charite.christo.strap.extensions
Class CountResidues

java.lang.Object
  charite.christo.strap.extensions.CountResidues

All Implemented Interfaces:

HasModiCount, HasProtein, ValueOfProtein

public class CountResidues
extends java.lang.Object
implements ValueOfProtein, HasModiCount

HELP This class counts the amino acids in a protein.

Constructor Summary

CountResidues()

Method Summary

void	compute() When it is time consuming then do the calculation in the compute method.
Protein	getProtein()
double	getValue()
int	modificationCount()
boolean	setProtein(Protein p)

Methods inherited from class java.lang.Object

equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CountResidues

public CountResidues()

Method Detail

getProtein

public Protein getProtein()

Specified by:

getProtein in interface HasProtein

setProtein

public boolean setProtein(Protein p)

Specified by:

setProtein in interface ValueOfProtein

getValue

public double getValue()

Specified by:

getValue in interface ValueOfProtein

compute

public void compute()

Description copied from interface: ValueOfProtein

When it is time consuming then do the calculation in the compute method. Non time intensive calculations can be performed in getValue() directly.

Specified by:

compute in interface ValueOfProtein

modificationCount

public int modificationCount()

Specified by:

modificationCount in interface HasModiCount