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    Education: Training in Bioinformatic Analysis of Next Generation Sequencing Data at NIH
    Submitted by Vijayaraj Nagarajan; posted on Wednesday, January 10, 2018

    February 6-9, 2018
    National Institutes of Health
    9000 Rockville Pike
    Bethesda, MD, USA[...]hop-1


    This course will introduce students to bioinformatic analysis of next generation sequencing data, particularly for DNA-seq, RNA-seq, CHIP-seq, and epigenomics. The course will be comprised of lectures and hand-on sessions. Lectures will cover background knowledge and survey various software programs. For hand-on sessions, command line tools will be presented and the galaxy web based platform will be used to analyze primary data. Cloud computing, genomic databases, and de novo assembly will be surveyed.

    • Overview on Bioinformatics Tools: Galaxy (Pre-processing, Format Conversion, etc.)
    • Databases and Tools, SNP Callers, Cloud
    • RNA-seq
    • CHIP-seq
    • Epigenomics
    • Cloud Computing
    • 10k Genomes
    • Data Visualization
    • Comparative Genomics and Genome Alignment (biology + software)
    • Tutorial & Laboratory for de novo Assembly
    • RNA-seq, DNA-sequencing.

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