Basic Information | |||
Gene ID | 100156801 | ||
Gene Name | RXRB; SBAB-279G2.3-001 | ||
Full Name | Retinoid X receptor, beta | ||
Organism | Sus scrofa [9823] |
Cross Reference | |||
UniProt | A5D9P3 | UniGene | Ssc.1598 |
PDB | NULL | OMIM | NULL |
KEGG | ssc:100156801 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSSSCP00000031110 | Gene3D | G3DSA:1.10.565.10 | IPR008946 | 295 | 529 | 3.10e-103 | Nuclear hormone receptor, ligand-binding |
ENSSSCP00000031110 | Gene3D | G3DSA:3.30.50.10 | IPR013088 | 201 | 281 | 2.60e-32 | Zinc finger, NHR/GATA-type |
ENSSSCP00000031110 | Pfam | PF00104 | IPR000536 | 335 | 512 | 2.20e-39 | Nuclear hormone receptor, ligand-binding, core |
ENSSSCP00000031110 | Pfam | PF00105 | IPR001628 | 203 | 271 | 1.50e-31 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | PRINTS | PR00047 | IPR001628 | 204 | 220 | 1.70e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | PRINTS | PR00047 | IPR001628 | 220 | 235 | 1.70e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | PRINTS | PR00047 | IPR001628 | 253 | 261 | 1.70e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | PRINTS | PR00047 | IPR001628 | 261 | 269 | 1.70e-18 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | PRINTS | PR00398 | IPR001723 | 265 | 275 | 1.70e-34 | Steroid hormone receptor |
ENSSSCP00000031110 | PRINTS | PR00398 | IPR001723 | 341 | 362 | 1.70e-34 | Steroid hormone receptor |
ENSSSCP00000031110 | PRINTS | PR00398 | IPR001723 | 362 | 378 | 1.70e-34 | Steroid hormone receptor |
ENSSSCP00000031110 | PRINTS | PR00398 | IPR001723 | 430 | 445 | 1.70e-34 | Steroid hormone receptor |
ENSSSCP00000031110 | PRINTS | PR00398 | IPR001723 | 487 | 504 | 1.70e-34 | Steroid hormone receptor |
ENSSSCP00000031110 | PRINTS | PR00545 | IPR000003 | 272 | 285 | 2.10e-41 | Retinoid X receptor/HNF4 |
ENSSSCP00000031110 | PRINTS | PR00545 | IPR000003 | 392 | 417 | 2.10e-41 | Retinoid X receptor/HNF4 |
ENSSSCP00000031110 | PRINTS | PR00545 | IPR000003 | 418 | 436 | 2.10e-41 | Retinoid X receptor/HNF4 |
ENSSSCP00000031110 | PRINTS | PR00545 | IPR000003 | 459 | 478 | 2.10e-41 | Retinoid X receptor/HNF4 |
ENSSSCP00000031110 | ProSitePatterns | PS00031 | IPR001628 | 204 | 230 | - | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | ProSiteProfiles | PS51030 | IPR001628 | 201 | 276 | 0.00e-00 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | SMART | SM00399 | IPR001628 | 201 | 272 | 1.30e-41 | Zinc finger, nuclear hormone receptor-type |
ENSSSCP00000031110 | SMART | SM00430 | IPR000536 | 340 | 499 | 8.40e-54 | Nuclear hormone receptor, ligand-binding, core |
ENSSSCP00000031110 | SUPERFAMILY | SSF48508 | IPR008946 | 254 | 526 | 0.00e-00 | Nuclear hormone receptor, ligand-binding |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSSSCP00000031110 | PF00104 | 1.6e-39 | Hormone_recep | Ligand-binding domain of nuclear hormone receptor |
ENSSSCP00000031110 | PF00105 | 8.5e-32 | zf-C4 | Zinc finger, C4 type (two domains) |
ENSSSCP00000031110 | PF11825 | 3.2e-06 | Nuc_recep-AF1 | Nuclear/hormone receptor activator site AF-1 |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100354287 | 9597 | Pan paniscus | 100992933 |
9555 | Papio anubis | 101021005 | 9669 | Mustela putorius furo | 101679943 |
59463 | Myotis lucifugus | 102442015 | 9615 | Canis familiaris | 481735 |
8364 | Xenopus tropicalis | 548691 | 9606 | Homo sapiens | 6257 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000001719 | 9913 | Bos taurus | ENSBTAG00000000602 |
9358 | Choloepus hoffmanni | ENSCHOG00000009975 | 9483 | Callithrix jacchus | ENSCJAG00000021619 |
9361 | Dasypus novemcinctus | ENSDNOG00000015431 | 10020 | Dipodomys ordii | ENSDORG00000013816 |
9796 | Equus caballus | ENSECAG00000023041 | 9365 | Erinaceus europaeus | ENSEEUG00000012064 |
9685 | Felis catus | ENSFCAG00000006981 | 9595 | Gorilla gorilla | ENSGGOG00000009823 |
9785 | Loxodonta africana | ENSLAFG00000002141 | 9315 | Macropus eugenii | ENSMEUG00000008618 |
13616 | Monodelphis domestica | ENSMODG00000014249 | 61853 | Nomascus leucogenys | ENSNLEG00000006809 |
30611 | Otolemur garnettii | ENSOGAG00000011689 | 9978 | Ochotona princeps | ENSOPRG00000000905 |
9601 | Pongo abelii | ENSPPYG00000017239 | 9598 | Pan troglodytes | ENSPTRG00000018034 |
132908 | Pteropus vampyrus | ENSPVAG00000001888 | 10116 | Rattus norvegicus | ENSRNOG00000000464 |
9305 | Sarcophilus harrisii | ENSSHAG00000006089 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000027099 |
9739 | Tursiops truncatus | ENSTTRG00000004291 | 39432 | Saimiri boliviensis | 101040304 |
7897 | Latimeria chalumnae | ENSLACG00000006999 | 30608 | Microcebus murinus | ENSMICG00000000899 |
9813 | Procavia capensis | ENSPCAG00000010517 | 37347 | Tupaia belangeri | ENSTBEG00000015312 |
Paralogs | |||
445465 |