[Next-Generation Sequencing Book]
  • [Photo] Vijayaraj Nagarajan • October 7, 2016
    November 7-10, 2016
    National Institutes of Health
    9000 Rockville Pike
    Building 60, Room 162
    Bethesda, MD
    http://events.r20.constantcontact.com/register/event?oeidk=a07edaw4en19b72f6d2&llr=k4uamblab

    OBJECTIVES

    This training will introduce participants to the end-to-end solutions for analyzing metagenomic data, starting from data quality analysis, alignment, community profiling, taxonomic comparison and novel taxa discovery.

    Highlights:
    • Participants will work with a Graphic User Interface based Linux Desktop environment in the Amazon Cloud, that is specially configured to run popular open source metagenomics analysis tools.
    • Participants will be provided with free access to the fully configured Amazon Machine Image for their personal use after the training.
    • Participants will also receive a cookbook style manual for all the hands on exercises.
    • After training support is also provided through exclusive members only forum.
    • Hands-on training provided by NIH researchers active in the field of metagenomics
    Hands-on Skills/Tools Taught:
    • Processing and Analysis: mothur, FLASh
    • Analysis: Permanova
    • Analysis: ANOSIM
    • Marker analysis: LEfSe
    • Marker analysis: QIIME
    • Functional analysis: PICRUSt
    • Metagenomics analysis: A5miseq
    • Contig annotation: MEGAN
    • Functional analysis: bioBakery
    • Advanced visualizations: phyloseq
    • Network analysis: Cytoscape

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