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Education: Training in Advanced Transcriptomics (RNA Seq) Analysis @ NIH
Submitted by Vijayaraj Nagarajan; posted on Friday, April 20, 2018

May 15-18, 2018
National Institutes of Health
9000 Rockville Pike
Building 60, Room 162
Bethesda, MD 20892, USA
https://events.r20.constantcontact.com/register/eventReg?llr=k4uamblab&oeidk=a07ee7p59o00b805c1c

OBJECTIVES

Apart from performing the routine differential expression analysis using two different suite of tools, this hands-on training will help participants learn advanced RNA-Seq analysis techniques and tools for detecting snps, fusion genes, allele specific expressions, circular RNAs, viral/bacterial sequence identification, alternative polyadenylation and transcriptional regulatory network analysis.

Hands-on Skills/Tools Taught:

Differential expression analysis: Tuxedo tools
Differential expression analysis: Trinity tools
Fusion gene analysis : Tophat-Fusion SNP detection: GATK
Allele specific expression : WASP
Circular RNA identification : circexplorer
Alternative polyadenylation : DaPars
Viral integration : VirusFinder
Network analysis : Cytoscape

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