Not logged in
  • Log in
    Membership (42283+) Group hosting [?] Wiki
    Franklin Award

    About bioinformatics
    Bioinformatics training
    Bioinformatics jobs

    All information groups
    Online databases Online analysis tools Online education tools More tools

    All software groups
    FTP repository
    SVN & CVS repositories [?]
    Mailing lists

    News & Commentary
  • Submit
  • Archives
  • Subscribe

  • Jobs Forum
    (Career Center)
  • Submit
  • Archives
  • Subscribe
  • Career Center - Message forums

    Opportunity: Postdoc -- Natural Language Processing / Text Mining @ DTU Biosustain -- Lyngby, Greater Copenhagen, Denmark
    Submitted by Signatur AS; posted on Thursday, November 05, 2020

    Do you want to develop cutting edge technology to support cutting edge science?

    If you have or about to finish your PhD or have equivalent experience within Computer Science with an emphasis on Natural Language Processing, we have just the perfect job waiting for you. As part of the Novo Nordisk Foundation, Center for Biosustainability (DTU Biosustain), you will get the opportunity to work with the latest technologies and break new ground to the benefit of mankind.


    Computer Science and Natural Language Processing specialist

    We are looking for an ambitious Scientist that likes to create results via knowledge sharing and teamwork with due respect to professional and cultural differences. At the same time, you must be able to define the road map and be the primary driver of turning ideas into action.

    Additionally, your CV comprises:
    • A PhD (or nearly completed) or equivalent experience in Computer Science, Artificial Intelligence with an emphasis on Natural Language Processing
    • Excellent knowledge of Deep Learning methods applied to NLP
    • Good knowledge of graph-based Natural Language Processing
    • Excellent programming skills (Python) and knowledge of PyTorch, Tensorflow for implementation of new NLP algorithms
    • A track record of publications in high quality conferences (ACL, EMNLP, NAACL, Coling)
    • Preferably, familiarity with graph analysis algorithms and statistics (not a prerequisite for applying)
    • Motivation for working within biomedical text mining and the ability to work collaboratively with teams


    Based at the Technical University of Denmark (DTU) in Copenhagen, you will contribute to the further research and development of our new state-of-the-art informatics platform. By combining artificial intelligence, mechanistic modelling and knowledge graphs we are deriving deep insights from big data to address some of our world's greatest challenges. Your work directly supports approx. 300 world class scientists in Copenhagen and San Diego in their quest for development of new environment friendly products, better and less energy consuming manufacturing processes, new medical treatments, climate friendly farming, etc.

    Library and algorithm development, natural language generation, supervision...
    Your overall focus is to build new and better scientific knowledge. By unfolding your expertise within Natural Language Processing, you will help Scientists to consume, quickly understand and integrate huge amounts of knowledge that today is shared in multiple formats like PowerPoint, Google Slides, Electronic Lab Notebooks, books, etc.

    Your tasks will include to:
    • Develop new algorithms for neural information extraction, using (semi)-supervised and unsupervised techniques, transfer learning, distant supervision, applied in the area of biosciences
    • Able to evaluate the performance of neural models and validate the accuracy of extracted knowledge
    • Support knowledge enriching analysis results via natural language generation
    • Work closely with a software engineering team to translate best-performing techniques into production
    • Support and lead graduate, undergraduate students, and summer interns in NLP
    You will join a multi-disciplinary team with diverse specialties in computational biology, data engineering and software development. The team is geographically dispersed between the Technical University of Denmark (DTU) and the University of California San Diego (UCSD). Our culture is characterised by trust, knowledge sharing, joined decisions and helpfulness. Travelling is not part of the job but as we work closely together with colleagues in the US, you must be ready to do some calls outside normal office hours.

    Your work will be mentored by our Associate Scientific Director, Sophia Ananiadou. Sophia is also the Director of the National Text Mining Centre (NaCTeM) (, Department of Computer Science at The University of Manchester, UK. Although the position will be located at DTU Biosustain, the NLP research will be carried out in collaboration with NaCTeM. The successful candidates will benefit from the vibrant research environments of both DTU Biosustain and NaCTeM.


    The appointment will be based on the collective agreement with the Danish Confederation of Professional Associations. The allowance will be agreed upon with the relevant union.

    You can read more about career paths at DTU here ([...]paths).

    The period of employment can be up to 3 years with a fixed end date 31.12.2023.


    Please submit your online application no later than 26 November 2020 (Danish time).

    Apply at

    Applications must be submitted as one PDF file containing all materials to be given consideration. To apply, please open the link "Apply online", fill out the online application form, and attach all your materials in English in one PDF file. The file must include:
    • Application (cover letter)
    • CV
    • Diploma (MSc/PhD)
    • List of publications
    Further information:
    If you would like additional information about the position, please contact Evelyn Travnik, Chief Information Officer at etravnik[at] If necessary, we will also set up an additional phone call to ensure your understanding of the job and your opportunities.


    The Novo Nordisk Foundation Center for Biosustainability (DTU Biosustain):
    Recent progress in our ability to read and write genomic code, combined with advances in automation, analytics and data science, has fundamentally changed the scope and ambition of harnessing the potential of biological systems. Big data approaches and analysis of biological systems are key research instruments at the Center. DTU Biosustain utilizes these advances for microbial cell factory design to foster sustainable lifestyles in relation to three application areas: Sustainable Chemicals, Natural Products, and Microbial Foods. Learn more at

    Technology for people:
    DTU develops technology for people. With our international elite research and study programmes, we are helping to create a better world and to solve the global challenges formulated in the UN's 17 Sustainable Development Goals. Hans Christian Ørsted founded DTU in 1829 with a clear vision to develop and create value using science and engineering to benefit society. That vision lives on today. DTU has 12,000 students and 6,000 employees. We work in an international atmosphere and have an inclusive, evolving, and informal working environment. Our main campus is in Kgs. Lyngby north of Copenhagen and we have campuses in Roskilde and Ballerup and in Sisimiut in Greenland.


    All interested candidates irrespective of age, gender, disability, race, religion or ethnic background are encouraged to apply.

    Expanded view | Monitor forum | Save place

    Start a new thread:
    You have to be logged in to post a reply.


    Copyright © 2020 · Scilico, LLC