Basic Information | |||
Gene ID | 100970122 | ||
Gene Name | SOX10 | ||
Full Name | PREDICTED: transcription factor SOX-10 [Pan paniscus]. | ||
Organism | Pan paniscus [9597] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003821692 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 278 | 355 | 4.30e-33 | High mobility group box domain |
XP_003821692 | Pfam | PF00505 | IPR009071 | 280 | 348 | 5.40e-24 | High mobility group box domain |
XP_003821692 | Pfam | PF12444 | IPR022151 | 188 | 270 | 1.00e-24 | Sox developmental protein N-terminal |
XP_003821692 | ProSiteProfiles | PS50118 | IPR009071 | 280 | 348 | 0.00e-00 | High mobility group box domain |
XP_003821692 | SMART | SM00398 | IPR009071 | 279 | 349 | 2.70e-29 | High mobility group box domain |
XP_003821692 | SUPERFAMILY | SSF47095 | IPR009071 | 262 | 352 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003821692 | PF12444 | 2.5e-25 | Sox_N | Sox developmental protein N terminal |
XP_003821692 | PF00505 | 2.9e-24 | HMG_box | HMG (high mobility group) box |
XP_003821692 | PF09011 | 4.3e-10 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003821692 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_003821692 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_003821692 | GO:0007275 | biological_process | multicellular organismal development |
XP_003821692 | GO:0014029 | biological_process | neural crest formation |
XP_003821692 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
XP_003821692 | GO:0005634 | cellular_component | nucleus |
XP_003821692 | GO:0005737 | cellular_component | cytoplasm |
XP_003821692 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100121326 | 6087 | Hydra magnipapillata | 100201982 |
10224 | Saccoglossus kowalevskii | 100367276 | 9483 | Callithrix jacchus | 100404951 |
8128 | Oreochromis niloticus | 100534551 | 7029 | Acyrthosiphon pisum | 100572600 |
30195 | Bombus terrestris | 100649351 | 132113 | Bombus impatiens | 100746111 |
10029 | Cricetulus griseus | 100754443 | 7463 | Apis florea | 100865918 |
143995 | Megachile rotundata | 100874890 | 34638 | Metaseiulus occidentalis | 100903070 |
30611 | Otolemur garnettii | 100951618 | 8090 | Oryzias latipes | 100304452 |
10141 | Cavia porcellus | 100725927 | 43179 | Ictidomys tridecemlineatus | 101969095 |
9615 | Canis familiaris | 481258 | 28377 | Anolis carolinensis | ENSACAG00000008719 |
9103 | Meleagris gallopavo | ENSMGAG00000012508 | 9986 | Oryctolagus cuniculus | ENSOCUG00000011639 |
9978 | Ochotona princeps | ENSOPRG00000013575 | 9305 | Sarcophilus harrisii | ENSSHAG00000008406 |
9555 | Papio anubis | 100998198 | 39432 | Saimiri boliviensis | 101051303 |
9595 | Gorilla gorilla | 101135517 | 9669 | Mustela putorius furo | 101685253 |
7897 | Latimeria chalumnae | 102354873 | 13735 | Pelodiscus sinensis | 102463380 |
7955 | Danio rerio | 140616 | 10116 | Rattus norvegicus | 29361 |
7227 | Drosophila melanogaster | 45039 | 7668 | Strongylocentrotus purpuratus | 581729 |
7460 | Apis mellifera | 727284 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000010350 |
7719 | Ciona intestinalis | ENSCING00000001019 | 51511 | Ciona savignyi | ENSCSAVG00000008424 |
10020 | Dipodomys ordii | ENSDORG00000003967 | 9796 | Equus caballus | ENSECAG00000024147 |
9365 | Erinaceus europaeus | ENSEEUG00000011263 | 9371 | Echinops telfairi | ENSETEG00000012633 |
9685 | Felis catus | ENSFCAG00000002807 | 69293 | Gasterosteus aculeatus | ENSGACG00000011185 |
9031 | Gallus gallus | ENSGALG00000012290 | 8049 | Gadus morhua | ENSGMOG00000005629 |
9785 | Loxodonta africana | ENSLAFG00000001445 | 9315 | Macropus eugenii | ENSMEUG00000008079 |
30608 | Microcebus murinus | ENSMICG00000013132 | 59463 | Myotis lucifugus | ENSMLUG00000014317 |
9544 | Macaca mulatta | ENSMMUG00000002412 | 13616 | Monodelphis domestica | ENSMODG00000019062 |
9813 | Procavia capensis | ENSPCAG00000005913 | 7757 | Petromyzon marinus | ENSPMAG00000006957 |
9601 | Pongo abelii | ENSPPYG00000011810 | 9598 | Pan troglodytes | ENSPTRG00000014357 |
132908 | Pteropus vampyrus | ENSPVAG00000010109 | 9823 | Sus scrofa | ENSSSCG00000000115 |
59729 | Taeniopygia guttata | ENSTGUG00000006856 | 99883 | Tetraodon nigroviridis | ENSTNIG00000010828 |
31033 | Takifugu rubripes | ENSTRUG00000008350 | 9739 | Tursiops truncatus | ENSTTRG00000004818 |
8364 | Xenopus tropicalis | ENSXETG00000022348 | 8083 | Xiphophorus maculatus | ENSXMAG00000001603 |
Paralogs | |||
100969004 |