Basic Information
Gene ID 317575 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Smarca1
Full Name Protein Smarca1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt D3ZIE5 UniGene Rn.39117
PDB NULL OMIM NULL
KEGG rno:317575 UCSC RGD:1561046

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000060122 Gene3D G3DSA:1.10.10.60 IPR009057 848 902 1.10e-28 Homeodomain-like
ENSRNOP00000060122 Gene3D G3DSA:1.10.10.60 IPR009057 936 1042 6.20e-47 Homeodomain-like
ENSRNOP00000060122 Pfam PF00176 IPR000330 190 470 3.70e-87 SNF2-related
ENSRNOP00000060122 Pfam PF00271 IPR001650 527 604 8.60e-18 Helicase, C-terminal
ENSRNOP00000060122 Pfam PF09110 IPR015194 750 848 3.90e-26 ISWI HAND domain
ENSRNOP00000060122 Pfam PF09111 IPR015195 905 1019 1.20e-43 SLIDE domain
ENSRNOP00000060122 Pfam PF13892 IPR020838 53 117 6.20e-05 DBINO domain
ENSRNOP00000060122 ProSiteProfiles PS51192 IPR014001 199 364 0.00e-00 Helicase, superfamily 1/2, ATP-binding domain
ENSRNOP00000060122 ProSiteProfiles PS51194 IPR001650 494 645 0.00e-00 Helicase, C-terminal
ENSRNOP00000060122 ProSiteProfiles PS51293 IPR017884 847 899 0.00e-00 SANT domain
ENSRNOP00000060122 SMART SM00487 IPR014001 183 375 2.30e-44 Helicase, superfamily 1/2, ATP-binding domain
ENSRNOP00000060122 SMART SM00490 IPR001650 520 604 8.40e-31 Helicase, C-terminal
ENSRNOP00000060122 SMART SM00717 IPR001005 848 897 3.30e-08 SANT/Myb domain
ENSRNOP00000060122 SMART SM00717 IPR001005 950 1014 6.50e-05 SANT/Myb domain
ENSRNOP00000060122 SUPERFAMILY SSF101224 IPR015194 751 850 0.00e-00 ISWI HAND domain
ENSRNOP00000060122 SUPERFAMILY SSF46689 IPR009057 851 901 0.00e-00 Homeodomain-like
ENSRNOP00000060122 SUPERFAMILY SSF46689 IPR009057 903 1027 0.00e-00 Homeodomain-like
ENSRNOP00000060122 SUPERFAMILY SSF52540 IPR027417 175 402 0.00e-00 P-loop containing nucleoside triphosphate hydrolase
ENSRNOP00000060122 SUPERFAMILY SSF52540 IPR027417 404 669 0.00e-00 P-loop containing nucleoside triphosphate hydrolase

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000060122 PF00176 0 SNF2_N SNF2 family N-terminal domain
ENSRNOP00000060122 PF09111 1.20512e-43 SLIDE SLIDE
ENSRNOP00000060122 PF09110 3.9e-26 HAND HAND
ENSRNOP00000060122 PF00271 1.4e-18 Helicase_C Helicase conserved C-terminal domain
ENSRNOP00000060122 PF04851 2.1e-08 ResIII Type III restriction enzyme, res subunit
ENSRNOP00000060122 PF00270 1.7e-07 DEAD DEAD/DEAH box helicase
ENSRNOP00000060122 PF11496 4.5e-07 HDA2-3 Class II histone deacetylase complex subunits 2 and 3
ENSRNOP00000060122 PF13892 6.2e-05 DBINO DNA-binding domain
ENSRNOP00000060122 PF00249 0.00026 Myb_DNA-binding Myb-like DNA-binding domain

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100117522 7029 Acyrthosiphon pisum 100162928
9823 Sus scrofa 100188905 6087 Hydra magnipapillata 100215182
9597 Pan paniscus 100987223 9555 Papio anubis 101000396
39432 Saimiri boliviensis 101037818 7897 Latimeria chalumnae 102345306
13735 Pelodiscus sinensis 102460963 9606 Homo sapiens 1107
6239 Caenorhabditis elegans 175944 30611 Otolemur garnettii 100963648
10141 Cavia porcellus ENSCPOG00000013601 9103 Meleagris gallopavo ENSMGAG00000007042
9544 Macaca mulatta ENSMMUG00000008818 37347 Tupaia belangeri ENSTBEG00000014973
59729 Taeniopygia guttata ENSTGUG00000003899 7227 Drosophila melanogaster 36390
7955 Danio rerio 559803 7070 Tribolium castaneum 660820
7719 Ciona intestinalis 778936 10090 Mus musculus 93761
9646 Ailuropoda melanoleuca ENSAMEG00000015218 9913 Bos taurus ENSBTAG00000002292
9615 Canis familiaris ENSCAFG00000018673 9483 Callithrix jacchus ENSCJAG00000002868
51511 Ciona savignyi ENSCSAVG00000004620 10020 Dipodomys ordii ENSDORG00000009270
9371 Echinops telfairi ENSETEG00000017426 9685 Felis catus ENSFCAG00000018496
9785 Loxodonta africana ENSLAFG00000000896 59463 Myotis lucifugus ENSMLUG00000029614
13616 Monodelphis domestica ENSMODG00000013187 9669 Mustela putorius furo ENSMPUG00000017423
61853 Nomascus leucogenys ENSNLEG00000015179 9258 Ornithorhynchus anatinus ENSOANG00000002862
9986 Oryctolagus cuniculus ENSOCUG00000001047 9813 Procavia capensis ENSPCAG00000001998
7757 Petromyzon marinus ENSPMAG00000006011 9601 Pongo abelii ENSPPYG00000020703
9739 Tursiops truncatus ENSTTRG00000006168 8364 Xenopus tropicalis ENSXETG00000001526

Paralogs
307766 ENSRNOG00000021584