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    December 11-13, 2023
    University of Oklahoma
    https://iccabs.engr.uconn.edu

    Advances in high-throughput technologies such as DNA sequencing and mass spectrometry are profoundly transforming life sciences, resulting in the collection of unprecedented amounts of biological and medical data. Using this data to advance our knowledge about fundamental biological processes and improve human health requires novel computational models and advanced analysis algorithms. ICCABS aims to bring together leading academic and industry researchers to discuss the latest advances in computational methods for bio and medical sciences.

    TOPICS

    Topics of interest include but are not limited to: Biological Big Data Analytics, Biological modeling and simulation, Biomedical image processing, Biomedical data and literature mining, Computational genetic epidemiology, Computational metabolomics, Computational proteomics, Databases and ontologies, Gene regulation, Genome analysis, analysis, Health Informatics, High-performance bio-computing, Immunoinformatics, Molecular evolution, Population genomics, Sequence analysis, Structural bioinformatics, biology and Transcriptomics.

    IMPORTANT DATES

    Papers submission deadline: October 7, 2023
    Notification of acceptance: November 1, 2023
    Final paper deadline: November 8, 2023
    Early registration deadline: November 8, 2023

    Submitter

    EXCERPT

    Nearly a decade ago, Emmanuelle Charpentier and Jennifer Doudna embarked on a journey that would transform the field of science. Their groundbreaking research on the CRISPR system revolutionized gene editing and ultimately earned them the 2020 Nobel Prize in Chemistry. Watch their captivating short film, offering insights into the process of scientific discovery, collaboration, and groundbreaking experimentation.
    https://www.youtube.com/watch?v=cuHD7jCY8X4
    Software: Python packages for bioinformatics
    Submitted by Gajendra P.S. Raghava; posted on Tuesday, September 05, 2023

    Submitter

    Raghava's group has announced Python packages in the field of bioinformatics. These packages can be installed by the simple command, "pip install package-name". They are free for the scientific community. I hope the public will be benefited by them.

    https://pypi.org/user/raghavagps/

    Submitter

    EXCERPT

    Adeno-associated virus (AAV) is reckoned as one of the most propitious vectors for gene research and therapy. This perception is due to an amalgamation of characteristics such as its variant types, minimal immunogenicity, extensive safety considerations, the extensive range of host cells it can infect (including both dividing and non-dividing cells), its potent dissemination capabilities, and its ability to facilitate prolonged gene expression.

    In the context of the Patsnap Bio Sequence Database, it's possible to extract sequences analogous to definite AAV sequences and examine new AAV data from sources accessible to the public, thereby providing a catalyst for advanced AAV research.
    Source: https://synapse.patsnap.com/blog/similar-sequence-search-for-adeno-associated-virus-aav

    Creative Biolabs, a leading biotech company specializing in customized solutions for antibody discovery and engineering, updated its highly anticipated scholarship program for 2023 in the field of life sciences.

    Creative Biolabs has established itself as a prominent player in the biotechnology industry, making significant contributions to various areas of life sciences, like antibodies, ADC development, and immunotherapies. The company has built a reputation as a trusted partner for academic researchers, pharmaceutical companies, and biotech startups, offering high-quality services and customized solutions.

    Creative Biolabs Scholarship Program:

    The Creative Biolabs scholarship program is set to support undergraduate and graduate students studying life sciences who demonstrate academic excellence and a strong passion for advancing the field. By inspiring students to contribute to cutting-edge research projects, the program seeks to foster scientific progress.

    Eligibility Criteria:

    The eligibility criteria are fair and reasonable, ensuring that deserving students receive the scholarship award. The minimum GPA requirement of 3.0 ensures that only students with above-average academic performance are considered. Additionally, extracurricular activities, leadership skills, and community involvement are taken into consideration, ensuring a comprehensive selection process.

    Scholarship Details:

    Selected applicants will be awarded a scholarship of $1,000, which can be utilized for tuition fees or educational expenses related to their studies in the sciences. Creative Biolabs will review all applications and select the most deserving candidate to receive the scholarship.

    Application Process:

    To apply for the Creative Biolabs Scholarship Program, students must complete an application form and submit it along with their academic transcripts, a reference letter from a teacher, school counselor, or community leader, and either a written essay of 800-1,000 words or a PowerPoint presentation of 10-12 pages with detailed lecture notes. The essay or PowerPoint submission should be original, grammatically correct, and emphasize the applicant's passion for their field of study, achievements, and future plans. The essay or PowerPoint requirement also allows the selection committee to evaluate the student's writing and presentation skills, which are essential qualities in their chosen field. All applications and supporting documents should be sent online to the designated email address.

    All applications must be submitted by September 30, 2023, and winners will be announced in October 2023.

    More details about the scholarship program can be found at https://www.creative-biolabs.com.

    About Us:

    Creative Biolabs is a cutting-edge biotech company that has emerged as a global leader in the field of antibody discovery and development. With a strong commitment to innovation and scientific excellence, Creative Biolabs has revolutionized the way antibodies are engineered and utilized in various research and therapeutic applications. At the core of Creative Biolabs' expertise lies their extensive premade antibody libraries, which serve as invaluable resources, providing researchers with an extensive repertoire of antibody candidates for targeted applications such as drug discovery, diagnostics, and immunotherapy.

    Source: https://www.creative-biolabs.com/scholarship-program.html

    Submitter

    November 24-26, 2023
    Vellore Institute of Technology, Vellore, India
    https://vit.ac.in/school-bio-sciences-technology-sbst/indian-conference-bioinformatics-2023-inbix23-0

    We take immense pride in announcing that this year's Inbix'23 would be held at VIT, Vellore campus, India, with Kenta Nakai, PhD., Professor, University of Tokyo, giving a keynote.

    We also take great honour in conferring Lifetime Achievement awards to PK Gupta, PhD., Professor Emeritus, CCSU, Meerut.; Jayaraman K Valadi, PhD., Distinguished Professor, FLAME University, Pune; and PB Kavi Kishor, Professor Emeritus, Osmania University, Hyderabad.

    We have 24 elite talks, bioinformatics for school children talks, posters, elevator pitches and social gatherings.

    CfP: https://easychair.org/cfp/Inbix2023

    IMPORTANT DATES

    Submissions open: August 15, 2023
    Early bird registration deadline: September 15, 2023
    Abstract registration deadline: October 15, 2023
    Submission deadline: October 29, 2023

    Best,
    Prash for Bioclues and #Inbix2023 Program Committee

    November 15-18, 2023
    Phoenix, AZ, USA
    https://abrcms.org

    For over 20 years, the Annual Biomedical Research Conference for Minoritized Scientists (ABRCMS) – recipient of the 2019 AIMBE Excellence in STEM Education Award – has been the go-to conference for historically excluded community college, undergraduate and postbaccalaureate students in science, technology, engineering and mathematics. This year, ABRCMS is offering several options for submitting an oral abstract, poster abstract, or ePoster abstract. Gather your latest research and get ready to present your science to esteemed and established researchers from universities across the country. We welcome submissions from all students, regardless of their educational backgrounds or paths. We are actively seeking abstracts from:
    • Community College Students
    • Undergraduate Students (Sophomore, Junior, or Senior)
    • Postbaccalaureate Students
    • Master's Level Graduate Students
    • Doctoral-Level Graduate Students
    Abstract submissions are due September 8, 2023, at 11:59 p.m. PT.

    Learn more about submitting an abstract: https://abrcms.org/index.php/present-at-abrcms/submit-an-abstract

    About ABRCMS: https://abrcms.org/index.php/about-abrcms/about-abrcms

    Questions? Contact abrcms[at]asmusa.org

    Hey Everyone,

    Wanted to show off a project I've been working on and ask for some feedback!

    I'm Jake, I'm a co-founder at Burla (https://burla.dev). Previously, I worked as a software engineer at a biotech startup (DayZeroDiagnostics) using WGS and machine learning to predict antibiotic resistance.

    When I started at DZD, our machine learning learning system was trained on the genomes of over 50k bacterial samples and took easily over a week to train. Getting it to train faster meant scaling across many machines in the cloud which wasn't a simple task, this is why I made Burla. Burla is a simple python package that lets you run a python function on every input in some list, at the same time, each on a separate computer in the cloud. Here's a link to a simple example: https://burla.dev/docs

    I was hoping you guys could help try it out and give feedback, we're happy to cover any compute cost so don't worry about using a lot of computers (the max is 1000 right now)!

    Some examples we've seen people build are:
    • Aligning of 1000 genomes to the same reference all at the same time on 1000 separate computers
    • Running an assembly algorithm on 1000 genomic samples all at the same time
    Shoot me a message if anything doesn't work, I'm always happy to hop on a call and help figure anything out, definitely let me know if you find a cool application!

    My email is jake[at]burla.dev, don't hesitate to reach out!

    Submitter

    EXCERPT

    An international research team has generated the first truly complete sequence of a human Y chromosome, the final human chromosome to be fully sequenced. The new sequence, which fills in gaps across more than 50% of the Y chromosome's length, uncovers important genomic features with implications for fertility, such as factors in sperm production.
    Source: https://www.genome.gov/news/news-release/researchers-assemble-the-first-complete-sequence-of-a-human-y-chromosome

    Article: https://www.nature.com/articles/s41586-023-06457-y (requires subscription)

    Submitter

    EXCERPT

    Question: Is there a dose-response association between screen time for children aged 1 year and functional development at ages 2 and 4 years?

    Findings: In this cohort study including 7097 mother-child pairs, a dose-response association was observed between greater screen time at age 1 year and developmental delays in communication and problem-solving at ages 2 and 4 years.

    Meaning: These findings suggest that domains of developmental delay should be considered separately in future discussions on screen time and child development.
    Source: https://jamanetwork.com/journals/jamapediatrics/fullarticle/2808593

    See also: https://www.nytimes.com/2023/08/21/health/screen-time-developmental-delays-babies.html
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    Acknowledgments

    We wish to thank the following for their support:

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