charite.christo.protein
Class CrudeSequenceDisSimilarity

java.lang.Object
  charite.christo.protein.CrudeSequenceDisSimilarity

All Implemented Interfaces:

SequenceDisSimilarity

public class CrudeSequenceDisSimilarity
extends java.lang.Object
implements SequenceDisSimilarity

Counting dissimilar residues in two aligned sequences.

Constructor Summary

CrudeSequenceDisSimilarity()

Method Summary

double

getValue(byte[] seq1, byte[] seq2, int from, int to)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CrudeSequenceDisSimilarity

public CrudeSequenceDisSimilarity()

Method Detail

getValue

public double getValue(byte[] seq1,
                       byte[] seq2,
                       int from,
                       int to)

Specified by:

getValue in interface SequenceDisSimilarity