'STRAP:multiple sequence alignments '

charite.christo.protein
Class ProteinUtils

java.lang.Object
  extended by charite.christo.protein.ProteinUtils
All Implemented Interfaces:
java.util.Comparator

public class ProteinUtils
extends java.lang.Object
implements java.util.Comparator


Field Summary
static int COMP_P_ALPHA
           
static int COMP_P_XYZ
           
static int COMP_SEL_VIS
           
 
Method Summary
static java.util.Comparator comparator(int type)
           
 int compare(java.lang.Object o0, java.lang.Object o1)
           
static java.lang.String mapRef(java.lang.String s)
           
 
Methods inherited from class java.lang.Object
equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 
Methods inherited from interface java.util.Comparator
equals
 

Field Detail

COMP_P_ALPHA

public static final int COMP_P_ALPHA
See Also:
Constant Field Values

COMP_P_XYZ

public static final int COMP_P_XYZ
See Also:
Constant Field Values

COMP_SEL_VIS

public static final int COMP_SEL_VIS
See Also:
Constant Field Values
Method Detail

comparator

public static java.util.Comparator comparator(int type)

compare

public int compare(java.lang.Object o0,
                   java.lang.Object o1)
Specified by:
compare in interface java.util.Comparator

mapRef

public static java.lang.String mapRef(java.lang.String s)

'STRAP:multiple sequence alignments '

'The most important classes are StrapAlign, Protein and StrapEvent.'