTVLRFISPLMVRLGVP--ERRFYQLLAAVLSDYMKK-----HPQ 523

Query: 606 NQVNENRINEIKDTMFAPFIDYKCVTTMRLE----DEAHHY--TYIK-VNNPLYR 653
+ +F P I + ++L D Y++ + NPL+
Sbjct: 524 MSERFALFS-----LFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEDLQNPLWL 573


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2213TCRTETOQM290.012 Tetracycline resistance protein TetO/TetQ/TetM family ...
		>TCRTETOQM#Tetracycline resistance protein TetO/TetQ/TetM family

signature.
Length = 639

Score = 28.7 bits (64), Expect = 0.012
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 99 VDLKVILEYGE-----SAPKIFRKVTELVKEQVKYITGLDVVE 136
D K+ +YG S P FR + +V EQV G +++E
Sbjct: 495 TDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLE 537


41SaurJH9_2372SaurJH9_2385N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_2372012-1.244838hypothetical protein
SaurJH9_2373112-1.568865hypothetical protein
SaurJH9_237418-1.212727hypothetical protein
SaurJH9_2375-18-1.429101hypothetical protein
SaurJH9_2376-19-1.543443phospholipase D/transphosphatidylase
SaurJH9_2377-211-2.003074hypothetical protein
SaurJH9_2378-214-1.71084660 kDa inner membrane insertion protein
SaurJH9_2379-214-1.726913hypothetical protein
SaurJH9_2380-213-1.662166thiamine-phosphate pyrophosphorylase
SaurJH9_2381010-1.760756hydroxyethylthiazole kinase
SaurJH9_2382011-1.783432phosphomethylpyrimidine kinase
SaurJH9_2383-111-1.689658TenA family transcription regulator
SaurJH9_2384-111-0.991018transglycosylase domain-containing protein
SaurJH9_2385013-0.712893hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2372PF06438260.046 Heme acquisition protein HasAp
		>PF06438#Heme acquisition protein HasAp

Length = 205

Score = 26.5 bits (58), Expect = 0.046
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)

Query: 60 NLAYTLFTLEEHTTY--LSELSLGDVFT 85
+L YTLF+ HT + L ++LGD T
Sbjct: 72 DLHYTLFSNPSHTLWGKLDSIALGDTLT 99


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2376TCRTETB1582e-44 Tetracycline resistance protein TetB signature.
		>TCRTETB#Tetracycline resistance protein TetB signature.

Length = 458

Score = 158 bits (402), Expect = 2e-44
Identities = 92/415 (22%), Positives = 187/415 (45%), Gaps = 16/415 (3%)

Query: 140 KILAALLFGMFIAILNQTLLNVALPKINTEFNISASTGQWLMTGFMLVNGILIPITAYLF 199
+IL L F ++LN+ +LNV+LP I +FN ++ W+ T FML I + L
Sbjct: 14 QILIWLCILSFFSVLNEMVLNVSLPDIANDFNKPPASTNWVNTAFMLTFSIGTAVYGKLS 73

Query: 200 NKYSYRKLFLVALVLFTIGSLICAISMN-FPIMMVGRVLQAIGAGVLMPLGSIVIITIYP 258
++ ++L L +++ GS+I + + F ++++ R +Q GA L +V+ P
Sbjct: 74 DQLGIKRLLLFGIIINCFGSVIGFVGHSFFSLLIMARFIQGAGAAAFPALVMVVVARYIP 133

Query: 259 PEKRGAAMGTMGIAMILAPAIGPTLSGYIVQNYHWNVMFYGMFIIGIIAILVGFVWFKLY 318
E RG A G +G + + +GP + G I HW+ + +I II + K
Sbjct: 134 KENRGKAFGLIGSIVAMGEGVGPAIGGMIAHYIHWSYLLLIP-MITIITVPFLMKLLKKE 192

Query: 319 QYTTNPKADIPGIIFSTIGFGALLYGFSEAGNKGWGSVEIETMFAIGIIFIILFVIRELR 378
DI GII ++G + + + ++ ++FV +
Sbjct: 193 VRIKGH-FDIKGIILMSVGIVFFMLF---TTSYSIS------FLIVSVLSFLIFVKHIRK 242

Query: 379 MKSPMLNLEVLKFPTFTLTTIINMVVMLSLYGGMILLPIYLQNLRGFSALDSG-LLLLPG 437
+ P ++ + K F + + ++ ++ G + ++P ++++ S + G +++ PG
Sbjct: 243 VTDPFVDPGLGKNIPFMIGVLCGGIIFGTVAGFVSMVPYMMKDVHQLSTAEIGSVIIFPG 302

Query: 438 SLIMGLLGPFAGKLLDTIGLKPLAIFGIAVMTYATWELTKLNMDTP-YMTIMGIYVLRSF 496
++ + + G G L+D G + G+ ++ + + L T +MTI+ ++VL
Sbjct: 303 TMSVIIFGYIGGILVDRRGPLYVLNIGVTFLSVSFLTASFLLETTSWFMTIIIVFVL--G 360

Query: 497 GMAFIMMPMVTAAINALPGRLASHGNAFLNTMRQLAGSIGTAILVTVMTTQTTQH 551
G++F + T ++L + A G + LN L+ G AI+ +++
Sbjct: 361 GLSFTKTVISTIVSSSLKQQEAGAGMSLLNFTSFLSEGTGIAIVGGLLSIPLLDQ 415


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2377RTXTOXIND591e-12 Gram-negative bacterial RTX secretion protein D signat...
		>RTXTOXIND#Gram-negative bacterial RTX secretion protein D

signature.
Length = 478

Score = 59.1 bits (143), Expect = 1e-12
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 13/133 (9%)

Query: 87 MDLKMPQKGTIAKLD-GMEGSMVQAGNPIAYAYNLDD-LYVTANIDEKDIKDVEVGKDVD 144
++ P + +L EG +V + DD L VTA + KDI + VG++
Sbjct: 328 SVIRAPVSVKVQQLKVHTEGGVVTTAETLMVIVPEDDTLEVTALVQNKDIGFINVGQNAI 387

Query: 145 VTIDGQKAS----IKGKVDSIGKATAASFSLMPSSNSDGNYTKVSQVIPVKITLESEPSK 200
+ ++ + + GKV +I G V I +
Sbjct: 388 IKVEAFPYTRYGYLVGKVKNINLDAI-------EDQRLGLVFNVIISIEENCLSTGNKNI 440

Query: 201 QVVPGMNAEVKIH 213
+ GM +I
Sbjct: 441 PLSSGMAVTAEIK 453



Score = 32.5 bits (74), Expect = 0.001
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 9 VITVVVLLAIGIAGFYFWNKTTSYVTTDNAKV--NGDQIKIASPASGQIKSLNVKQGDKL 66
++ ++ + IA V T N K+ +G +I + +K + VK+G+ +
Sbjct: 59 LVAYFIMGFLVIAFILSVLGQVEIVATANGKLTHSGRSKEIKPIENSIVKEIIVKEGESV 118

Query: 67 DKGDKVATVTVQGQDGE 83
KGD + +T G + +
Sbjct: 119 RKGDVLLKLTALGAEAD 135


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2378HTHTETR454e-08 TetR bacterial regulatory protein HTH signature.
		>HTHTETR#TetR bacterial regulatory protein HTH signature.

Length = 215

Score = 44.6 bits (105), Expect = 4e-08
Identities = 13/69 (18%), Positives = 24/69 (34%)

Query: 2 KRQAKIEIQNALVDLMAEYPFQEISTKMICAYCNINRSTFYDYYKDKFDLLDTINSKHKE 61
++ + I + + L ++ S I + R Y ++KDK DL I +
Sbjct: 9 AQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEIWELSES 68

Query: 62 KFQFLLSAL 70
L
Sbjct: 69 NIGELELEY 77


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2379TCRTETA651e-13 Tetracycline resistance protein signature.
		>TCRTETA#Tetracycline resistance protein signature.

Length = 399

Score = 65.2 bits (159), Expect = 1e-13
Identities = 69/386 (17%), Positives = 141/386 (36%), Gaps = 16/386 (4%)

Query: 15 IIILGSLTAIGALSIDMFLPGLPDIRHDF---QTTTSNAQLTLSMFMIGLAFGNLFAGPI 71
+I++ S A+ A+ I + +P LP + D T++ + L+++ + G +
Sbjct: 7 LIVILSTVALDAVGIGLIMPVLPGLLRDLVHSNDVTAHYGILLALYALMQFACAPVLGAL 66

Query: 72 SDSTGRRKPLIIAMIIFTLASLGIVFVHNIWLMVALRFLQGVTGGAAAVISRAIASDMYS 131
SD GRR L++++ + + +W++ R + G+TG AV IA D+
Sbjct: 67 SDRFGRRPVLLVSLAGAAVDYAIMATAPFLWVLYIGRIVAGITGATGAVAGAYIA-DITD 125

Query: 132 GNELTKFMALLMLVNGIAPVVAPTIGGIILNYSVWRMVFVILTIFGFVMVIGSLLKVPES 191
G+E + + G V P +GG++ +S F + + +PES
Sbjct: 126 GDERARHFGFMSACFGFGMVAGPVLGGLMGGFSP-HAPFFAAAALNGLNFLTGCFLLPES 184

Query: 192 LTVTNRESSSGLKTMFKNFKILLKTPRFVLPMLIQGMTFVILFTYISASPFII--QKIYG 249
R +F+ + V ++ + L + A+ ++I + +
Sbjct: 185 HKGERRPLRREALNPLASFR-WARGMTVVAALMAVFFI-MQLVGQVPAALWVIFGEDRFH 242

Query: 250 MTAIQFSWMFAGIGITLIISSQLTGYLVDFIDSQKLMRGMTMIQIIGVILVTIVLLNHWN 309
A A GI ++ + + ++ R M+ +I I+L
Sbjct: 243 WDATTIGISLAAFGILHSLAQ---AMITGPVAARLGERRALMLGMIADGTGYILLAFATR 299

Query: 310 FWILAIGFIILIAPVTGVATLGFTIAMDESSSGRGSSSSLLGLVQFLFGGVASPLVGVKG 369
W+ ++L + G+ L ++ +G L + L + PL+
Sbjct: 300 GWMAFPIMVLLASGGIGMPALQAMLSRQVDEERQGQLQGSLAALTSL-TSIVGPLLFTAI 358

Query: 370 EDNPIPY---IIIIIATAVILIILQI 392
I I A+ L+ L
Sbjct: 359 YAASITTWNGWAWIAGAALYLLCLPA 384


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2383PF05272290.014 Virulence-associated E family protein
		>PF05272#Virulence-associated E family protein

Length = 892

Score = 29.3 bits (65), Expect = 0.014
Identities = 11/21 (52%), Positives = 14/21 (66%)

Query: 35 VILNGASGSGKTTLLTILGGL 55
V+L G G GK+TL+ L GL
Sbjct: 599 VVLEGTGGIGKSTLINTLVGL 619


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2385HTHFIS792e-19 FIS bacterial regulatory protein HTH signature.
		>HTHFIS#FIS bacterial regulatory protein HTH signature.

Length = 484

Score = 79.5 bits (196), Expect = 2e-19
Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 1/117 (0%)

Query: 5 LVVDDDPRILNYIASHLQTEHIDAYTQPSGEAALKLLEKQRVDIAVVDIMMDGMDGFQLC 64
LV DDD I + L D + + + D+ V D++M + F L
Sbjct: 7 LVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWIAAGDGDLVVTDVVMPDENAFDLL 66

Query: 65 NTLKN-DYDIPVIMLTARDALSDKERAFISGTDDYVTKPFEVKELIFRIRAVLRRYN 120
+K D+PV++++A++ +A G DY+ KPF++ ELI I L
Sbjct: 67 PRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIGIIGRALAEPK 123


42SaurJH9_2440SaurJH9_2450N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_2440-214-0.539908cation diffusion facilitator family transporter
SaurJH9_2441-117-0.809968hypothetical protein
SaurJH9_2442-118-0.906048hypothetical protein
SaurJH9_2443017-1.255117cof family hydrolase
SaurJH9_2444016-1.342090ABC transporter
SaurJH9_2445-115-1.787743glucosamine--fructose-6-phosphate
SaurJH9_2446-215-1.526264PTS system mannitol-specific transporter subunit
SaurJH9_2447-315-1.347541transcriptional antiterminator BglG
SaurJH9_2448-218-1.348552phosphoenolpyruvate-dependent sugar
SaurJH9_2449-216-1.813933mannitol-1-phosphate 5-dehydrogenase
SaurJH9_2450-214-2.019532cell wall anchor domain-containing protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2440TCRTETB1293e-35 Tetracycline resistance protein TetB signature.
		>TCRTETB#Tetracycline resistance protein TetB signature.

Length = 458

Score = 129 bits (327), Expect = 3e-35
Identities = 91/398 (22%), Positives = 177/398 (44%), Gaps = 14/398 (3%)

Query: 18 FFGLLNETLLVTALPSIMKDFEISYTQVQWLTTAFLLTNGIVIPLSALVIQRYTTRQVFL 77
FF +LNE +L +LP I DF W+ TAF+LT I + + + +++ L
Sbjct: 24 FFSVLNEMVLNVSLPDIANDFNKPPASTNWVNTAFMLTFSIGTAVYGKLSDQLGIKRLLL 83

Query: 78 VGISIFFLGTLLGGLS-PHFATLLVARIIQALGAGIMMPLMMTTILDVFQPHERGKYMGI 136
GI I G+++G + F+ L++AR IQ GA L+M + RGK G+
Sbjct: 84 FGIIINCFGSVIGFVGHSFFSLLIMARFIQGAGAAAFPALVMVVVARYIPKENRGKAFGL 143

Query: 137 FGLVIGLAPAIGPTLSGYLVEYLNWRSLFHVVAPIAAVTFLIGFKTIKNVGTTIKVPIDF 196
G ++ + +GP + G + Y++W L + P+ + + + IK D
Sbjct: 144 IGSIVAMGEGVGPAIGGMIAHYIHWSYLLLI--PMITIITVPFLMKLLKKEVRIKGHFDI 201

Query: 197 ISVIFSVLGFGGLLYGTSSISEKGFDNPIVLVSMIGGVVLVALFVLRQYRLSTPLLNFAV 256
+I +G + T+S S F +I V+ +FV +++ P ++ +
Sbjct: 202 KGIILMSVGIVFFMLFTTSYS-ISF--------LIVSVLSFLIFVKHIRKVTDPFVDPGL 252

Query: 257 FKNKQFTVGIIIMGVTMVSMIGSETILPIFVQNLLHRSALDSG-LTLLPGAIVMAFMSMT 315
KN F +G++ G+ ++ G +++P ++++ S + G + + PG + +
Sbjct: 253 GKNIPFMIGVLCGGIIFGTVAGFVSMVPYMMKDVHQLSTAEIGSVIIFPGTMSVIIFGYI 312

Query: 316 SGALYEKFGPRKLALVGMAIVVITTAYFVVMDEQTSTIMLATVYAIRMVGIALGLIPVMT 375
G L ++ GP + +G+ + ++ + E TS M + + G++ + T
Sbjct: 313 GGILVDRRGPLYVLNIGVTFLSVSFLTASFLLETTSWFMTIIIVFVLG-GLSFTKTVIST 371

Query: 376 HTMNQLKPEMNAHGSSMTNTVQQIAGSIGTAALITILS 413
+ LK + G S+ N ++ G A + +LS
Sbjct: 372 IVSSSLKQQEAGAGMSLLNFTSFLSEGTGIAIVGGLLS 409


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2445BICOMPNTOXIN427e-154 Staphylococcal bi-component toxin signature.
		>BICOMPNTOXIN#Staphylococcal bi-component toxin signature.

Length = 315

Score = 427 bits (1100), Expect = e-154
Identities = 213/312 (68%), Positives = 247/312 (79%), Gaps = 8/312 (2%)

Query: 13 MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGA--EIIKRTQDITSKRLAITQ 70
M+KNKILT TL+V L+APLANP +E +KA N EDIG+G+ EIIKRT+D TS + +TQ
Sbjct: 1 MLKNKILTTTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQ 60

Query: 71 NIQFDFVKDKKYNKDALVVKMQGFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNV 130
NIQFDFVKDKKYNKDAL++KMQGFISSRTTY + KK ++K M WPFQYNI LKT D V
Sbjct: 61 NIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTNDKYV 120

Query: 131 DLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNYSKTISYNQKNYVTEVESQ 190
LINYLPKNKI+S +VSQ LGYNIGGNFQSAPS+GG+GSFNYSK+ISY Q+NYV+EVE Q
Sbjct: 121 SLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSISYTQQNYVSEVEQQ 180

Query: 191 NSKGVKWGVKANSFVTPNGQVSAYDQYLF-AQDPTGPAARDYFVPDNQLPPLIQSGFNPS 249
NSK V WGVKANSF T +GQ SA+D LF P RDYFVPD++LPPL+QSGFNPS
Sbjct: 181 NSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPLVQSGFNPS 240

Query: 250 FITTLSHERGKGDKSEFEITYGRNMDATYA-----YVTRHRLAVDRKHDAFKNRNVTVKY 304
FI T+SHE+G D SEFEITYGRNMD T+A + L R H+AF NRN TVKY
Sbjct: 241 FIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAFVNRNYTVKY 300

Query: 305 EVNWKTHEVKIK 316
EVNWKTHE+K+K
Sbjct: 301 EVNWKTHEIKVK 312


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2446BICOMPNTOXIN469e-170 Staphylococcal bi-component toxin signature.
		>BICOMPNTOXIN#Staphylococcal bi-component toxin signature.

Length = 315

Score = 469 bits (1207), Expect = e-170
Identities = 314/315 (99%), Positives = 314/315 (99%)

Query: 1 MLKNKILATTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQ 60
MLKNKIL TTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQ
Sbjct: 1 MLKNKILTTTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQ 60

Query: 61 NIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTNDKYV 120
NIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTNDKYV
Sbjct: 61 NIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKTNDKYV 120

Query: 121 SLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSISYTQQNYVSEVEQQ 180
SLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSISYTQQNYVSEVEQQ
Sbjct: 121 SLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGGNGSFNYSKSISYTQQNYVSEVEQQ 180

Query: 181 NSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPLVQSGFNPS 240
NSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPLVQSGFNPS
Sbjct: 181 NSKSVLWGVKANSFATESGQKSAFDSDLFVGYKPHSKDPRDYFVPDSELPPLVQSGFNPS 240

Query: 241 FIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAFVNRNYTVKY 300
FIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAFVNRNYTVKY
Sbjct: 241 FIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHNAFVNRNYTVKY 300

Query: 301 EVNWKTHEIKVKGQN 315
EVNWKTHEIKVKGQN
Sbjct: 301 EVNWKTHEIKVKGQN 315


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2447BICOMPNTOXIN383e-136 Staphylococcal bi-component toxin signature.
		>BICOMPNTOXIN#Staphylococcal bi-component toxin signature.

Length = 315

Score = 383 bits (985), Expect = e-136
Identities = 87/322 (27%), Positives = 160/322 (49%), Gaps = 18/322 (5%)

Query: 1 MKMNKLVKSSVATSMALLLLSGTANAEGKITPVSVKKVDDKVTLYKTTATADSDKFKISQ 60
M NK++ ++++ S+ L + + + K T S+K+ ++Q
Sbjct: 1 MLKNKILTTTLSVSLLAPLANPLLENAKAANDTEDIGKGSDIEIIKRTEDKTSNKWGVTQ 60

Query: 61 ILTFNFIKDKSYDKDTLVLKATGNINSGFVKPNPNDYDFSK-LYWGAKYNVSISSQSNDS 119
+ F+F+KDK Y+KD L+LK G I+S N + K + W +YN+ + + ++
Sbjct: 61 NIQFDFVKDKKYNKDALILKMQGFISSRTTYYNYKKTNHVKAMRWPFQYNIGLKT-NDKY 119

Query: 120 VNVVDYAPKNQNEEFQVQNTLGYTFGGDISISNGLSGGLNGNTAFSETINYKQESYRTTL 179
V++++Y PKN+ E V TLGY GG+ + L G NG+ +S++I+Y Q++Y + +
Sbjct: 120 VSLINYLPKNKIESTNVSQTLGYNIGGNFQSAPSLGG--NGSFNYSKSISYTQQNYVSEV 177

Query: 180 SRNTNYKNVGWGVEAHKIMNNGWGPYGRDSFHPTYGNELFLAGRQSSAYAGQNFIAQHQM 239
+ N K+V WGV+A+ + ++LF+ + S F+ ++
Sbjct: 178 EQQ-NSKSVLWGVKANSFATESGQ-------KSAFDSDLFVGYKPHSKDPRDYFVPDSEL 229

Query: 240 PLLSRSNFNPEFLSVLSHRQDGAKKSKITVTYQREMDL-----YQIRWNGFYWAGANYKN 294
P L +S FNP F++ +SH + + S+ +TY R MD+ + Y G N
Sbjct: 230 PPLVQSGFNPSFIATVSHEKGSSDTSEFEITYGRNMDVTHAIKRSTHYGNSYLDGHRVHN 289

Query: 295 -FKTRTFKSTYEIDWENHKVKL 315
F R + YE++W+ H++K+
Sbjct: 290 AFVNRNYTVKYEVNWKTHEIKV 311


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2450CLENTEROTOXN280.047 Clostridium enterotoxin signature.
		>CLENTEROTOXN#Clostridium enterotoxin signature.

Length = 319

Score = 28.5 bits (63), Expect = 0.047
Identities = 8/47 (17%), Positives = 15/47 (31%), Gaps = 3/47 (6%)

Query: 233 GGVILSSND---VKDMLINHGRPLIYSSSLPIYNLYFIKRNIEKLIN 276
IL+ N+ L I + + FI+ ++E
Sbjct: 59 SSQILNPNETGTFSQSLTKSKEVSINVNFSVGFTSEFIQASVEYGFG 105


43SaurJH9_2594SaurJH9_2601N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_2594-116-0.049866hypothetical protein
SaurJH9_2595-216-0.369777CHAP domain-containing protein
SaurJH9_2596-3130.470110hypothetical protein
SaurJH9_2597-290.576311Na+/H+ antiporter NhaC
SaurJH9_2598-381.239641NAD/NADP octopine/nopaline dehydrogenase
SaurJH9_2599-3121.750324hypothetical protein
SaurJH9_2600-2131.575619CHAP domain-containing protein
SaurJH9_26010142.080433hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2594HTHTETR431e-07 TetR bacterial regulatory protein HTH signature.
		>HTHTETR#TetR bacterial regulatory protein HTH signature.

Length = 215

Score = 43.5 bits (102), Expect = 1e-07
Identities = 33/200 (16%), Positives = 64/200 (32%), Gaps = 34/200 (17%)

Query: 11 KSIDPRIVRTKQLLVDAFLKISREKKLSQITVKDITDIATLNRATFYAHFTDKEDLLDYT 70
+ T+Q ++D L++ ++ +S ++ +I A + R Y HF DK DL
Sbjct: 3 RKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEI 62

Query: 71 LSV---TILKDLNDNLSISNVINEKVLRNIFISIASYIKDAAKSCELNSEAFCNKAHQRI 127
+ I + + + VLR I I + + L F
Sbjct: 63 WELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVTEERRRLLMEIIF------HK 116

Query: 128 NNELEDIFAIM-LENSYPEHQRDIIVNS-------------------ASFLAAGISGLAL 167
+ ++ + + + D I + A + ISGL
Sbjct: 117 CEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMTRRAAIIMRGYISGLME 176

Query: 168 HWFNTSQ-----ETADVFID 182
+W Q + A ++
Sbjct: 177 NWLFAPQSFDLKKEARDYVA 196


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2597TRNSINTIMINR280.011 Translocated intimin receptor (Tir) signature.
		>TRNSINTIMINR#Translocated intimin receptor (Tir) signature.

Length = 549

Score = 28.2 bits (62), Expect = 0.011
Identities = 14/45 (31%), Positives = 23/45 (51%)

Query: 56 FQNVSQQSLNTEPNEVMISLGVNTNEEVDQLVNKVKEAGGAVVQE 100
F+N Q +N + N I G ++ V+Q+ + KEAG Q+
Sbjct: 291 FKNPENQKVNIDANGNAIPSGELKDDIVEQIAQQAKEAGEVARQQ 335


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2598NUCEPIMERASE362e-04 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 35.5 bits (82), Expect = 2e-04
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 35/138 (25%)

Query: 1 MKDILVIGATGKQGNAVVKQLLEDGWYVSAL--------TRNKNNRKLSDIGHPHLSIVE 52
MK LV GA G G V K+LLE G V + K R L + P +
Sbjct: 1 MK-YLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQAR-LELLAQPGFQFHK 58

Query: 53 GDLSD-----------------NVSLQSAMKGKYGLYSIQ-PIVKDDVSEELRQGMKIIE 94
DL+D + A++ YS++ P D + L + I+E
Sbjct: 59 IDLADREGMTDLFASGHFERVFISPHRLAVR-----YSLENPHAYADSN--LTGFLNILE 111

Query: 95 IAEQENIQHIVYSTAGGV 112
IQH++Y+++ V
Sbjct: 112 GCRHNKIQHLLYASSSSV 129


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2600HTHTETR622e-14 TetR bacterial regulatory protein HTH signature.
		>HTHTETR#TetR bacterial regulatory protein HTH signature.

Length = 215

Score = 62.3 bits (151), Expect = 2e-14
Identities = 25/80 (31%), Positives = 44/80 (55%)

Query: 1 MRKDAKENRQRIEEIAHKLFDEEGVENISMNRIAKELGIGMGTLYRHFKDKSDLCYYVIQ 60
+++A+E RQ I ++A +LF ++GV + S+ IAK G+ G +Y HFKDKSDL + +
Sbjct: 5 TKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFSEIWE 64

Query: 61 RDLDIFITHFKQIKDDYHSN 80
+ + + +
Sbjct: 65 LSESNIGELELEYQAKFPGD 84


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2601DHBDHDRGNASE724e-17 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase sig...
		>DHBDHDRGNASE#2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

signature.
Length = 261

Score = 71.6 bits (175), Expect = 4e-17
Identities = 48/197 (24%), Positives = 75/197 (38%), Gaps = 18/197 (9%)

Query: 3 KIVLITGGNKGLGYASAEALKALGYKVYIGSRND---VRGQQASQKLGVHYVQ--LDVTS 57
KI ITG +G+G A A L + G + N + + + H DV
Sbjct: 9 KIAFITGAAQGIGEAVARTLASQGAHIAAVDYNPEKLEKVVSSLKAEARHAEAFPADVRD 68

Query: 58 DYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLPPRDVEEVYQTNVFGIVRMMNTF 117
++ I + G +DIL+N AG+ + L + E + N G+ +
Sbjct: 69 SAAIDEITARIEREMGPIDILVNVAGVL-RPGLIHSLSDEEWEATFSVNSTGVFNASRSV 127

Query: 118 VPLLEKSEQPVVVNVSSGLGSFGMVTNPETAESKVNSLAYCSSKSAVTMLTLQYAKGLP- 176
+ +V V S P T+ + AY SSK+A M T L
Sbjct: 128 SKYMMDRRSGSIVTVGSNPAG-----VPRTSMA-----AYASSKAAAVMFTKCLGLELAE 177

Query: 177 -NMQINAADPGATNTDL 192
N++ N PG+T TD+
Sbjct: 178 YNIRCNIVSPGSTETDM 194


44SaurJH9_2654SaurJH9_2661N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_26540142.043505hypothetical protein
SaurJH9_2655-1110.184500alpha/beta hydrolase domain-containing protein
SaurJH9_2656-391.135437hypothetical protein
SaurJH9_2657-290.445522EmrB/QacA family drug resistance transporter
SaurJH9_2658-390.104669hypothetical protein
SaurJH9_2659-28-0.643601TetR family transcriptional regulator
SaurJH9_2660-290.599626Bcr/CflA subfamily drug resistance transporter
SaurJH9_2661-291.061051hypothetical protein
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2654PF05616512e-08 Neisseria meningitidis TspB protein
		>PF05616#Neisseria meningitidis TspB protein

Length = 501

Score = 50.9 bits (121), Expect = 2e-08
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 508 NVDPVTNRDYSIFGWNNENVVRYGGGSADGDSAVNPK-----DPTPG----PPVDPEPSP 558
N+ PVT+R+ N VV G + G++ V+ + D TPG P P P
Sbjct: 277 NMGPVTDRN-----GNPVQVVATFGRDSQGNTTVDVQVIPRPDLTPGSAEAPNAQPLPEV 331

Query: 559 DPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDSDSGSDSDSESDSDSDSDSDSDS 618
P P +P P+ +P P+P+PDPD + D++ +D G+ DS + D +
Sbjct: 332 SPAENPANNPAPNENPGTRPNPEPDPDLNPDANPDTDGQPGTRPDSPAVPDRPNGRHRKE 391

Query: 619 DSDSE 623
+ E
Sbjct: 392 RKEGE 396



Score = 35.1 bits (80), Expect = 0.001
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 538 DSAVNPK-DPTPGPPVDPEPSPDPEPEPTPDPEPSPDPEPEPSPDPDPDSDSDSDSGSDS 596
+ A NP + PG +PEP PD P+ PD + P P+ PD + +
Sbjct: 336 NPANNPAPNENPGTRPNPEPDPDLNPDANPDTDGQPGTRPDSPAVPDRPNGRHRKERKEG 395

Query: 597 DSG 599
+ G
Sbjct: 396 EDG 398


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2656CARBMTKINASE391e-139 Bacterial carbamate kinase signature.
		>CARBMTKINASE#Bacterial carbamate kinase signature.

Length = 314

Score = 391 bits (1006), Expect = e-139
Identities = 137/314 (43%), Positives = 198/314 (63%), Gaps = 5/314 (1%)

Query: 10 MKEKIVIALGGNAIQT--KEATAEAQQTAIRRAMQNLKPLFDSPARIVISHGNGPQIGSL 67
M +++VIALGGNA+Q ++ + E +R+ + + + +VI+HGNGPQ+GSL
Sbjct: 1 MGKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSL 60

Query: 68 LIQQAKSNSDT-TPAMPLDTCGAMSQGMIGYWLETEINRILTEMNSDRTVGTIVTRVEVD 126
L+ + PA P+D GAMSQG IGY ++ + L + ++ V TI+T+ VD
Sbjct: 61 LLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVD 120

Query: 127 KDDPRFNNPTKPIGPFYTKEEVEELQKEQPDSVFKEDAGRGYRKVVASPLPQSILEHQLI 186
K+DP F NPTKP+GPFY +E + L +E + KED+GRG+R+VV SP P+ +E + I
Sbjct: 121 KNDPAFQNPTKPVGPFYDEETAKRLARE-KGWIVKEDSGRGWRRVVPSPDPKGHVEAETI 179

Query: 187 RTLADGKNIVIACGGGGIPVIKKENTYEGVEAVIDKDFASEKLATLIEADTLMILTNVEN 246
+ L + IVIA GGGG+PVI ++ +GVEAVIDKD A EKLA + AD MILT+V
Sbjct: 180 KKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNG 239

Query: 247 VFINFNEPNQQQIDDIDVATLKKYAAQGKFAEGSMLPKIEAAIRFVESGENKKVIITNLE 306
+ + +Q + ++ V L+KY +G F GSM PK+ AAIRF+E G ++ II +LE
Sbjct: 240 AALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWG-GERAIIAHLE 298

Query: 307 QAYEALIGNKGTHI 320
+A EAL G GT +
Sbjct: 299 KAVEALEGKTGTQV 312


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2659ARGDEIMINASE5060.0 Bacterial arginine deiminase signature.
		>ARGDEIMINASE#Bacterial arginine deiminase signature.

Length = 409

Score = 506 bits (1305), Expect = 0.0
Identities = 193/409 (47%), Positives = 275/409 (67%), Gaps = 8/409 (1%)

Query: 5 PIKVNSEIGALKTVLLKRPGKELENLVPDYLDGLLFDDIPYLEVAQKEHDHFAQVLREEG 64
PI + SEIG LK VLL RPG+ELENL P + LFDDIPYLEVA++EH+ FA +L+
Sbjct: 7 PINIFSEIGRLKKVLLHRPGEELENLTPFIMKNFLFDDIPYLEVARQEHEVFASILKNNL 66

Query: 65 VEVLYLEKLAAESIENPQ-VRSEFIDDVLAESKKTILGHEEEIKTLFATLSNQELVDKIM 123
VE+ Y+E L +E + + + ++FI + E++ +K F++L+ ++ K++
Sbjct: 67 VEIEYIEDLISEVLVSSVALENKFISQFILEAEIKTDFTINLLKDYFSSLTIDNMISKMI 126

Query: 124 SGVRKEEINPKCTHLVEYMDDKYPFYLDPMPNLYFTRDPQASIGHGITINRMFWRARRRE 183
SGV EE+ + L + ++ F +DPMPN+ FTRDP ASIG+G+TIN+MF + R+RE
Sbjct: 127 SGVVTEELKNYTSSLDDLVNGANLFIIDPMPNVLFTRDPFASIGNGVTINKMFTKVRQRE 186

Query: 184 SIFIQYIVKHHPRFKDANIPIWLDRDCPFNIEGGDELVLSKDVLAIGVSERTSAQAIEKL 243
+IF +YI K+HP +K N+PIWL+R ++EGGDELVL+K +L IG+SERT A+++EKL
Sbjct: 187 TIFAEYIFKYHPVYK-ENVPIWLNRWEEASLEGGDELVLNKGLLVIGISERTEAKSVEKL 245

Query: 244 ARRIFENPQATFKKVVAIEIPTSRTFMHLDTVFTMIDYDKFTMHSAILKAEGNMNIFIIE 303
A +F+N + +F ++A +IP +R++MHLDTVFT IDY FT ++ + +I+++
Sbjct: 246 AISLFKN-KTSFDTILAFQIPKNRSYMHLDTVFTQIDYSVFTSFTSD---DMYFSIYVLT 301

Query: 304 YDDVNKDIAIK-QSSHLKDTLEDVLGIDDIQFIPTGNGDVIDGAREQWNDGSNTLCIRPG 362
Y+ + I IK + + +KD L LG I I GD+I GAREQWNDG+N L I PG
Sbjct: 302 YNPSSSKIHIKKEKARIKDVLSFYLG-RKIDIIKCAGGDLIHGAREQWNDGANVLAIAPG 360

Query: 363 VVVTYDRNYVSNDLLRQKGIKVIEISGSELVRGRGGPRCMSQPLFREDI 411
++ Y RN+V+N L + GIKV I SEL RGRGGPRCMS PL REDI
Sbjct: 361 EIIAYSRNHVTNKLFEENGIKVHRIPSSELSRGRGGPRCMSMPLIREDI 409


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2660ARGREPRESSOR827e-23 Bacterial arginine repressor signature.
		>ARGREPRESSOR#Bacterial arginine repressor signature.

Length = 149

Score = 82.2 bits (203), Expect = 7e-23
Identities = 38/147 (25%), Positives = 78/147 (53%), Gaps = 2/147 (1%)

Query: 1 MKKSKRLEIVSTIVKKHKIYKKEQIISYIEEYFGVRYSATTIAKDLKELNIYRVPIDCET 60
M K +R + I+ ++I +++++ +++ G + T+++D+KEL++ +VP + +
Sbjct: 1 MNKGQRHIKIREIITANEIETQDELVDILKKD-GYNVTQATVSRDIKELHLVKVPTNNGS 59

Query: 61 WIYKAINNQTEQEMREKFRHYCEHEVLSSIINGSYIIVKTSPGFAQGINYFIDQLNIEEI 120
+ Y ++ K + + I++KT PG AQ I +D L+ EEI
Sbjct: 60 YKY-SLPADQRFNPLSKLKRSLMDAFVKIDSASHLIVLKTMPGNAQAIGALMDNLDWEEI 118

Query: 121 LGTVSGNDTTLILTASNDMAEYVYAKL 147
+GT+ G+DT LI+ ++D + V K+
Sbjct: 119 MGTICGDDTILIICRTHDDTKVVQKKI 145


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2661THERMOLYSIN440e-152 Thermolysin metalloprotease (M4) family signature.
		>THERMOLYSIN#Thermolysin metalloprotease (M4) family signature.

Length = 544

Score = 440 bits (1133), Expect = e-152
Identities = 173/480 (36%), Positives = 249/480 (51%), Gaps = 42/480 (8%)

Query: 64 NIYQDYAVTDVKTDKKGFTHYTLQPSVDGVHAPDKEVKVHADKSGKVVLING----DTDA 119
+ ++ K D+ G T + ++ + H + G++ ++G + D
Sbjct: 71 QARERLSLIGNKLDELGHTVMRFEQAIAASLCMGAVLVAHVN-DGELSSLSGTLIPNLDK 129

Query: 120 KKVKPTNKVTLSKDDAADKAFKAVKIDKHKAKNLKDKVIKENKVEIDGDSNKYVYNVELI 179
+ +K +++ + + K A ++ K + ++ + D ++ + Y V +
Sbjct: 130 RTLKTEAAISIQQAEMIAKQDVADRVTKERPAA-EEGKPTRLVIYPDEETPRLAYEVNVR 188

Query: 180 TVTPEISHWKVKIDAQTGEILEKMNLVKEA-----------AETGKGKGVLGDTKDINI- 227
+TP +W IDA G++L K N + EA + G G+GVLGD K IN
Sbjct: 189 FLTPVPGNWIYMIDAADGKVLNKWNQMDEAKPGGAQPVAGTSTVGVGRGVLGDQKYINTT 248

Query: 228 -NSIDGGFSLEDLTHQGKLSAFSFNDQTG-QATLITNEDENFVKDEQRAGVDANYYAKQT 285
+S G + L+D T + + ++T +L + D F A VDA+YYA
Sbjct: 249 YSSYYGYYYLQDNTRGSGIFTYDGRNRTVLPGSLWADGDNQFFASYDAAAVDAHYYAGVV 308

Query: 286 YDYYKDTFGRESYDNQGSPIVSLTHVNNYGGQDNRNNAAWIGDKMIYGDGDGRTFTSLSG 345
YDYYK+ GR SYD + I S H YG NNA W G +M+YGDGDG+TF SG
Sbjct: 309 YDYYKNVHGRLSYDGSNAAIRSTVH---YG--RGYNNAFWNGSQMVYGDGDGQTFLPFSG 363

Query: 346 ANDVVAHELTHGVTQETANLEYKDQSGALNESFSDVFGYFVD-----DEDFLMGEDVYTP 400
DVV HELTH VT TA L Y+++SGA+NE+ SD+FG V+ + D+ +GED+YTP
Sbjct: 364 GIDVVGHELTHAVTDYTAGLVYQNESGAINEAMSDIFGTLVEFYANRNPDWEIGEDIYTP 423

Query: 401 GKEGDALRSMSNPEQFGQPAHMKDYVFTEKDNGGVHTNSGIPNKAAYNVIQ--------- 451
G GDALRSMS+P ++G P H +DNGGVHTNSGI NKAAY + Q
Sbjct: 424 GVAGDALRSMSDPAKYGDPDHYSKRYTGTQDNGGVHTNSGIINKAAYLLSQGGVHYGVSV 483

Query: 452 -AIGKSKSEQIYYRALTEYLTSNSNFKDCKDALYQAAKDLYDEQTAE--QVYEAWNEVGV 508
IG+ K +I+YRAL YLT SNF + A QAA DLY + E V +A+N VGV
Sbjct: 484 TGIGRDKMGKIFYRALVYYLTPTSNFSQLRAACVQAAADLYGSTSQEVNSVKQAFNAVGV 543


45SaurJH9_2667SaurJH9_2673N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_2667-190.075225hypothetical protein
SaurJH9_2668011-0.183366two component transcriptional regulator
SaurJH9_2669116-0.125441integral membrane sensor signal transduction
SaurJH9_2670-1140.196957hypothetical protein
SaurJH9_26710150.568959hypothetical protein
SaurJH9_2672013-0.026206hypothetical protein
SaurJH9_26736132.191219malate:quinone oxidoreductase
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2667ABC2TRNSPORT396e-05 ABC-2 type transport system membrane protein signat...
		>ABC2TRNSPORT#ABC-2 type transport system membrane protein

signature.
Length = 262

Score = 39.1 bits (91), Expect = 6e-05
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 28/172 (16%)

Query: 817 NKHKSLESVLTTRQVFLGKAGFFIMLGML-----QALIVSVGDLLILKAGVESP---VLF 868
++ E++L T Q+ LG I+LG + +A + G ++ A + +L+
Sbjct: 95 EGQRTWEAMLYT-QLRLGD----IVLGEMAWAATKAALAGAGIGVVAAALGYTQWLSLLY 149

Query: 869 VLITI-FCSIIFNSIVYTCVSLLGNPGKAIAIVLLVLQIAG----GGGTFPIQTTPQFFQ 923
L I + F S+ +L P I L I G FP+ P FQ
Sbjct: 150 ALPVIALTGLAFASLGMVVTAL--APSYDYFIFYQTLVITPILFLSGAVFPVDQLPIVFQ 207

Query: 924 NISPYLPFTYAIDSLRETV-----GGIVPEILITKLIILTLFGIGFFVVGLI 970
+ +LP +++ID +R + + + + I+ F F L+
Sbjct: 208 TAARFLPLSHSIDLIRPIMLGHPVVDVCQHVGALCIYIVIPF---FLSTALL 256


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2668FLGFLGJ645e-13 Flagellar protein FlgJ signature.
		>FLGFLGJ#Flagellar protein FlgJ signature.

Length = 313

Score = 63.6 bits (154), Expect = 5e-13
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 19/176 (10%)

Query: 304 SNNDDSGQFNVVDSKDTRQFVKSIAKDAHRIGQDNDIYASVMIAQAILESDSGRSALAKS 363
N DDS D++ F+ ++ A Q + + +++AQA LES G+ + +
Sbjct: 139 RNYDDSLPG------DSKAFLAQLSLPAQLASQQSGVPHHLILAQAALESGWGQRQIRRE 192

Query: 364 ---PNHNLFGIK--GAFEGNSVPFNTLEADGNKLYSINAGFRKYPSTKESLKDYSDLIKN 418
P++NLFG+K G ++G T E + + + A FR Y S E+L DY L+
Sbjct: 193 NGEPSYNLFGVKASGNWKGPVTEITTTEYENGEAKKVKAKFRVYSSYLEALSDYVGLLTR 252

Query: 419 GIDGNRTIYKPTWKSEADSYKDATSHLSKTYATDPNYAKKLNSIIKHYQLTQFDDE 474
+ + A + +DA YATDP+YA+KL ++I+ Q+ D+
Sbjct: 253 NPRYAAVTTAASAEQGAQALQDA------GYATDPHYARKLTNMIQ--QMKSISDK 300


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2669ISCHRISMTASE773e-19 Isochorismatase signature.
		>ISCHRISMTASE#Isochorismatase signature.

Length = 312

Score = 77.0 bits (189), Expect = 3e-19
Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 10/183 (5%)

Query: 3 RKTALLVLDMQE----GIASSVPRIKNIIKANQRAIEAARQHRIPVIFIRLVLDKHFNDV 58
+ LL+ DMQ + + + ++ Q IPV++ ++ +D
Sbjct: 29 NRAVLLIHDMQNYFVDAFTAGASPVTELSANIRKLKNQCVQLGIPVVYTAQPGSQNPDDR 88

Query: 59 SSSNKVFSTIKAQGYAITEADASTRILEDLAPLEDEPIISKRRFSAFTGSYLEVYLRAND 118
+ + G + +I+ +LAP +D+ +++K R+SAF + L +R
Sbjct: 89 ALLTDFW------GPGLNSGPYEEKIITELAPEDDDLVLTKWRYSAFKRTNLLEMMRKEG 142

Query: 119 INHLVLTGVSTSGAVLSTALESVDKDYYITVLEDAVGDRSDDKHDFIIEQILSRSCDIES 178
+ L++TG+ L TA E+ +D + DAV D S +KH +E R
Sbjct: 143 RDQLIITGIYAHIGCLVTACEAFMEDIKAFFVGDAVADFSLEKHQMALEYAAGRCAFTVM 202

Query: 179 VES 181
+S
Sbjct: 203 TDS 205


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2673SECA6560.0 SecA protein signature.
		>SECA#SecA protein signature.

Length = 901

Score = 656 bits (1695), Expect = 0.0
Identities = 287/835 (34%), Positives = 450/835 (53%), Gaps = 68/835 (8%)

Query: 10 NELRLKSIRKIVKRINTWSDEVKSYSDDALKQKTIEFKERLASGVDTLDTLLPEAYAVAR 69
N+ L+ +RK+V IN E++ SD+ LK KT EF+ RL G + L+ L+PEA+AV R
Sbjct: 14 NDRTLRRMRKVVNIINAMEPEMEKLSDEELKGKTAEFRARLEKG-EVLENLIPEAFAVVR 72

Query: 70 EASWRVLGMYPKEVQLIGAIVLHEGNIAEMQTGEGKTLTATMPLYLNALSGKGTYLITTN 129
EAS RV GM +VQL+G +VL+E IAEM+TGEGKTLTAT+P YLNAL+GKG +++T N
Sbjct: 73 EASKRVFGMRHFDVQLLGGMVLNERCIAEMRTGEGKTLTATLPAYLNALTGKGVHVVTVN 132

Query: 130 DYLAKRDFEEMQPLYEWLGLTASLGFVDIVDYEYQKGEKRNIYEHDIIYTTNGRLGFDYL 189
DYLA+RD E +PL+E+LGLT V I KR Y DI Y TN GFDYL
Sbjct: 133 DYLAQRDAENNRPLFEFLGLT-----VGINLPGMPAPAKREAYAADITYGTNNEYGFDYL 187

Query: 190 IDNLADSAEGKFLPQLNYGIIDEVDSIILDAAQTPLVISGAPRLQSNLFHIVKEFVDTLI 249
DN+A S E + +L+Y ++DEVDSI++D A+TPL+ISG S ++ V + + LI
Sbjct: 188 RDNMAFSPEERVQRKLHYALVDEVDSILIDEARTPLIISGPAEDSSEMYKRVNKIIPHLI 247

Query: 250 E-----------DVHFKMKKTKKEIWLLNQGIEAAQSYFNV-------EDLYSEQAMVLV 291
+ HF + + +++ L +G+ + E LYS ++L+
Sbjct: 248 RQEKEDSETFQGEGHFSVDEKSRQVNLTERGLVLIEELLVKEGIMDEGESLYSPANIMLM 307

Query: 292 RNINLALRAQYLFESNVDYFVYNGDIVLIDRITGRMLPGTKLQAGLHQAIEAKEGMEVST 351
++ ALRA LF +VDY V +G+++++D TGR + G + GLHQA+EAKEG+++
Sbjct: 308 HHVTAALRAHALFTRDVDYIVKDGEVIIVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQN 367

Query: 352 DKSVMATITFQNLFKLFESFSGMTATGKLGESEFFDLYSKIVVQAPTDKAIQRIDEPDKV 411
+ +A+ITFQN F+L+E +GMT T EF +Y V PT++ + R D PD V
Sbjct: 368 ENQTLASITFQNYFRLYEKLAGMTGTADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLV 427

Query: 412 FRSVDEKNIAMIHDIVELHETGRPVLLITRTAEAAEYFSKVLFQMDIPNNLLIAQNVAKE 471
+ + EK A+I DI E G+PVL+ T + E +E S L + I +N+L A+ A E
Sbjct: 428 YMTEAEKIQAIIEDIKERTAKGQPVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANE 487

Query: 472 AQMIAEAGQIGSMTVATSMAGRGTDIKLG-----------------------------EG 502
A ++A+AG ++T+AT+MAGRGTDI LG +
Sbjct: 488 AAIVAQAGYPAAVTIATNMAGRGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDA 547

Query: 503 VEALGGLAVIIHEHMENSRVDRQLRGRSGRQGDPGSSCIYISLDDYLVKRWSDSNLAENN 562
V GGL +I E E+ R+D QLRGRSGRQGD GSS Y+S++D L++ ++ ++
Sbjct: 548 VLEAGGLHIIGTERHESRRIDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMM 607

Query: 563 QLYSLDAQRLSQSNLFNRKVKQIVVKAQRISEEQGVKAREMANEFEKSISIQRDLVYEER 622
+ + + + + AQR E + R+ E++ + QR +Y +R
Sbjct: 608 RKLGMKPGEAIEHPWVTKAIA----NAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQR 663

Query: 623 NRVLEIDDAENRDFKALAKDVFEMFVNEE---KVLTKSRVVEYIYQNLSFQFNKDVACVN 679
N +L++ D ++ +DVF+ ++ + L + + + + L F+ D+
Sbjct: 664 NELLDVSDVSET-INSIREDVFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAE 722

Query: 680 FKDKQAVVT------FLLEQFEKQLALNRKNMQSAYYYNIFVQKVFLKAIDSCWLEQVDY 733
+ DK+ + +L Q + ++ + A F + V L+ +DS W E +
Sbjct: 723 WLDKEPELHEETLRERILAQSIEVYQ-RKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAA 781

Query: 734 LQQLKASVNQRQNGQRNAIFEYHRVALDSFEVMTRNIKKRMVKNICQSMITFDKE 788
+ L+ ++ R Q++ EY R + F M ++K ++ + + + +E
Sbjct: 782 MDYLRQGIHLRGYAQKDPKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEE 836


46SaurJH9_2677SaurJH9_2689N        Y        NPathogenicity Island (unbiased-composition)
LocusTagDNBiasCDNBias%GCBiasProduct
SaurJH9_267711152.961891hypothetical protein
SaurJH9_267812163.901126N-acetyltransferase GCN5
SaurJH9_2679-2151.196520quinone oxidoreductase , YhdH/YhfP
SaurJH9_2680-214-0.000141N-acetyltransferase GCN5
SaurJH9_2681-2150.065664FAD-dependent pyridine nucleotide-disulfide
SaurJH9_2682-2150.581415hypothetical protein
SaurJH9_2683-215-0.405793hypothetical protein
SaurJH9_2684-116-1.553894hypothetical protein
SaurJH9_2685-217-1.164486hypothetical protein
SaurJH9_2686-117-1.276379hypothetical protein
SaurJH9_2687-116-1.880960TetR family transcriptional regulator
SaurJH9_2688-114-3.519742Mg2+ transporter protein, CorA family protein
SaurJH9_2689-211-1.953996PTS system sucrose-specific transporter subunit
ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2677SECYTRNLCASE1304e-36 Preprotein translocase SecY subunit signature.
		>SECYTRNLCASE#Preprotein translocase SecY subunit signature.

Length = 437

Score = 130 bits (329), Expect = 4e-36
Identities = 93/440 (21%), Positives = 181/440 (41%), Gaps = 52/440 (11%)

Query: 4 LLQQYEYKIIYKRMLYTCFILFIYILGTNISI--VSYNDMQ------VKHESFFKIAISN 55
+ + + K++L+T I+ +Y +GT+I I V Y ++Q ++ F +
Sbjct: 5 FARAFRTPDLRKKLLFTLAIIVVYRVGTHIPIPGVDYKNVQQCVREASGNQGLFGLVNMF 64

Query: 56 MGGDVNTLNIFTLGLVPWLTSMIILMLISYRNMDKYMKQTSLEKHYKE------------ 103
GG + + IF LG++P++T+ IIL L++ + LE KE
Sbjct: 65 SGGALLQITIFALGIMPYITASIILQLLT-------VVIPRLEALKKEGQAGTAKITQYT 117

Query: 104 RILTLILSVIQSYFVIHEYVSKERVHQDN-------------IYLTILILVTGTMLLVWL 150
R LT+ L+++Q ++ S + + ++ + GT +++WL
Sbjct: 118 RYLTVALAILQGTGLVATARSAPLFGRCSVGGQIVPDQSIFTTITMVICMTAGTCVVMWL 177

Query: 151 ADKNSRYGIAGPMPIVMVSIIKSMMHQKMEYI------DASHIVIALLIILVIITLFILL 204
+ + GI M I+M I + + I I +I + +I + +++
Sbjct: 178 GELITDRGIGNGMSILMFISIAATFPSALWAIKKQGTLAGGWIEFGTVIAVGLIMVALVV 237

Query: 205 FIELVEVRIPYI----DLMNVSATNMKSYLSWKVNPAGSITLMMSISAFVFLKSGIHFIL 260
F+E + RIP + S +Y+ KVN AG I ++ + S F
Sbjct: 238 FVEQAQRRIPVQYAKRMIGRRSYGGTSTYIPLKVNQAGVIPVIFASSLLYIPALVAQFAG 297

Query: 261 SMFNKSISDDMPMLTFDSPVGISVYLVIQMLLGYFLSRFLINTKQKSKDFLKSGNYFSGV 320
+ + D P+ I Y ++ + +F N ++ + + K G + G+
Sbjct: 298 GNSGWKSWVEQNLTKGDHPIYIVTYFLLIVFFAFFYVAISFNPEEVADNMKKYGGFIPGI 357

Query: 321 KPGKDTERYLNYQARRVCWFGSALVTVIIGIPLYFTLFVPHLSTEIYFS-VQLIVLVYIS 379
+ G+ T YL+Y R+ W GS + +I +P L S F ++++V +
Sbjct: 358 RAGRPTAEYLSYVLNRITWPGSLYLGLIALVP-TMALVGFGASQNFPFGGTSILIIVGVG 416

Query: 380 INIAETIRTYLYFDKYKPFL 399
+ + I + L Y+ FL
Sbjct: 417 LETVKQIESQLQQRNYEGFL 436


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2678ICENUCLEATIN553e-09 Ice nucleation protein signature.
		>ICENUCLEATIN#Ice nucleation protein signature.

Length = 1258

Score = 55.1 bits (132), Expect = 3e-09
Identities = 237/1070 (22%), Positives = 425/1070 (39%), Gaps = 12/1070 (1%)

Query: 1098 SDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTSNSERTSTSVSD 1157
+ + ++ + S S + + T +T S ST ++ +
Sbjct: 106 LHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQTIEIATYG 165

Query: 1158 STSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQSASAFLSESLSE 1217
ST T +S I+ ST + + + S + ++ST + S ES
Sbjct: 166 STLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEESSQM 225

Query: 1218 STSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSE 1277
+ ST + S + S T+ S+ + ST + S+ T+ ST T +
Sbjct: 226 AGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKG 285

Query: 1278 SVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTSL 1337
S T+ ST T+ ++S+ ++ S T+ +S + ST + S + ST
Sbjct: 286 SDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGT 345

Query: 1338 SGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQ 1397
+G S + S+ + DS+ + S T+ S T+ S T+ + S +
Sbjct: 346 AGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYG 405

Query: 1398 SGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQ 1457
S + S + ST T++ S T+ Y S T+ +S+ + S T+ S+
Sbjct: 406 STQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLT 465

Query: 1458 SGSTSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSA 1517
+G ST + GS+ + S ST+ ES+ + S + S + ST + +
Sbjct: 466 AGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNE 525

Query: 1518 SASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSE 1577
S + STS + + S+ + S ++ S+ + ST + ST
Sbjct: 526 SDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGT 585

Query: 1578 SGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSD 1637
+GS S + ST T+ S T+ S + S T+ STS + + S +
Sbjct: 586 AGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYG 645

Query: 1638 SQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVM 1697
S + S T+ ST + SD T+ S ST+G+ S I+ ST T+ S +
Sbjct: 646 STQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGYNSILT 705

Query: 1698 SASISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESS 1757
+ S + S S S S + +DS ++G S + S T+ S +
Sbjct: 706 AGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGSTQTAREQ 765

Query: 1758 SLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTSTSTSGSLSTST 1817
S+ + S S + +DSS ++ S +++ S + S T+ S T+G STST
Sbjct: 766 SVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTTGYGSTST 825

Query: 1818 SLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQ 1877
+ + S ++ S + S T+ S + S + STS + DS ++
Sbjct: 826 AGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDSSLIAGYG 885

Query: 1878 SMSGSESTSTSVSDSQSSSTSNSQFDSMSISASESDSMSTSDSSNISGSNSTSTSLSTSD 1937
S + S + S+ T+ D + S S + S GS T++ ST
Sbjct: 886 STQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQTASFKSTLM 945

Query: 1938 SMSGSVSVSTSTSLSDSISGSTSVSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSIST 1997
+ GS + S + GSTS++ S+ + S + QST T+ GS T+ +
Sbjct: 946 AGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGYGSTQTAEHS 1005

Query: 1998 SMSMSASTSSSQSTSVSTSLSTSDSISDST----------SISISGSQSTVESESTSDST 2047
S + S++ + + S+ ++ S S S ISG +S + + S
Sbjct: 1006 STLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVLTAGYGSSLI 1065

Query: 2048 SISDSESLSTSDSDSTSTSTSDSTSGSTSTSIS--ESLSTSGSGSTSVSDSTSMSESDST 2105
S S + S+ ++ S +G ST I+ S+ +G GS+ + S S +
Sbjct: 1066 SGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNRSMLIAGKGSSQTAGYRSTLISGAD 1125

Query: 2106 SVSMSQDKSDSTSISDSESVSTSTSTSLSTSDSTSTSESLSTSMSGSQSI 2155
SV M+ ++ + +DS + S L+ ++S T+ S +G+ I
Sbjct: 1126 SVQMAGERGKLIAGADSTQTAGDRSKLLAGNNSYLTAGDRSKLTAGNDCI 1175



Score = 53.2 bits (127), Expect = 1e-08
Identities = 176/773 (22%), Positives = 305/773 (39%), Gaps = 2/773 (0%)

Query: 1408 SASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQSGSTSTSASL 1467
+ + +E + S + + T D+T S ST + + +
Sbjct: 106 LHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQTIEIATYG 165

Query: 1468 SGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSASASESDSSST 1527
S SQ I+ S T+ +ST ++ ST +G+ ST + S + +SS
Sbjct: 166 STLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTAGEESSQM 225

Query: 1528 SLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTSESTSE 1587
+ ST M+ S+ + S + S+ + ST + S T+ GST +
Sbjct: 226 AGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKG 285

Query: 1588 SDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQSMSLSTST 1647
SD T+ S + + S+ +G ST T+ +S T+ ST SD + ST T
Sbjct: 286 SDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGT 345

Query: 1648 STSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVMSASISDSQSM 1707
+ S + S + DS+ + GS + SD T+ S + S +
Sbjct: 346 AGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYG 405

Query: 1708 SESVNDSESVSESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSD 1767
S ES + S + GS + GS + + S+ +G S
Sbjct: 406 STQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLT 465

Query: 1768 SVSTSDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGSESVSE 1827
+ S ++ S S S + S + GST T+ GS T+ S + +E
Sbjct: 466 AGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQTAQNE 525

Query: 1828 STSLSDSISMSDSTSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGSESTST 1887
S ++ S S + + S + GS + S+ T+ S + S +G ST T
Sbjct: 526 SDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGYGSTGT 585

Query: 1888 SVSDSQSSSTSNSQFDSMSISASESDSMSTSDSSNISGSNSTSTSLSTSDSMSGSVSVST 1947
+ SDS + S + S+ + ST + S + S ST+ + S ++
Sbjct: 586 AGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYG 645

Query: 1948 STSLSDSISGSTSVSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSISTSMSMSASTSS 2007
ST + S T+ S+ T+ S + S ST+ + S ++ ST + S +
Sbjct: 646 STQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGYNSILT 705

Query: 2008 SQSTSVSTSLSTSDSISDSTSISISGSQSTVESESTSDSTSISDSESLSTSDSDSTSTST 2067
+ S T+ SD S S S +G+ S++ + S T+ S + S T+
Sbjct: 706 AGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGSTQTAREQ 765

Query: 2068 SDSTS--GSTSTSISESLSTSGSGSTSVSDSTSMSESDSTSVSMSQDKSDSTSISDSESV 2125
S T+ GSTST+ ++S +G GST + S+ + S +Q++SD T+ S S
Sbjct: 766 SVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTTGYGSTST 825

Query: 2126 STSTSTSLSTSDSTSTSESLSTSMSGSQSISDSTSTSMSGSTSTSESNSMHPS 2178
+ + S+ ++ ST T+ S +G S + S + S S + + S
Sbjct: 826 AGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDS 878



Score = 53.2 bits (127), Expect = 1e-08
Identities = 233/1050 (22%), Positives = 411/1050 (39%), Gaps = 2/1050 (0%)

Query: 759 TSGSTQQSQSVSTSKADSQSASTSTSGSIVVSTSASTSKSTSVSLSDSVSASKSLSTSES 818
TS + A ++ + S + D+ S S +++
Sbjct: 99 TSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQT 158

Query: 819 NSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNSNSTEKSESLSTSTSDSLRTSTS 878
+++ ST QS + GS + S I+ ST + + ST + T T+
Sbjct: 159 IEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTA 218

Query: 879 LSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTSNAISTSTSLSESASTSDSISIS 938
+S M+ GS S +G ST + DS+ A ST + S+ + S
Sbjct: 219 GEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 278

Query: 939 NSIANSQSASTSKSDSQSTSISLSTSDSKSMSTSESLSDSTSTSGSVSGSLSIAASQSVS 998
A S T+ S T+ + S+ + ST + +ST T+G GS A S
Sbjct: 279 TQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGY--GSTQTAQKGSDL 336

Query: 999 TSTSDSMSTSEIVSDSISTSGSLSASDSKSMSVSSSMSTSQSGSTSESLSDSQSTSDSDS 1058
T+ S T+ S I+ GS + S + ST + S+ + ST + +
Sbjct: 337 TAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGA 396

Query: 1059 KSLSLSTSQSGSTSTSTSTSASVRTSESQSTSGSMSASQSDSMSISTSFSDSTSDSKSAS 1118
S ++ S T+ ST + S + GS + S + S + S
Sbjct: 397 DSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQ 456

Query: 1119 TASSESISQSASTSTSGSVSTSTSLSTSNSERTSTSVSDSTSLSTSESDSISESTSTSDS 1178
TA +S + ST + S + S T+ S + S + ST T+
Sbjct: 457 TAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGY 516

Query: 1179 ISEAISASESTSISLSESNSTSDSESQSASAFLSESLSESTSESTSESVSSSTSESTSLS 1238
S + +ES I+ S ST+ + S + + S + S T+ S+ T+ S
Sbjct: 517 GSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDL 576

Query: 1239 DSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSESVSTSLSMSTSTSLSNSTSLS 1298
+ S T+ S S+ +G S T++ S T+ + S + S+ T+ S ST+ +
Sbjct: 577 TAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGA 636

Query: 1299 TSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTSLSGSTSESESDSTSSSESKSDS 1358
S + S + S+ T+ ST + S T+ GSTS + +DS+ + S
Sbjct: 637 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQ 696

Query: 1359 TSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTS 1418
T+ S+ + GST T+ S S S S + + + S ++ +S+ T+
Sbjct: 697 TAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGY 756

Query: 1419 ESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQSGSTSTSASLSGSESESDSQS 1478
S + + S ST+ + S + S T+ S T+ S ++ S
Sbjct: 757 GSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDL 816

Query: 1479 ISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSASASESDSSSTSLSDSTSASMQ 1538
+ S ST+ + S+ ++ ST +G S T+ S ++ +S T+ STS +
Sbjct: 817 TTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGY 876

Query: 1539 SSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTSESTSESDSTSTSLSDS 1598
S + S + S T+ ST + S T+ GSTS + ES + S
Sbjct: 877 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQ 936

Query: 1599 QSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLS 1658
++ +ST +G S+ T+ S T+ STSM S + ST T+ S T+
Sbjct: 937 TASFKSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGY 996

Query: 1659 DSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVS 1718
S + ST + GS + + + S + S+ S + S ++ SV
Sbjct: 997 GSTQTAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVL 1056

Query: 1719 ESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLS 1778
+ S S S+ + GS +++ + ES+ ++G++SM + S ++
Sbjct: 1057 TAGYGSSLISGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNRSMLIAGKGSSQTAGY 1116

Query: 1779 VSTSLRSSESVSESDSLSDSKSTSGSTSTS 1808
ST + ++SV + + + ST T+
Sbjct: 1117 RSTLISGADSVQMAGERGKLIAGADSTQTA 1146



Score = 52.8 bits (126), Expect = 2e-08
Identities = 229/1007 (22%), Positives = 395/1007 (39%), Gaps = 10/1007 (0%)

Query: 1163 TSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQSASAFLSESLSESTSES 1222
TS I + + +E + S ++ ES S +++
Sbjct: 99 TSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQT 158

Query: 1223 TSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKSESVSTS 1282
+ ST T S + GST T+ +ST + ST T+ ++ST S T+
Sbjct: 159 IEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTA 218

Query: 1283 LSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTSLSGSTS 1342
S+ + ST SD T+ S + S+ + S + S+ +G S
Sbjct: 219 GEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 278

Query: 1343 ESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMNQSGVDS 1402
+ S + ST + + S +G ST T+ S T+ S + S + +
Sbjct: 279 TQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTA 338

Query: 1403 NSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTSQSGSTS 1462
S + S+ + S T+ S T+ ST T+ SD T+ GST
Sbjct: 339 GYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTA------GYGSTG 392

Query: 1463 TSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGSASTSTSLSNSASASES 1522
T+ + S + S + S T+ ST + S +G ST T+ +S+ +
Sbjct: 393 TAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGY 452

Query: 1523 DSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVSTSESGSTS 1582
S+ T+ DS+ + S +Q S + STST+ S++ ++ ST +G S
Sbjct: 453 GSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSL--IAGYGSTQTAGYGS 510

Query: 1583 ESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTSTSDSQSMS 1642
T+ ST T+ ++S + S S + + S+ + ST ++ S+ T+ S +
Sbjct: 511 TLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTA 570

Query: 1643 LSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVSISLSDSTSTSTSASEVMSASIS 1702
S T+ ST + S S + S T+ S + ST T+ S + + S
Sbjct: 571 REGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGS 630

Query: 1703 DSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSGSLSVSTSLRKSESVSESSSLSGS 1762
S + ++S + S + +S +G S + S T+ S S + + S +
Sbjct: 631 TSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIA 690

Query: 1763 QSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSKSTSGSTSTSTSGSLSTSTSLSGS 1822
S + +S + S ++++ S+ S S ST+G+ S+ +G ST T+ S
Sbjct: 691 GYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHS 750

Query: 1823 ESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGSTSLSTSDSLSDSKSLSSSQSMSGS 1882
+ S + S T+ S S +G+ S + ST + S + S +
Sbjct: 751 SLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTA 810

Query: 1883 ESTSTSVSDSQSSSTSNSQFDSMSISASESDSMSTSDSSNISGSNSTSTSLSTSDSMSGS 1942
+ S + S+ST+ DS I+ S + +S +G ST T+ SD +G
Sbjct: 811 QERSDLTTGYGSTSTAG--ADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGY 868

Query: 1943 VSVSTSTSLSDSISGSTSVSDSSSTSTSTSLSDSMSQSQSTSTSASGSLSTSISTSMSMS 2002
S ST+ S I+G S + S T+ S +Q S +G STS + S
Sbjct: 869 GSTSTAGYDSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSL 928

Query: 2003 ASTSSSQSTSVSTSLSTSDSISDSTSISISGSQSTVESESTSDSTSISDSESLSTSDSDS 2062
+ S T+ S + S T+ S + S S + S + ST +
Sbjct: 929 IAGYGSTQTASFKSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGY 988

Query: 2063 TSTSTSDSTSGSTSTSISESLSTSGSGSTSVSDSTSMSESDSTSVSMSQDKSDSTSISDS 2122
ST T+ S T+ S + GS +T+ +DS+ ++ S+ S + + S
Sbjct: 989 QSTLTAGYGSTQTAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTL 1048

Query: 2123 ESVSTSTSTSLSTSDSTSTSESLSTSMSGSQSISDSTSTSMSGSTST 2169
S S T+ S S S T+ GS I+ S+ ++G ST
Sbjct: 1049 ISGLRSVLTAGYGSSLISGRRSSLTAGYGSNQIASHRSSLIAGPEST 1095



Score = 52.1 bits (124), Expect = 3e-08
Identities = 193/856 (22%), Positives = 350/856 (40%), Gaps = 14/856 (1%)

Query: 1329 DSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTS 1388
S + ++ + + + S + + + + T +T S ST +
Sbjct: 97 TKTSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPT 156

Query: 1389 LSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDS 1448
++ + S + SQ + ST T+ S + Y S T+ ++ST + S
Sbjct: 157 QTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQ 216

Query: 1449 TSISKSTSQSGSTSTSASLSGSESESDSQSISTSASEST--SESASTSLSDSTSTSNSGS 1506
T+ +S+ +G ST + GS+ + S T+ +S+ + ST + S+ +G
Sbjct: 217 TAGEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGY 276

Query: 1507 ASTSTSLSNSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTI 1566
ST T+ S + S+ T+ +DS+ + S + S + ST T+ + S +
Sbjct: 277 GSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDL 336

Query: 1567 ASLSTSVSTSESGST------SESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDS 1620
+ S T+ S+ S T+ DS+ T+ S T++ S + ST T+ +
Sbjct: 337 TAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGA 396

Query: 1621 RSTSASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVS 1680
S+ + S +T+ +S + ST T+ S + S T+ S+ +G S
Sbjct: 397 DSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQ 456

Query: 1681 ISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDSGS 1740
+ DS+ T+ S + SD + S + + S + S +G S +G
Sbjct: 457 TAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGY 516

Query: 1741 LSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDSKS 1800
S T+ +S+ ++ S S + + S ++ S+ + S+ ++ S + S
Sbjct: 517 GSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDL 576

Query: 1801 TSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGSTS 1860
T+G ST T+GS S+ + GS + S + S T+ S +G S S + +
Sbjct: 577 TAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGA 636

Query: 1861 LST------SDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDSMSISASESDS 1914
S+ S + S+ ++ S + S + STS + DS I+ S
Sbjct: 637 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQ 696

Query: 1915 MSTSDSSNISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGSTSVSDSSSTSTSTSLS 1974
+ +S +G ST T+ SD SG S ST+ + S I+G S +S S+ T+
Sbjct: 697 TAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGY 756

Query: 1975 DSMSQSQSTSTSASGSLSTSISTSMSMSASTSSSQSTSVSTSLSTSDSISDSTSISISGS 2034
S ++ S +G STS + + S + S T+ S+ T+ S T+ S
Sbjct: 757 GSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDL 816

Query: 2035 QSTVESESTSDSTSISDSESLSTSDSDSTSTSTSDSTSGSTSTSISESLSTSGSGSTSVS 2094
+ S ST+ + S + ST + S T+ S T+ S+ + GS ST+
Sbjct: 817 TTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGY 876

Query: 2095 DSTSMSESDSTSVSMSQDKSDSTSISDSESVSTSTSTSLSTSDSTSTSESLSTSMSGSQS 2154
DS+ ++ ST + + S + S T+ S ST+ ES + GS
Sbjct: 877 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQ 936

Query: 2155 ISDSTSTSMSGSTSTS 2170
+ ST M+G S+
Sbjct: 937 TASFKSTLMAGYGSSQ 952



Score = 51.3 bits (122), Expect = 5e-08
Identities = 200/886 (22%), Positives = 350/886 (39%), Gaps = 6/886 (0%)

Query: 797 KSTSVSLSDSVSASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDSISNS 856
++ + + SA + + ++ V+ + + S V+S + D +
Sbjct: 89 RAEVLHVGTKTSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATI 148

Query: 857 NSTEKSESLSTSTSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLSDSTS 916
S + + + T + S ++ GS + ST I+G ST + +DST
Sbjct: 149 ESGSTQPTQTIEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTL 208

Query: 917 NAISTSTSLSESASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDSKSMSTSESLS 976
A ST + S+ + S S T+ S T+ S+ + ST +
Sbjct: 209 VAGYGSTQTAGEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGE 268

Query: 977 DSTSTSGSVSGSLSIAASQSVSTSTSDSMSTSEIVSDSISTSGSLSASDSKSMSVSSSMS 1036
DS+ T+G S + S + S + ++ + S + +S + S
Sbjct: 269 DSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQ 328

Query: 1037 TSQSGSTSESLSDSQSTSDSDSKSLSLSTSQSGSTSTSTSTSASVRTSESQSTSGSMSAS 1096
T+Q GS + S T+ DS + + GST T+ S+ S T+ S
Sbjct: 329 TAQKGSDLTAGYGSTGTAGDDSSLI----AGYGSTQTAGEDSSLTAGYGSTQTAQKGSDL 384

Query: 1097 QSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTSNSERTSTSVS 1156
+ S T+ +DS+ + ST ++ S + S + S T+ T T+
Sbjct: 385 TAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGD 444

Query: 1157 DSTSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQSASAFLSESLS 1216
DS+ ++ S + S+ + + ++ S + STS + +S+ S
Sbjct: 445 DSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQ 504

Query: 1217 ESTSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTSISESTSTFKS 1276
+ ST + ST + + SD + GSTST+ +NS+ + ST T+ S T
Sbjct: 505 TAGYGSTLTAGYGSTQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGY 564

Query: 1277 ESVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTSKSDSISTSTS 1336
S T+ S T+ ST + S S + S ++ S+ + S + S
Sbjct: 565 GSTQTAREGSDLTAGYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVL 624

Query: 1337 LSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTSTSLSLSASMN 1396
+G S S + + SS + ST + S T+G ST T+ SD T+ S S +
Sbjct: 625 TTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGA 684

Query: 1397 QSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLSDSTSISKSTS 1456
S + + S + S T+ S T+ S TS STST+ + S + ST
Sbjct: 685 DSSLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQ 744

Query: 1457 QSGSTSTSASLSGSESESDSQSISTS--ASESTSESASTSLSDSTSTSNSGSASTSTSLS 1514
+ S+ + GS + QS+ T+ S ST+ + S+ ++ ST +G S T+
Sbjct: 745 TASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGY 804

Query: 1515 NSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTIASLSTSVS 1574
S ++ S T+ STS + S + S + S T+ ST + S
Sbjct: 805 GSTQTAQERSDLTTGYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDL 864

Query: 1575 TSESGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDSRSTSASTSTSMRTS 1634
T+ GSTS + +S + S + S +G ST T+ +S T+ STS
Sbjct: 865 TTGYGSTSTAGYDSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGY 924

Query: 1635 TSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMSVS 1680
S + ST T++ S + S + S+ + GS S++
Sbjct: 925 ESSLIAGYGSTQTASFKSTLMAGYGSSQTAREQSSLTAGYGSTSMA 970



Score = 49.0 bits (116), Expect = 3e-07
Identities = 206/894 (23%), Positives = 361/894 (40%), Gaps = 6/894 (0%)

Query: 733 TDASGNKTTTTFKYEVTRNSMSDSVSTSGSTQQSQSVSTSKADSQSASTSTSGSIVVSTS 792
T G+ T + T + S ++ GSTQ + ST A S T+ GS + +
Sbjct: 281 TAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGY 340

Query: 793 ASTSKSTSVSLSDSVSASKSLSTSESNSVSSSTSTSLVNSQSVSSSMSGSVSKSTSLSDS 852
ST + S + S + +S+ + ST S ++ GS + + S
Sbjct: 341 GSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADSSL 400

Query: 853 ISNSNSTEKSESLSTSTSDSLRTSTSLSDSLSMSTSGSLSKSQSLSTSISGSSSTSASLS 912
I+ ST+ + ST T+ T T+ S + GS + S+ I+G ST +
Sbjct: 401 IAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGE 460

Query: 913 DSTSNAISTSTSLSESASTSDSISISNSIANSQSA------STSKSDSQSTSISLSTSDS 966
DS+ A ST ++ S + S S A +S+ ST + ST + S
Sbjct: 461 DSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGSTQ 520

Query: 967 KSMSTSESLSDSTSTSGSVSGSLSIAASQSVSTSTSDSMSTSEIVSDSISTSGSLSASDS 1026
+ + S+ ++ STS + + S IA S T++ +S+ T+ S + GS +
Sbjct: 521 TAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTAGY 580

Query: 1027 KSMSVSSSMSTSQSGSTSESLSDSQSTSDSDSKSLSLSTSQSGSTSTSTSTSASVRTSES 1086
S + S S+ +G S + S+ + S + QS T+ STS + S
Sbjct: 581 GSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADSSL 640

Query: 1087 QSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTS 1146
+ GS + +S+ + S T+ S TA S S + + S+ + ST +
Sbjct: 641 IAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTAGY 700

Query: 1147 NSERTSTSVSDSTSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQS 1206
NS T+ S T+ S+ S STST+ + S I+ ST + S+ T+ S
Sbjct: 701 NSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGSTQ 760

Query: 1207 ASAFLSESLSESTSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTS 1266
+ S + S ST+ + SS + S + S T+ S T+ S T+
Sbjct: 761 TAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTTGY 820

Query: 1267 ISESTSTFKSESVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMSTSDSISTS 1326
S ST+ S ++ S T+ S T+ S + +S + S ST+ S+
Sbjct: 821 GSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDSSL 880

Query: 1327 KSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTSTSTSLSDSTS 1386
+ ST T+ S + ST +++ SD T+ S S + S+ + S ++
Sbjct: 881 IAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQTASF 940

Query: 1387 TSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSESTSTSTSLS 1446
S ++ + S+ + STS + +S + T + QS T+ S
Sbjct: 941 KSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGYGSTQ 1000

Query: 1447 DSTSISKSTSQSGSTSTSASLSGSESESDSQSISTSASESTSESASTSLSDSTSTSNSGS 1506
+ S T+ GST+T+ + S + S S S T+ ST +S S +G
Sbjct: 1001 TAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVLTAGY 1060

Query: 1507 ASTSTSLSNSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTSTSNRMSTI 1566
S+ S S+ + S+ + S+ + S + + S ++ S+ T+ ST+
Sbjct: 1061 GSSLISGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNRSMLIAGKGSSQTAGYRSTL 1120

Query: 1567 ASLSTSVSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTSDS 1620
S + SV + + ++S T+ S + + S +G S T+ +D
Sbjct: 1121 ISGADSVQMAGERGKLIAGADSTQTAGDRSKLLAGNNSYLTAGDRSKLTAGNDC 1174



Score = 47.8 bits (113), Expect = 6e-07
Identities = 241/1091 (22%), Positives = 433/1091 (39%), Gaps = 10/1091 (0%)

Query: 907 TSASLSDSTSNAISTSTSLSESASTSDSISISNSIANSQSASTSKSDSQSTSISLSTSDS 966
TSA A + + ++ S ++ + N T D+ S S + +
Sbjct: 99 TSAMQFILHHRADYVACTEMQAGPGSPDVTSEVKVGNRSLPVTDDIDATIESGSTQPTQT 158

Query: 967 KSMSTSESLSDSTSTSGSVSGSLSIAASQSVSTSTSDSMSTSEIVSDSISTSGSLSASDS 1026
++T S T S ++G S + ST + ST +DS +G S +
Sbjct: 159 IEIATYGSTLSGTHQSQLIAGYGSTETAGDSSTLIAGYGSTGTAGADSTLVAGYGSTQTA 218

Query: 1027 KSMSVSSSMSTSQSGSTSESLSDSQSTSDSDSKSLSLSTSQSGSTSTSTSTSASVRTSES 1086
S + S S + S + S + GST T+ S+ S
Sbjct: 219 GEESSQMAGYGSTQTGMKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGS 278

Query: 1087 QSTSGSMSASQSDSMSISTSFSDSTSDSKSASTASSESISQSASTSTSGSVSTSTSLSTS 1146
T+ S + S T+ +DS+ + ST ++ S + S + S T+
Sbjct: 279 TQTAQKGSDLTAGYGSTGTAGADSSLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTA 338

Query: 1147 NSERTSTSVSDSTSLSTSESDSISESTSTSDSISEAISASESTSISLSESNSTSDSESQS 1206
T T+ DS+ ++ S + S+ + + ++ S + ST + + S
Sbjct: 339 GYGSTGTAGDDSSLIAGYGSTQTAGEDSSLTAGYGSTQTAQKGSDLTAGYGSTGTAGADS 398

Query: 1207 ASAFLSESLSESTSESTSESVSSSTSESTSLSDSTSESGSTSTSLSNSTSGSASISTSTS 1266
+ S + EST + ST + SD T+ GST T+ +S+ + ST T+
Sbjct: 399 SLIAGYGSTQTAGEESTQTAGYGSTQTAQKGSDLTAGYGSTGTAGDDSSLIAGYGSTQTA 458

Query: 1267 ISESTSTFKSESVSTSLSMSTSTSLSNSTSLSTSLSDSTSDSKSDSLSTSMS--TSDSIS 1324
+S+ T S T+ S T+ STS + S + S + S T+ S
Sbjct: 459 GEDSSLTAGYGSTQTAQKGSDLTAGYGSTSTAGYESSLIAGYGSTQTAGYGSTLTAGYGS 518

Query: 1325 TSKSDSISTSTSLSGSTSESESDSTSSSESKSDSTSMSISMSQSTSGSTSTS------TS 1378
T + + S + GSTS + ++S+ + S T+ S+ + GST T+ T+
Sbjct: 519 TQTAQNESDLITGYGSTSTAGANSSLIAGYGSTQTASYNSVLTAGYGSTQTAREGSDLTA 578

Query: 1379 TSLSDSTSTSLSLSASMNQSGVDSNSASQSASNSTSTSTSESDSQSTSTYTSQSTSQSES 1438
S T+ S S + S ++ S + ST T+ S T+ Y S ST+ ++S
Sbjct: 579 GYGSTGTAGSDSSIIAGYGSTQTASYHSSLTAGYGSTQTAREQSVLTTGYGSTSTAGADS 638

Query: 1439 TSTSTSLSDSTSISKSTSQSGSTSTSASLSGSESESDSQSISTSASESTSESASTSLSDS 1498
+ + S T+ S +G ST + GS+ + S ST+ ++S+ + S +
Sbjct: 639 SLIAGYGSTQTAGYNSILTAGYGSTQTAQEGSDLTAGYGSTSTAGADSSLIAGYGSTQTA 698

Query: 1499 TSTSNSGSASTSTSLSNSASASESDSSSTSLSDSTSASMQSSESDSQSTSASLSDSLSTS 1558
S + ST + S S STS + + S+ + S ++ S + S
Sbjct: 699 GYNSILTAGYGSTQTAQEGSDLTSGYGSTSTAGADSSLIAGYGSTQTASYHSSLTAGYGS 758

Query: 1559 TSNRMSTIASLSTSVSTSESGSTSESTSESDSTSTSLSDSQSTSRSTSASGSASTSTSTS 1618
T + STS +G+ S + ST T+ S T+ S + S T+
Sbjct: 759 TQTAREQSVLTTGYGSTSTAGADSSLIAGYGSTQTAGYHSILTAGYGSTQTAQERSDLTT 818

Query: 1619 DSRSTSASTSTSMRTSTSDSQSMSLSTSTSTSMSDSTSLSDSVSDSTSDSTSASTSGSMS 1678
STS + + S + S + S T+ ST + SD T+ S ST+G S
Sbjct: 819 GYGSTSTAGADSSLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYDS 878

Query: 1679 VSISLSDSTSTSTSASEVMSASISDSQSMSESVNDSESVSESNSESDSKSMSGSTSVSDS 1738
I+ ST T+ S + + S + S + S S + +S ++G S +
Sbjct: 879 SLIAGYGSTQTAGYNSILTAGYGSTQTAQENSDLTTGYGSTSTAGYESSLIAGYGSTQTA 938

Query: 1739 GSLSVSTSLRKSESVSESSSLSGSQSMSDSVSTSDSSSLSVSTSLRSSESVSESDSLSDS 1798
S + S + S + S S++ DSS ++ S +++ S + S
Sbjct: 939 SFKSTLMAGYGSSQTAREQSSLTAGYGSTSMAGYDSSLIAGYGSTQTAGYQSTLTAGYGS 998

Query: 1799 KSTSGSTSTSTSGSLSTSTSLSGSESVSESTSLSDSISMSDSTSTSDSDSLSGSISLSGS 1858
T+ +ST T+G ST+T+ + S ++ S S S T+ S +SG S+ +
Sbjct: 999 TQTAEHSSTLTAGYGSTATAGADSSLIAGYGSSLTSGIRSFLTAGYGSTLISGLRSVLTA 1058

Query: 1859 TSLSTSDSLSDSKSLSSSQSMSGSESTSTSVSDSQSSSTSNSQFDSMSISASESDSMSTS 1918
S+ S S + S + S+ ++ +S+ + ++ SM I+ S +
Sbjct: 1059 GYGSSLISGRRSSLTAGYGSNQIASHRSSLIAGPESTQITGNR--SMLIAGKGSSQTAGY 1116

Query: 1919 DSSNISGSNSTSTSLSTSDSMSGSVSVSTSTSLSDSISGSTSVSDSSSTSTSTSLSDSMS 1978
S+ ISG++S + ++G+ S T+ S ++G+ S + S T+ +D +
Sbjct: 1117 RSTLISGADSVQMAGERGKLIAGADSTQTAGDRSKLLAGNNSYLTAGDRSKLTAGNDCIL 1176

Query: 1979 QSQSTSTSASG 1989
+ S +G
Sbjct: 1177 MAGDRSKLTAG 1187


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2682ENTEROTOXINA280.005 Heat-labile enterotoxin A chain signature.
		>ENTEROTOXINA#Heat-labile enterotoxin A chain signature.

Length = 258

Score = 28.4 bits (63), Expect = 0.005
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 30 IELFEHTFGLQKELVKYVGIAEATTAALYSASFINKNISRLASLSTIGILSVAA 83
I L++H G Q V+Y +T+ +L SA ++I L+ ST I +A
Sbjct: 57 INLYDHARGTQTGFVRYDDGYVSTSLSLRSAHLAGQSI--LSGYSTYYIYVIAT 108


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2683NUCEPIMERASE270.043 Nucleotide sugar epimerase signature.
		>NUCEPIMERASE#Nucleotide sugar epimerase signature.

Length = 334

Score = 27.4 bits (61), Expect = 0.043
Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 23 IPRPIAFVTTLNQDASVNAAPFSFFNIVNNHP 54
IP T + + AP+ +NI N+ P
Sbjct: 234 IPHADTQWTVETGTPAASIAPYRVYNIGNSSP 265


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2685SACTRNSFRASE451e-08 Streptothricin acetyltransferase signature.
		>SACTRNSFRASE#Streptothricin acetyltransferase signature.

Length = 173

Score = 45.3 bits (107), Expect = 1e-08
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 48 EKNDEVIGYIN--GPVIKERYISDDLFKNVSINNSEGGYISVLGLVVAPNYQGQGIAGRL 105
E +D + Y+ G Y+ ++ + I ++ GY + + VA +Y+ +G+ L
Sbjct: 51 EDDDMDVSYVEEEGKAAFLYYLENNCIGRIKIRSNWNGYALIEDIAVAKDYRKKGVGTAL 110

Query: 106 LNYFETLAKNHHRHGVTLTCRE---SLISFYEKYGYRNEGV 143
L+ AK +H G+ L ++ S FY K+ + V
Sbjct: 111 LHKAIEWAKENHFCGLMLETQDINISACHFYAKHHFIIGAV 151


ORFs having significant similarity with Known Virulence factors
LocusTagHitsScoreE-valueComments
SaurJH9_2689HTHTETR682e-16 TetR bacterial regulatory protein HTH signature.
		>HTHTETR#TetR bacterial regulatory protein HTH signature.

Length = 215

Score = 67.7 bits (165), Expect = 2e-16
Identities = 16/48 (33%), Positives = 31/48 (64%)

Query: 2 KDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSKKSIYE 49
+ I+D A+ LFS++G T+L +IAK+ + + ++Y+HF K ++
Sbjct: 13 RQHILDVALRLFSQQGVSSTSLGEIAKAAGVTRGAIYWHFKDKSDLFS 60



 
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