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Opportunity: Computational Biologist Postdoctoral Fellow (#81631) @ DOE Joint Genome Institute -- Walnut Creek, CA (US)
Submitted by Bill Cannan; posted on Tuesday, December 01, 2015
BACKGROUND
Berkeley Lab is Bringing Science Solutions to the World, and YOU can be a part of it!
In the world of science, Lawrence Berkeley National Laboratory (Berkeley Lab) is synonymous with "excellence." That's why we hire the best - whether in research, finance or other operations. This is a great opportunity to bring your top-notch skills to bear in support of world-class scientific research that addresses national and global challenges!
Position Summary:
Berkeley Lab's Joint Genome Institute (JGI) has an immediate opening for a Computational Biologist Postdoctoral Fellow. In this position you will work with the Plant Functional Genomics Group to perform research in plant genomics as part of an Advanced Research Projects Agency-Energy (ARPA-E) funded project to developed advanced breeding methods for sorghum.
RESPONSIBILITIES
What You Will Do:
- Store and organize results for presentation and viewing by project team members and the wider scientific community and prepare results for publication in scientific journals.
- Perform QTL and association studies to identify genomic regions associated with specific traits
- Create de-novo assemblies for many sorghum lines
- Improve methods for defining the core and pan-genome based on the de-novo assemblies
- Use the pan-genome to improve the accuracy of QTL and association studies
- Store and organize results for presentation and viewing by JGI staff, collaborators and the wider scientific community
- Interact with multi-institution project team to ensure efficient communication and completion of analysis projects
- Document group analysis procedures and methods for reference
- Write results up for publication
- Perform follow-up experiments to confirm computational predictions.
- Work with group members and/or outside collaborators on additional pan-genome projects.
REQUIREMENTS
What Is Required:
- Ph.D. in life sciences with relevant research experience
- Strong background in genetics, molecular biology and genomics
- Strong organizational and record keeping skills to record experiment results and analyze data
- Laboratory experience in molecular biology
- Effective oral and written communication skills to present findings at group meetings and conferences and publish results
- Ability to interact with a variety of technical and scientific personnel including Research Associates, Scientists and Software Engineers
PREFERENCES
Additional Desired Qualifications:
- Experience using bioinformatics tools such as Phytozome, ARB, BLAST, QIIME
- Experience with: use of computational methods, databases of genomic information, and methods of analysis for biological sequence data especially next-generation sequence data
TERMS
This is a 2-year term appointment with the possibility of renewal for up to 5 years based upon satisfactory job performance, continuing availability of funds, and ongoing operational needs.
COMPENSATION
Salary for postdoctoral positions depends on years of experience post-degree.
Berkeley Lab understands the postdoctoral experience in a research environment is unique. We are committed to the growth and development of early career researchers in pursuit of becoming next generation scientists and engineers. Read about the excellent postdoctoral benefits at Berkeley Lab (http://www.garnett-powers.com/postdoc/lbl/).
ABOUT US
Berkeley Lab addresses the world's most urgent scientific challenges by advancing sustainable energy, protecting human health, creating new materials, and revealing the origin and fate of the universe. Founded in 1931, Berkeley Lab's scientific expertise has been recognized with 13 Nobel prizes. The University of California manages Berkeley Lab for the U.S. Department of Energy's Office of Science.
DEADLINE
The posting shall remain open until the position is filled.
POLICY
Equal Employment Opportunity: Berkeley Lab is an Equal Opportunity/Affirmative Action Employer. All qualified applicants will receive consideration for employment without regard to race, color, religion, sex, sexual orientation, gender identity, national origin, disability, age, or protected veteran status. Click here (http://www.dol.gov/ofccp/regs/compliance/posters/pdf/eeopost.pdf) to view the poster: "Equal Employment Opportunity is the Law".
This position requires completion of a background check.
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