Basic Information | |||
Gene ID | 102354873 | ||
Gene Name | NULL | ||
Full Name | Uncharacterized protein | ||
Organism | Latimeria chalumnae [7897] |
Cross Reference | |||
UniProt | H3A5R9 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSLACP00000004990 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 95 | 172 | 4.10e-33 | High mobility group box domain |
ENSLACP00000004990 | Pfam | PF00505 | IPR009071 | 97 | 165 | 5.60e-24 | High mobility group box domain |
ENSLACP00000004990 | Pfam | PF12444 | IPR022151 | 11 | 87 | 1.20e-26 | Sox developmental protein N-terminal |
ENSLACP00000004990 | ProSiteProfiles | PS50118 | IPR009071 | 97 | 165 | 0.00e-00 | High mobility group box domain |
ENSLACP00000004990 | SMART | SM00398 | IPR009071 | 96 | 166 | 2.40e-29 | High mobility group box domain |
ENSLACP00000004990 | SUPERFAMILY | SSF47095 | IPR009071 | 79 | 169 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSLACP00000004990 | PF12444 | 1.2e-26 | Sox_N | Sox developmental protein N terminal |
ENSLACP00000004990 | PF00505 | 2.9e-24 | HMG_box | HMG (high mobility group) box |
ENSLACP00000004990 | PF09011 | 1.4e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSLACP00000004990 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSLACP00000004990 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSLACP00000004990 | GO:0007275 | biological_process | multicellular organismal development |
ENSLACP00000004990 | GO:0014029 | biological_process | neural crest formation |
ENSLACP00000004990 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSLACP00000004990 | GO:0005634 | cellular_component | nucleus |
ENSLACP00000004990 | GO:0005737 | cellular_component | cytoplasm |
ENSLACP00000004990 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8090 | Oryzias latipes | 100304452 | 9483 | Callithrix jacchus | 100404951 |
10141 | Cavia porcellus | 100725927 | 9823 | Sus scrofa | 100737411 |
10029 | Cricetulus griseus | 100754443 | 30611 | Otolemur garnettii | 100951618 |
9597 | Pan paniscus | 100970122 | 9555 | Papio anubis | 100998198 |
39432 | Saimiri boliviensis | 101051303 | 9669 | Mustela putorius furo | 101685253 |
43179 | Ictidomys tridecemlineatus | 101969095 | 8083 | Xiphophorus maculatus | 102221365 |
13735 | Pelodiscus sinensis | 102463380 | 7955 | Danio rerio | 140616 |
10116 | Rattus norvegicus | 29361 | 7227 | Drosophila melanogaster | 45039 |
9615 | Canis familiaris | 481258 | 10020 | Dipodomys ordii | ENSDORG00000003967 |
9796 | Equus caballus | ENSECAG00000024147 | 9365 | Erinaceus europaeus | ENSEEUG00000011263 |
9371 | Echinops telfairi | ENSETEG00000012633 | 9685 | Felis catus | ENSFCAG00000002807 |
69293 | Gasterosteus aculeatus | ENSGACG00000016017 | 9031 | Gallus gallus | ENSGALG00000012290 |
9315 | Macropus eugenii | ENSMEUG00000008079 | 9103 | Meleagris gallopavo | ENSMGAG00000012508 |
30608 | Microcebus murinus | ENSMICG00000013132 | 59463 | Myotis lucifugus | ENSMLUG00000014317 |
13616 | Monodelphis domestica | ENSMODG00000019062 | 8128 | Oreochromis niloticus | ENSONIG00000018032 |
9978 | Ochotona princeps | ENSOPRG00000013575 | 9601 | Pongo abelii | ENSPPYG00000011810 |
132908 | Pteropus vampyrus | ENSPVAG00000010109 | 99883 | Tetraodon nigroviridis | ENSTNIG00000010828 |
31033 | Takifugu rubripes | ENSTRUG00000008350 | 9739 | Tursiops truncatus | ENSTTRG00000004818 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000010350 | 8049 | Gadus morhua | ENSGMOG00000005629 |