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Micro-Mar database published in BMC Bioinformatics
Submitted by Ravindra Pushker; posted on Monday, September 12, 2005
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Mentioned in an earlier post, the Micro-Mar database [1] has been created to collect DNA diversity information from marine prokaryotes for biogeographical and ecological analyses. The database currently includes 11874 sequences corresponding to high resolution taxonomic genes (16S rRNA, ITS and 23S rRNA) and many other genes including CDS of marine prokaryotes together with available biogeographical and ecological information.
The database aims to integrate molecular data and taxonomic affiliation with biogeographical and ecological features that will allow to have a dynamic representation of the marine microbial diversity embedded in a user friendly web interface. It is available online at
http://egg.umh.es/micromar/
Reference:
1. Ravindra Pushker, Giuseppe D'Auria, Jose C. Alba-Casado and Francisco Rodriguez-Valera. 2005. Micro-Mar: a database for dynamic representation of marine microbial biodiversity. BMC Bioinformatics 6:222.
http://www.biomedcentral.com/1471-2105/6/222/
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