Basic Information | |||
Gene ID | 100754443 | ||
Gene Name | I79_018551 | ||
Full Name | Transcription factor SOX-10 | ||
Organism | Cricetulus griseus [10029] |
Cross Reference | |||
UniProt | G3I510 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | cge:100754443 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003510327 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 102 | 179 | 2.00e-33 | High mobility group box domain |
XP_003510327 | Pfam | PF00505 | IPR009071 | 104 | 172 | 2.40e-24 | High mobility group box domain |
XP_003510327 | Pfam | PF12444 | IPR022151 | 12 | 94 | 1.20e-24 | Sox developmental protein N-terminal |
XP_003510327 | ProSiteProfiles | PS50118 | IPR009071 | 104 | 172 | 0.00e-00 | High mobility group box domain |
XP_003510327 | SMART | SM00398 | IPR009071 | 103 | 173 | 1.40e-29 | High mobility group box domain |
XP_003510327 | SUPERFAMILY | SSF47095 | IPR009071 | 86 | 176 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003510327 | PF12444 | 2.8e-25 | Sox_N | Sox developmental protein N terminal |
XP_003510327 | PF00505 | 1.4e-24 | HMG_box | HMG (high mobility group) box |
XP_003510327 | PF09011 | 9.1e-11 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003510327 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003510327 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003510327 | GO:0007275 | biological_process | multicellular organismal development |
XP_003510327 | GO:0014029 | biological_process | neural crest formation |
XP_003510327 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
XP_003510327 | GO:0005634 | cellular_component | nucleus |
XP_003510327 | GO:0005737 | cellular_component | cytoplasm |
XP_003510327 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10224 | Saccoglossus kowalevskii | 100367276 | 9483 | Callithrix jacchus | 100404951 |
8128 | Oreochromis niloticus | 100534551 | 7029 | Acyrthosiphon pisum | 100572600 |
9823 | Sus scrofa | 100737411 | 8090 | Oryzias latipes | 100304452 |
10141 | Cavia porcellus | 100725927 | 9597 | Pan paniscus | 100970122 |
43179 | Ictidomys tridecemlineatus | 101969095 | 7955 | Danio rerio | 140616 |
10116 | Rattus norvegicus | 29361 | 9615 | Canis familiaris | 481258 |
28377 | Anolis carolinensis | ENSACAG00000008719 | 9365 | Erinaceus europaeus | ENSEEUG00000011263 |
9685 | Felis catus | ENSFCAG00000002807 | 9315 | Macropus eugenii | ENSMEUG00000008079 |
9103 | Meleagris gallopavo | ENSMGAG00000012508 | 9986 | Oryctolagus cuniculus | ENSOCUG00000011639 |
9978 | Ochotona princeps | ENSOPRG00000013575 | 9601 | Pongo abelii | ENSPPYG00000011810 |
9305 | Sarcophilus harrisii | ENSSHAG00000008406 | 99883 | Tetraodon nigroviridis | ENSTNIG00000010828 |
30611 | Otolemur garnettii | 100951618 | 9555 | Papio anubis | 100998198 |
39432 | Saimiri boliviensis | 101051303 | 9595 | Gorilla gorilla | 101135517 |
9669 | Mustela putorius furo | 101685253 | 7897 | Latimeria chalumnae | 102354873 |
13735 | Pelodiscus sinensis | 102463380 | 7227 | Drosophila melanogaster | 45039 |
7668 | Strongylocentrotus purpuratus | 581729 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000010350 |
7719 | Ciona intestinalis | ENSCING00000001019 | 51511 | Ciona savignyi | ENSCSAVG00000008424 |
10020 | Dipodomys ordii | ENSDORG00000003967 | 9796 | Equus caballus | ENSECAG00000024147 |
9371 | Echinops telfairi | ENSETEG00000012633 | 69293 | Gasterosteus aculeatus | ENSGACG00000011185 |
9031 | Gallus gallus | ENSGALG00000012290 | 8049 | Gadus morhua | ENSGMOG00000005629 |
9785 | Loxodonta africana | ENSLAFG00000001445 | 30608 | Microcebus murinus | ENSMICG00000013132 |
59463 | Myotis lucifugus | ENSMLUG00000014317 | 9544 | Macaca mulatta | ENSMMUG00000002412 |
13616 | Monodelphis domestica | ENSMODG00000019062 | 61853 | Nomascus leucogenys | ENSNLEG00000002643 |
9813 | Procavia capensis | ENSPCAG00000005913 | 9598 | Pan troglodytes | ENSPTRG00000014357 |
132908 | Pteropus vampyrus | ENSPVAG00000010109 | 37347 | Tupaia belangeri | ENSTBEG00000000175 |
31033 | Takifugu rubripes | ENSTRUG00000008350 | 9739 | Tursiops truncatus | ENSTTRG00000004818 |
30538 | Vicugna pacos | ENSVPAG00000000908 | 8364 | Xenopus tropicalis | ENSXETG00000022348 |
8083 | Xiphophorus maculatus | ENSXMAG00000001603 |