Opportunity: Bioinformatics Analyst @ Mount Sinai School of Medicine -- New York, NY (US)

Opportunity: Bioinformatics Analyst @ Mount Sinai School of Medicine -- New York, NY (US)
Submitted by German Nudelman; posted on Wednesday, July 26, 2017

BACKGROUND

A Physical Activity Genomics, Epigenomics/transcriptomics Site (PAGES) of the NIH Molecular Transducers of Physical Activity Consortium (MoTrPAC) https://commonfund.nih.gov/moleculartransducers/overview at Icahn School of Medicine at Mount Sinai is seeking a highly motivated bioinformatics analyst to join a vibrant, interactive computational and experimental environment to provide bioinformatics support for the identification of molecular fingerprints of physical activity in humans and animal models. The successful candidate will possess a broad range of bioinformatics skills.

RESPONSIBILITIES

Contribute to the development of large scale NGS centered data analysis pipelines, including bulk cell RNA-seq, ATAC-seq, methyl-seq and single cell analyses
Create and support web applications and tools developed in the group, including the full cycle of development, deployment and maintenance
Contribute to scientific manuscripts

REQUIREMENTS

A diverse set of skills is mandatory for this position, including all of the following:

MS degree in computer science or related field with at least five years of directly related experience in bioinformatics and demonstrated solid knowledge in a broad spectrum of techniques in computer science
To qualify, the candidate must have high level programming skills under the Linux environment.
High proficiency and 3+ yrs of experience with Linux Bash programming
High proficiency in programming and data visualization using R
Experience with version control and high performance computing

PREFERENCES

High level of competence with Web 2.0 technologies. In-depth understanding and experience with the Semantic Web and building REST web services. A track record of ability to create innovative and intuitive JavaScript/CSS interfaces
Excellent knowledge of relational databases and MySQL in particular

LOCALE

New York, NY

COMPENSATION

Competitive salary
Full health, vision, and dental coverage
401K plan
Open paid time off

HOW TO APPLY

Email resume and cover letter to:
Dr. German Nudelman at german.nudelman[at]mssm.edu

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