PROMPT (listed) - Summary

All categories :: bioinformatics software development :: PROMPT (listed)

PROMPT is a platform independent system for retrieval, analysis, mapping and comparison of protein sets. It allows easy mapping of different types of sequence identifiers, automatical data retrieval and integration, a multitude of analysis and comparison

License: GNU General Public License

Public areas This project has many places for you to explore and participate. The icons displayed below are also available at the top of the page for easy navigation.  Project homepage This home page points to the official page for this project, which may or may not be hosted at Bioinformatics.org.  Public forums There are 2 messages in 2 forums.  Project manager There are 0 open, public tasks, 0 total.  Support tickets There are 0 open tickets, 0 total.  Mailing lists There are 0 public mailing lists.  Public surveys There are 0 active surveys. SCM repository The SCM repository is a place for this project to store its source code. Members have access to change this master repository, while anonymous users may browse the most recent development version of this project. Instructions Download directory Projects may choose to have files other than their main releases available via this directory.

Members Project admins: Thorsten Schmidt Members: 1 [View all members] Downloads Module name: prompt No releases [View all files] Latest announcements Submit Archive Subscribe Protein mapping and comparison tool PROMPT - new release Submitted by Thorsten Schmidt; posted on Tuesday, October 17, 2006 PROMPT is a comprehensive bioinformatics software environment which enables the user to compare arbitrary protein sequence sets, revealing statistically significant differences in their annotation features. It allows automatic retrieval and integration of data from a multitude of molecular biological databases as well as from tab delimited format. Similarity-based mapping of sequence IDs makes it possible to link experimental information obtained from different sources despite discrepancies in gene identifiers and minor sequence variation. Analysis results can be visualized in the form of plots and spreadsheets and exported in various formats, including Microsoft Excel. PROMPT is open source and freely available from http://webclu.bio.wzw.tum.de/prompt/ New features in release 0.8.3: Retrieval and integration of the PEDANT databases Fast Mapping against large databases like UniProt or GenBank (potentially an order of magnitude faster than BLAST) Submit Archive Subscribe