G-language Genome Analysis Environment - Summary

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G-language GAE is a software package aiming to provide a generic development and analysis environment for the analysis of complete genomes. (Development at Bioinformatics.org is discontinued. Please proceed to the home page at http://www.g-language.org/.)

License: GNU General Public License

Public areas This project has many places for you to explore and participate. The icons displayed below are also available at the top of the page for easy navigation.  Project homepage This home page points to the official page for this project, which may or may not be hosted at Bioinformatics.org.  Public forums There are 3 messages in 2 forums.  Project manager There are 0 open, public tasks, 0 total.  Support tickets There are 0 open tickets, 0 total.  Mailing lists There are 0 public mailing lists.  Public surveys There are 0 active surveys. SCM repository The SCM repository is a place for this project to store its source code. Members have access to change this master repository, while anonymous users may browse the most recent development version of this project. Instructions Download directory Projects may choose to have files other than their main releases available via this directory.

Members Project admins: Kazuharu Arakawa Members: 8 [View all members] Downloads Module name: - No files in the latest version: 1.0.2b. Module name: Windows version discontinued Latest release is 1.49 View: [Release Notes & Changelog] Download: [exe] Module name: See news for MacOS X version No files in the latest version: 2 PR4 (1.51). Module name: G-language GAE v.2 (UNIX) Latest release is 1.7.1 View: [Release Notes & Changelog] Download: [tar/gz] [View all files] Latest announcements Submit Archive Subscribe G-language GAE 1.6.2 for MacOS X (Tiger) Submitted by Kazuharu Arakawa; posted on Saturday, May 13, 2006 G-language GAE 1.6.2 for MacOS X (Tiger) both for Intel and PowerPC versions are now available. Since bioinformatics.org web-server is too slow, we are distributing the package from our web-site. http://www.g-language.org/data/G-languageGAE-1.6.2-Tiger.dmg Enjoy! Version 2 PR 3 Installer Package is finally available for MacOS X! Submitted by Kazuharu Arakawa; posted on Sunday, July 27, 2003 G-language GAE v.2 Preview Release 3 for MacOS X This is a preview release package for MacOS X, 10.2. Currently only the library and command line version is available on MacOS X. MacOS X version 10.2 with developers's kit and gnuplot(use fink!) is required for installation. This package may work with 10.0 or 10.1 with perl 5.6.0, but it will not work with 10.3(Panther) that has perl 5.8.0. GUI of G-language GAE v.2 is currently not available for MacOS X. Uncompress the tar ball, and follow instructions in INSTALL text. Basically you just need to run "sh INSTALL.sh" as root Version 2 Preview Release 3 is out! Submitted by Kazuharu Arakawa; posted on Thursday, June 5, 2003 G-language GAE v.2 PR3 is out. This package is ready for RedHat 8 and 9, and most possibly on Yellow Dog Linux on PPC. G-language GAE v.2 is 100% upward compatible with v.1, so users using RedHat Linux 8 and 9 are recommended to use this package instead of v.1. Many functionalities are added. Check the official web site at http://www.g-language.org Version 1.1.0 Submitted by Kazuharu Arakawa; posted on Tuesday, July 30, 2002 Version 1.1.0 is in CVS now, which is the first milestone release of G-language GAE version 2 branch. For details, look in the archive of g-language-users[at]bioinformatics.org. Version 1.0.2b Released! Submitted by Kazuharu Arakawa; posted on Tuesday, May 28, 2002 G-language Genome Analysis Environment Version 1.0.2b is released for Windows and RedHat Linux. Significant changes have been made in the installer and the image viewer, reducing installation problems in Windows and providing greater flexibility in Linux systems. Windows version now uses Win32 API OLE instead of gimv, so that InternetExplorer version greater than 5.5 is required. Linux version now uses Image Magick instead of gimv. Changes from 1.0.1 to 1.0.2: addition 1. incorporated CASYS (cDNA Analysis System) and related modules. 2. incorporated OASyS (ORF Analysis System) and related modules. 3. gimv switched to "display" (Image Magick) in Linux, to InternetExplorer from Win32API-OLE in Windows 4. pdf files and gcf files are available 5. Inspire API specification changes 1. G.pm (minor change in $gb->cds()) 2. SubOpt.pm (minor upgrade) 3. Rcmd.pm (minor upgrade) 4. G::Messenger.pm (minor upgrade) bug fix 1. G::Seq::GCskew.pm 2. G::Seq::Codon.pm 3. G::Seq::PatSearch.pm Submit Archive Subscribe