[Next-Generation Sequencing Book]
  • [Photo] Stuart Brown • January 3, 2012

    RESPONSIBILITIES

    Will include setting up an analysis pipeline to process raw instrument output and conduct downstream bioinformatics analysis including: mapping to reference genomes, de novo assembly, cancer variant detection, expression analysis, ChIP-seq etc. Curation of sequence data, data quality control, and communication with diverse investigators are also important.

    REQUIREMENTS

    • MS or recent Ph.D. in Bioinformatics or related area. Applicants with strong computing skills and an interest in biological problems who have training in a quantitative discipline (engineering, physics, mathematics, biophysics) are also encouraged to apply.
    • Candidates must have expertise in Unix/Linux operating systems and shell scripting, and have experience with programming languages including Perl, Python, and Java.

    PREFERENCES

    Experience with 454 and Illumina DNA sequencers, software from these vendors, and NGS data analysis software (alignment, de novo assembly, variant detection, ChIP-seq, RNA-seq, etc).

    TERMS

    Full time permanent

    LOCALE

    New York University School of Medicine, NY City

    COMPENSATION

    TBD

    HOW TO APPLY

    Send resume to Stuart Brown: stuart.brown[at]nyumc.org.

    DEADLINE

    Job is available immediately. Applications will be accepted until the right candidate is found.

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