Paxtools is a library for accessing and manipulating BioPAX (http://www.biopax.org). Software tools that use BioPAX, such as exporters, importers, analysis algorithms or editors can use Paxtools as their core BioPAX API. Paxtools supports BioPAX Level 2, and can automatically convert Level 1 models to Level 2. The latest release candidate for BioPAX Level 3 is fully supported, but it is still in beta as BioPAX Level 3 is not finalized.

This release only contains the core API. For persistency layer please check: http://www.inoh.org/inohblog/main/2007/10/paxtools_level2_persistency_la.html

The Paxtools core is developed at Computational Biology Center at MSKCC (http://cbio.mskcc.org), and the persistency layer is developed by INOH database (http://www.inoh.org).

FOR MORE INFORMATION

Here is the link to the site: http://sourceforge.net/project/showfiles.php?group_id=85345

Additional information on paxtools along with user's guide and API documentation can be found at: http://www.biopax.org/paxtools