
Basic Information | |||
| Gene ID | 101040304 | ||
| Gene Name | RXRB | ||
| Full Name | PREDICTED: retinoic acid receptor RXR-beta [Saimiri boliviensisboliviensis]. | ||
| Organism | Saimiri boliviensis [39432] | ||
Cross Reference | |||
| UniProt | NULL | UniGene | NULL |
| PDB | NULL | OMIM | NULL |
| KEGG | NULL | UCSC | NULL |
Protein Interactions | |
| DIP | NULL |
| IntAct | NULL |
| MINT | NULL |
| STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
| Protein | Program | Term | IPRS | Start | End | Score | Description |
| XP_003923366 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 268 | 502 | 2.70e-103 | Nuclear hormone receptor, ligand-binding |
| XP_003923366 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 174 | 254 | 2.40e-32 | Zinc finger, NHR/GATA-type |
| XP_003923366 | Pfam | PF00104 | IPR000536 | 308 | 485 | 2.00e-39 | Nuclear hormone receptor, ligand-binding, core |
| XP_003923366 | Pfam | PF00105 | IPR001628 | 176 | 244 | 1.40e-31 | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | PRINTS | PR00047 | IPR001628 | 177 | 193 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | PRINTS | PR00047 | IPR001628 | 193 | 208 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | PRINTS | PR00047 | IPR001628 | 226 | 234 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | PRINTS | PR00047 | IPR001628 | 234 | 242 | 1.40e-18 | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | PRINTS | PR00398 | IPR001723 | 238 | 248 | 1.30e-34 | Steroid hormone receptor |
| XP_003923366 | PRINTS | PR00398 | IPR001723 | 314 | 335 | 1.30e-34 | Steroid hormone receptor |
| XP_003923366 | PRINTS | PR00398 | IPR001723 | 335 | 351 | 1.30e-34 | Steroid hormone receptor |
| XP_003923366 | PRINTS | PR00398 | IPR001723 | 403 | 418 | 1.30e-34 | Steroid hormone receptor |
| XP_003923366 | PRINTS | PR00398 | IPR001723 | 460 | 477 | 1.30e-34 | Steroid hormone receptor |
| XP_003923366 | PRINTS | PR00545 | IPR000003 | 245 | 258 | 1.80e-41 | Retinoid X receptor/HNF4 |
| XP_003923366 | PRINTS | PR00545 | IPR000003 | 365 | 390 | 1.80e-41 | Retinoid X receptor/HNF4 |
| XP_003923366 | PRINTS | PR00545 | IPR000003 | 391 | 409 | 1.80e-41 | Retinoid X receptor/HNF4 |
| XP_003923366 | PRINTS | PR00545 | IPR000003 | 432 | 451 | 1.80e-41 | Retinoid X receptor/HNF4 |
| XP_003923366 | ProSitePatterns | PS00031 | IPR001628 | 177 | 203 | - | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | ProSiteProfiles | PS51030 | IPR001628 | 174 | 249 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | SMART | SM00399 | IPR001628 | 174 | 245 | 1.30e-41 | Zinc finger, nuclear hormone receptor-type |
| XP_003923366 | SMART | SM00430 | IPR000536 | 313 | 472 | 8.40e-54 | Nuclear hormone receptor, ligand-binding, core |
| XP_003923366 | SUPERFAMILY | SSF48508 | IPR008946 | 227 | 499 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
| Protein | Pfam ID | E.value | Name | Description |
| XP_003923366 | PF00104 | 1.4e-39 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
| XP_003923366 | PF00105 | 7.9e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
| XP_003923366 | PF11825 | 2.4e-06 | Nuc_recep-AF1 | Nuclear/hormone receptor activator site AF-1 |
Orthologs | |||||
| TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
| 9823 | Sus scrofa | 100156801 | 9986 | Oryctolagus cuniculus | 100354287 |
| 9597 | Pan paniscus | 100992933 | 9555 | Papio anubis | 101021005 |
| 9669 | Mustela putorius furo | 101679943 | 59463 | Myotis lucifugus | 102442015 |
| 9615 | Canis familiaris | 481735 | 8364 | Xenopus tropicalis | 548691 |
| 9606 | Homo sapiens | 6257 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000001719 |
| 9913 | Bos taurus | ENSBTAG00000000602 | 9358 | Choloepus hoffmanni | ENSCHOG00000009975 |
| 9483 | Callithrix jacchus | ENSCJAG00000021619 | 9361 | Dasypus novemcinctus | ENSDNOG00000015431 |
| 10020 | Dipodomys ordii | ENSDORG00000013816 | 9365 | Erinaceus europaeus | ENSEEUG00000012064 |
| 9685 | Felis catus | ENSFCAG00000006981 | 9595 | Gorilla gorilla | ENSGGOG00000009823 |
| 9785 | Loxodonta africana | ENSLAFG00000002141 | 9315 | Macropus eugenii | ENSMEUG00000008618 |
| 30608 | Microcebus murinus | ENSMICG00000000899 | 13616 | Monodelphis domestica | ENSMODG00000014249 |
| 61853 | Nomascus leucogenys | ENSNLEG00000006809 | 30611 | Otolemur garnettii | ENSOGAG00000011689 |
| 9978 | Ochotona princeps | ENSOPRG00000000905 | 9813 | Procavia capensis | ENSPCAG00000010517 |
| 9601 | Pongo abelii | ENSPPYG00000017239 | 9598 | Pan troglodytes | ENSPTRG00000018034 |
| 132908 | Pteropus vampyrus | ENSPVAG00000001888 | 10116 | Rattus norvegicus | ENSRNOG00000000464 |
| 9305 | Sarcophilus harrisii | ENSSHAG00000006089 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000027099 |
| 37347 | Tupaia belangeri | ENSTBEG00000015312 | 9739 | Tursiops truncatus | ENSTTRG00000004291 |
Paralogs | |||
| 101040247 | 101044148 | ||