[Next-Generation Sequencing Book]

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  • [Photo] Kazuharu Arakawa • July 27, 2003
    G-language GAE v.2 Preview Release 3 for MacOS X

    This is a preview release package for MacOS X, 10.2.
    Currently only the library and command line version is
    available on MacOS X.

    MacOS X version 10.2 with developers's kit and
    gnuplot(use fink!) is required for installation. This package
    may work with 10.0 or 10.1 with perl 5.6.0, but it will not
    work with 10.3(Panther) that has perl 5.8.0.

    GUI of G-language GAE v.2 is currently not available for
    MacOS X.

    Uncompress the tar ball, and follow instructions in INSTALL
    text. Basically you just need to run "sh INSTALL.sh" as root
  • [Photo] Kazuharu Arakawa • June 5, 2003
    G-language GAE v.2 PR3 is out. This package is ready for RedHat 8 and 9, and most possibly on Yellow Dog Linux on PPC. G-language GAE v.2 is 100% upward compatible with v.1, so users using RedHat Linux 8 and 9 are recommended to use this package instead of v.1.

    Many functionalities are added. Check the official web site at http://www.g-language.org
  • [Photo] Kazuharu Arakawa • July 30, 2002
    Version 1.1.0 is in CVS now, which is the first milestone release of G-language GAE version 2 branch. For details, look in the archive of g-language-users[at]bioinformatics.org.
  • [Photo] Kazuharu Arakawa • May 28, 2002
    G-language Genome Analysis Environment Version 1.0.2b is released for Windows and RedHat Linux.

    Significant changes have been made in the installer and the image viewer, reducing installation problems in Windows and providing greater flexibility in Linux systems.

    Windows version now uses Win32 API OLE instead of gimv, so that InternetExplorer version greater than 5.5 is required.

    Linux version now uses Image Magick instead of gimv.


    Changes from 1.0.1 to 1.0.2:
    • addition
    1. incorporated CASYS (cDNA Analysis System)
    and related modules.

    2. incorporated OASyS (ORF Analysis System)
    and related modules.

    3. gimv switched to "display" (Image Magick) in Linux,
    to InternetExplorer from Win32API-OLE in Windows

    4. pdf files and gcf files are available

    5. Inspire API
    • specification changes
    1. G.pm (minor change in $gb->cds())

    2. SubOpt.pm (minor upgrade)

    3. Rcmd.pm (minor upgrade)

    4. G::Messenger.pm (minor upgrade)
    • bug fix
    1. G::Seq::GCskew.pm
    2. G::Seq::Codon.pm
    3. G::Seq::PatSearch.pm
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