Education: Training in Bioinformatic Analysis of Next Generation Sequencing Data at NIH

Education: Training in Bioinformatic Analysis of Next Generation Sequencing Data at NIH
Submitted by Vijayaraj Nagarajan; posted on Wednesday, January 10, 2018

February 6-9, 2018
National Institutes of Health
9000 Rockville Pike
Bethesda, MD, USA
https://faes.org/events/biotech-45-bioinformatic-analysis-next-generation-sequencing-data-4-day-hands-workshop-1

OBJECTIVES

This course will introduce students to bioinformatic analysis of next generation sequencing data, particularly for DNA-seq, RNA-seq, CHIP-seq, and epigenomics. The course will be comprised of lectures and hand-on sessions. Lectures will cover background knowledge and survey various software programs. For hand-on sessions, command line tools will be presented and the galaxy web based platform will be used to analyze primary data. Cloud computing, genomic databases, and de novo assembly will be surveyed.

HANDS-ON SKILLS/TOOLS TAUGHT

Overview on Bioinformatics Tools: Galaxy (Pre-processing, Format Conversion, etc.)
Databases and Tools, SNP Callers, Cloud
RNA-seq
CHIP-seq
Epigenomics
Cloud Computing
10k Genomes
Data Visualization
Comparative Genomics and Genome Alignment (biology + software)
Tutorial & Laboratory for de novo Assembly
RNA-seq, DNA-sequencing.

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